Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2284

Experiment: m.b. copper (II) chloride 0.625 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2283 and B158DRAFT_2284 are separated by 79 nucleotidesB158DRAFT_2284 and B158DRAFT_2285 are separated by 18 nucleotides B158DRAFT_2283: B158DRAFT_2283 - phosphopyruvate hydratase, at 448,759 to 450,033 _2283 B158DRAFT_2284: B158DRAFT_2284 - Septum formation initiator, at 450,113 to 450,418 _2284 B158DRAFT_2285: B158DRAFT_2285 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 450,437 to 451,138 _2285 Position (kb) 450 451Strain fitness (log2 ratio) -2 -1 0 1at 449.981 kb on - strandat 450.378 kb on + strand, within B158DRAFT_2284at 450.395 kb on + strandat 450.395 kb on + strandat 450.395 kb on + strandat 450.413 kb on + strandat 450.425 kb on + strandat 450.427 kb on + strandat 451.156 kb on - strandat 451.158 kb on + strandat 451.166 kb on - strandat 451.166 kb on - strandat 451.166 kb on - strandat 451.178 kb on - strandat 451.318 kb on - strandat 451.318 kb on - strandat 451.346 kb on - strandat 451.409 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
remove
449,981 - +1.4
450,378 + B158DRAFT_2284 0.87 -0.9
450,395 + +0.6
450,395 + +1.0
450,395 + -0.3
450,413 + -1.5
450,425 + -0.1
450,427 + +1.4
451,156 - +0.9
451,158 + -2.1
451,166 - -0.6
451,166 - +0.8
451,166 - -0.8
451,178 - -0.5
451,318 - +0.6
451,318 - -0.2
451,346 - -1.2
451,409 + -1.7

Or see this region's nucleotide sequence