Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2133

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2131 and B158DRAFT_2132 are separated by 9 nucleotidesB158DRAFT_2132 and B158DRAFT_2133 are separated by 1 nucleotidesB158DRAFT_2133 and B158DRAFT_2134 are separated by 116 nucleotidesB158DRAFT_2134 and B158DRAFT_2135 are separated by 118 nucleotides B158DRAFT_2131: B158DRAFT_2131 - preprotein translocase, SecA subunit, at 265,322 to 268,030 _2131 B158DRAFT_2132: B158DRAFT_2132 - mutator mutT protein, at 268,040 to 268,426 _2132 B158DRAFT_2133: B158DRAFT_2133 - Uncharacterized protein conserved in bacteria, at 268,428 to 268,625 _2133 B158DRAFT_2134: B158DRAFT_2134 - Negative regulator of beta-lactamase expression, at 268,742 to 269,308 _2134 B158DRAFT_2135: B158DRAFT_2135 - nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19), at 269,427 to 270,296 _2135 Position (kb) 268 269Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 267.837 kb on - strandat 267.880 kb on + strandat 267.880 kb on + strandat 267.880 kb on + strandat 267.888 kb on - strandat 267.915 kb on + strandat 267.915 kb on - strandat 267.934 kb on - strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.949 kb on + strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.957 kb on - strandat 267.986 kb on - strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.068 kb on + strandat 268.076 kb on - strandat 268.076 kb on - strandat 268.076 kb on - strandat 268.251 kb on - strand, within B158DRAFT_2132at 268.261 kb on - strand, within B158DRAFT_2132at 268.266 kb on - strand, within B158DRAFT_2132at 268.298 kb on + strand, within B158DRAFT_2132at 268.333 kb on - strand, within B158DRAFT_2132at 268.334 kb on - strand, within B158DRAFT_2132at 268.348 kb on - strand, within B158DRAFT_2132at 268.541 kb on - strand, within B158DRAFT_2133at 268.594 kb on + strand, within B158DRAFT_2133at 268.659 kb on - strandat 268.695 kb on - strandat 268.728 kb on + strandat 268.730 kb on + strandat 268.736 kb on - strandat 268.736 kb on - strandat 268.736 kb on - strandat 268.738 kb on + strandat 268.788 kb on - strandat 268.788 kb on - strandat 268.788 kb on - strandat 268.893 kb on - strand, within B158DRAFT_2134at 268.893 kb on - strand, within B158DRAFT_2134at 268.894 kb on + strand, within B158DRAFT_2134at 268.909 kb on + strand, within B158DRAFT_2134at 268.923 kb on + strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.931 kb on - strand, within B158DRAFT_2134at 268.932 kb on + strand, within B158DRAFT_2134at 268.932 kb on - strand, within B158DRAFT_2134at 268.965 kb on + strand, within B158DRAFT_2134at 269.051 kb on + strand, within B158DRAFT_2134at 269.059 kb on - strand, within B158DRAFT_2134at 269.080 kb on - strand, within B158DRAFT_2134at 269.107 kb on + strand, within B158DRAFT_2134at 269.131 kb on + strand, within B158DRAFT_2134at 269.197 kb on + strand, within B158DRAFT_2134at 269.197 kb on + strand, within B158DRAFT_2134at 269.197 kb on + strand, within B158DRAFT_2134at 269.197 kb on + strand, within B158DRAFT_2134at 269.205 kb on - strand, within B158DRAFT_2134at 269.205 kb on - strand, within B158DRAFT_2134at 269.205 kb on - strand, within B158DRAFT_2134at 269.205 kb on - strand, within B158DRAFT_2134at 269.242 kb on - strand, within B158DRAFT_2134at 269.260 kb on - strandat 269.329 kb on - strandat 269.390 kb on + strandat 269.413 kb on + strandat 269.413 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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267,837 - +0.4
267,880 + +1.4
267,880 + -0.2
267,880 + -0.9
267,888 - +7.7
267,915 + +0.3
267,915 - +7.6
267,934 - -0.3
267,949 + +0.3
267,949 + -1.4
267,949 + -0.2
267,949 + +1.4
267,957 - -1.0
267,957 - +0.5
267,957 - -0.6
267,957 - +3.4
267,957 - +5.6
267,986 - +0.9
268,068 + +1.1
268,068 + -0.6
268,068 + -0.5
268,068 + +2.1
268,068 + +3.5
268,076 - +0.3
268,076 - +4.6
268,076 - +0.1
268,251 - B158DRAFT_2132 0.55 -0.7
268,261 - B158DRAFT_2132 0.57 -0.5
268,266 - B158DRAFT_2132 0.58 +0.2
268,298 + B158DRAFT_2132 0.67 +1.0
268,333 - B158DRAFT_2132 0.76 -1.3
268,334 - B158DRAFT_2132 0.76 -0.0
268,348 - B158DRAFT_2132 0.80 -0.7
268,541 - B158DRAFT_2133 0.57 +2.1
268,594 + B158DRAFT_2133 0.84 -2.1
268,659 - -0.1
268,695 - +1.8
268,728 + +1.5
268,730 + +0.4
268,736 - -0.4
268,736 - +0.9
268,736 - +0.8
268,738 + +2.3
268,788 - +2.7
268,788 - +1.8
268,788 - +1.3
268,893 - B158DRAFT_2134 0.27 +1.5
268,893 - B158DRAFT_2134 0.27 -0.1
268,894 + B158DRAFT_2134 0.27 +2.1
268,909 + B158DRAFT_2134 0.29 +1.2
268,923 + B158DRAFT_2134 0.32 +0.2
268,931 - B158DRAFT_2134 0.33 +3.4
268,931 - B158DRAFT_2134 0.33 +3.0
268,931 - B158DRAFT_2134 0.33 +2.7
268,932 + B158DRAFT_2134 0.34 +3.4
268,932 - B158DRAFT_2134 0.34 +5.0
268,965 + B158DRAFT_2134 0.39 +2.4
269,051 + B158DRAFT_2134 0.54 +2.4
269,059 - B158DRAFT_2134 0.56 +2.2
269,080 - B158DRAFT_2134 0.60 +5.0
269,107 + B158DRAFT_2134 0.64 +1.2
269,131 + B158DRAFT_2134 0.69 +2.7
269,197 + B158DRAFT_2134 0.80 +2.4
269,197 + B158DRAFT_2134 0.80 -1.5
269,197 + B158DRAFT_2134 0.80 +1.4
269,197 + B158DRAFT_2134 0.80 +2.2
269,205 - B158DRAFT_2134 0.82 +1.5
269,205 - B158DRAFT_2134 0.82 +4.0
269,205 - B158DRAFT_2134 0.82 +4.0
269,205 - B158DRAFT_2134 0.82 +2.4
269,242 - B158DRAFT_2134 0.88 +3.4
269,260 - +2.9
269,329 - +5.0
269,390 + +1.5
269,413 + +1.5
269,413 + -0.2

Or see this region's nucleotide sequence