Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2178

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2176 and B158DRAFT_2177 are separated by 83 nucleotidesB158DRAFT_2177 and B158DRAFT_2178 are separated by 29 nucleotidesB158DRAFT_2178 and B158DRAFT_2179 overlap by 10 nucleotides B158DRAFT_2176: B158DRAFT_2176 - folate-binding protein YgfZ, at 323,768 to 324,706 _2176 B158DRAFT_2177: B158DRAFT_2177 - Uncharacterized conserved protein, at 324,790 to 325,044 _2177 B158DRAFT_2178: B158DRAFT_2178 - hypothetical protein, at 325,074 to 325,580 _2178 B158DRAFT_2179: B158DRAFT_2179 - L-aspartate oxidase (EC 1.4.3.16), at 325,571 to 327,187 _2179 Position (kb) 325 326Strain fitness (log2 ratio) -2 -1 0 1 2 3at 324.658 kb on - strandat 324.738 kb on + strandat 324.754 kb on - strandat 324.754 kb on - strandat 325.100 kb on + strandat 325.100 kb on + strandat 325.108 kb on - strandat 325.137 kb on + strand, within B158DRAFT_2178at 325.153 kb on + strand, within B158DRAFT_2178at 325.153 kb on + strand, within B158DRAFT_2178at 325.186 kb on - strand, within B158DRAFT_2178at 325.257 kb on + strand, within B158DRAFT_2178at 325.315 kb on + strand, within B158DRAFT_2178at 325.332 kb on - strand, within B158DRAFT_2178at 325.444 kb on + strand, within B158DRAFT_2178at 325.531 kb on - strandat 325.534 kb on - strandat 325.534 kb on - strandat 325.591 kb on + strandat 325.612 kb on - strandat 325.637 kb on - strandat 325.641 kb on + strandat 325.641 kb on + strandat 325.649 kb on - strandat 325.649 kb on - strandat 325.649 kb on - strandat 325.680 kb on - strandat 325.847 kb on + strand, within B158DRAFT_2179at 325.934 kb on + strand, within B158DRAFT_2179at 325.966 kb on - strand, within B158DRAFT_2179at 325.981 kb on - strand, within B158DRAFT_2179at 326.052 kb on + strand, within B158DRAFT_2179at 326.052 kb on + strand, within B158DRAFT_2179at 326.052 kb on + strand, within B158DRAFT_2179at 326.391 kb on - strand, within B158DRAFT_2179at 326.391 kb on - strand, within B158DRAFT_2179at 326.485 kb on + strand, within B158DRAFT_2179at 326.494 kb on - strand, within B158DRAFT_2179at 326.499 kb on + strand, within B158DRAFT_2179at 326.499 kb on + strand, within B158DRAFT_2179at 326.507 kb on - strand, within B158DRAFT_2179at 326.512 kb on - strand, within B158DRAFT_2179at 326.554 kb on + strand, within B158DRAFT_2179at 326.554 kb on + strand, within B158DRAFT_2179

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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324,658 - +0.9
324,738 + -1.3
324,754 - -0.8
324,754 - +0.4
325,100 + +2.9
325,100 + -1.0
325,108 - +3.2
325,137 + B158DRAFT_2178 0.12 -1.5
325,153 + B158DRAFT_2178 0.16 -0.1
325,153 + B158DRAFT_2178 0.16 -1.1
325,186 - B158DRAFT_2178 0.22 -0.4
325,257 + B158DRAFT_2178 0.36 -1.8
325,315 + B158DRAFT_2178 0.48 +0.5
325,332 - B158DRAFT_2178 0.51 -0.5
325,444 + B158DRAFT_2178 0.73 +2.0
325,531 - +0.2
325,534 - -1.1
325,534 - +0.2
325,591 + -0.1
325,612 - +0.2
325,637 - +0.2
325,641 + +0.3
325,641 + +0.9
325,649 - +0.0
325,649 - +0.2
325,649 - -0.3
325,680 - +0.8
325,847 + B158DRAFT_2179 0.17 +0.1
325,934 + B158DRAFT_2179 0.22 -0.2
325,966 - B158DRAFT_2179 0.24 -0.2
325,981 - B158DRAFT_2179 0.25 +0.3
326,052 + B158DRAFT_2179 0.30 -2.1
326,052 + B158DRAFT_2179 0.30 +0.5
326,052 + B158DRAFT_2179 0.30 +1.1
326,391 - B158DRAFT_2179 0.51 -0.4
326,391 - B158DRAFT_2179 0.51 +1.2
326,485 + B158DRAFT_2179 0.57 +1.0
326,494 - B158DRAFT_2179 0.57 +1.0
326,499 + B158DRAFT_2179 0.57 +1.9
326,499 + B158DRAFT_2179 0.57 +2.1
326,507 - B158DRAFT_2179 0.58 -0.6
326,512 - B158DRAFT_2179 0.58 +0.6
326,554 + B158DRAFT_2179 0.61 -0.9
326,554 + B158DRAFT_2179 0.61 +0.0

Or see this region's nucleotide sequence