Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2052 and B158DRAFT_2053 are separated by 29 nucleotides B158DRAFT_2053 and B158DRAFT_2054 are separated by 125 nucleotides B158DRAFT_2054 and B158DRAFT_2055 are separated by 516 nucleotides
B158DRAFT_2052: B158DRAFT_2052 - GTP-binding protein YchF, at 185,914 to 187,005
_2052
B158DRAFT_2053: B158DRAFT_2053 - peptidyl-tRNA hydrolase, at 187,035 to 187,628
_2053
B158DRAFT_2054: B158DRAFT_2054 - ribosomal protein L25, Ctc-form, at 187,754 to 188,431
_2054
B158DRAFT_2055: B158DRAFT_2055 - DNA-binding winged-HTH domains, at 188,948 to 190,231
_2055
Position (kb) 187
188
189 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 186.766 kb on - strand, within B158DRAFT_2052 at 186.869 kb on - strand, within B158DRAFT_2052 at 186.891 kb on + strand, within B158DRAFT_2052 at 186.899 kb on - strand at 186.910 kb on + strand at 186.944 kb on + strand at 186.944 kb on + strand at 186.945 kb on - strand at 186.949 kb on + strand at 186.952 kb on - strand at 186.962 kb on - strand at 187.014 kb on - strand at 187.049 kb on + strand at 187.049 kb on + strand at 187.057 kb on - strand at 187.057 kb on - strand at 187.075 kb on + strand at 187.075 kb on + strand at 187.075 kb on + strand at 187.075 kb on + strand at 187.075 kb on + strand at 187.075 kb on + strand at 187.083 kb on - strand at 187.083 kb on - strand at 187.101 kb on + strand, within B158DRAFT_2053 at 187.628 kb on - strand at 187.651 kb on - strand at 187.760 kb on - strand at 187.865 kb on - strand, within B158DRAFT_2054 at 187.889 kb on + strand, within B158DRAFT_2054 at 187.897 kb on - strand, within B158DRAFT_2054 at 187.957 kb on - strand, within B158DRAFT_2054 at 187.969 kb on + strand, within B158DRAFT_2054 at 187.969 kb on + strand, within B158DRAFT_2054 at 188.037 kb on - strand, within B158DRAFT_2054 at 188.102 kb on + strand, within B158DRAFT_2054 at 188.102 kb on + strand, within B158DRAFT_2054 at 188.693 kb on + strand at 188.693 kb on + strand at 188.693 kb on + strand at 188.693 kb on + strand at 188.701 kb on - strand at 188.701 kb on - strand at 188.701 kb on - strand at 188.701 kb on - strand at 188.701 kb on - strand at 188.701 kb on - strand at 188.758 kb on - strand at 188.796 kb on - strand at 188.893 kb on - strand at 188.933 kb on - strand at 188.937 kb on - strand at 188.990 kb on - strand at 189.016 kb on + strand at 189.022 kb on - strand at 189.024 kb on + strand at 189.024 kb on + strand at 189.024 kb on - strand at 189.032 kb on - strand at 189.039 kb on + strand at 189.047 kb on - strand at 189.076 kb on + strand at 189.083 kb on + strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.091 kb on - strand, within B158DRAFT_2055 at 189.227 kb on + strand, within B158DRAFT_2055 at 189.264 kb on + strand, within B158DRAFT_2055 at 189.264 kb on + strand, within B158DRAFT_2055 at 189.272 kb on - strand, within B158DRAFT_2055 at 189.272 kb on - strand, within B158DRAFT_2055 at 189.324 kb on - strand, within B158DRAFT_2055 at 189.324 kb on - strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.375 kb on + strand, within B158DRAFT_2055 at 189.380 kb on + strand, within B158DRAFT_2055 at 189.383 kb on - strand, within B158DRAFT_2055 at 189.383 kb on - strand, within B158DRAFT_2055 at 189.383 kb on - strand, within B158DRAFT_2055 at 189.383 kb on - strand, within B158DRAFT_2055 at 189.383 kb on - strand, within B158DRAFT_2055 at 189.400 kb on + strand, within B158DRAFT_2055 at 189.410 kb on - strand, within B158DRAFT_2055 at 189.410 kb on - strand, within B158DRAFT_2055 at 189.410 kb on - strand, within B158DRAFT_2055
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 186,766 - B158DRAFT_2052 0.78 +2.2 186,869 - B158DRAFT_2052 0.87 -1.5 186,891 + B158DRAFT_2052 0.89 -1.2 186,899 - +0.1 186,910 + +1.7 186,944 + +1.3 186,944 + -2.0 186,945 - +0.9 186,949 + +3.0 186,952 - +0.9 186,962 - +1.4 187,014 - +1.4 187,049 + +0.4 187,049 + -0.8 187,057 - -2.1 187,057 - -0.5 187,075 + +1.5 187,075 + -0.5 187,075 + +3.0 187,075 + +1.6 187,075 + -0.8 187,075 + +0.8 187,083 - -0.4 187,083 - -0.0 187,101 + B158DRAFT_2053 0.11 +1.3 187,628 - +0.3 187,651 - -1.3 187,760 - +3.4 187,865 - B158DRAFT_2054 0.16 -0.8 187,889 + B158DRAFT_2054 0.20 +0.0 187,897 - B158DRAFT_2054 0.21 -0.1 187,957 - B158DRAFT_2054 0.30 +0.6 187,969 + B158DRAFT_2054 0.32 +3.4 187,969 + B158DRAFT_2054 0.32 +1.5 188,037 - B158DRAFT_2054 0.42 +3.6 188,102 + B158DRAFT_2054 0.51 +2.8 188,102 + B158DRAFT_2054 0.51 -0.8 188,693 + -0.2 188,693 + -0.0 188,693 + -0.7 188,693 + -0.7 188,701 - +0.2 188,701 - -0.7 188,701 - +0.7 188,701 - -1.0 188,701 - +0.2 188,701 - +0.6 188,758 - +0.3 188,796 - -0.6 188,893 - -2.0 188,933 - -0.7 188,937 - +0.5 188,990 - -0.3 189,016 + -1.2 189,022 - -1.3 189,024 + -1.3 189,024 + -0.1 189,024 - -2.1 189,032 - -0.1 189,039 + +0.2 189,047 - +0.8 189,076 + -0.3 189,083 + B158DRAFT_2055 0.11 +3.0 189,091 - B158DRAFT_2055 0.11 -2.1 189,091 - B158DRAFT_2055 0.11 -0.0 189,091 - B158DRAFT_2055 0.11 -0.3 189,091 - B158DRAFT_2055 0.11 -0.8 189,091 - B158DRAFT_2055 0.11 -0.5 189,091 - B158DRAFT_2055 0.11 +0.4 189,227 + B158DRAFT_2055 0.22 -2.5 189,264 + B158DRAFT_2055 0.25 +0.6 189,264 + B158DRAFT_2055 0.25 -2.5 189,272 - B158DRAFT_2055 0.25 -1.0 189,272 - B158DRAFT_2055 0.25 -2.2 189,324 - B158DRAFT_2055 0.29 +1.7 189,324 - B158DRAFT_2055 0.29 -0.8 189,375 + B158DRAFT_2055 0.33 -0.4 189,375 + B158DRAFT_2055 0.33 +0.0 189,375 + B158DRAFT_2055 0.33 -1.3 189,375 + B158DRAFT_2055 0.33 -0.4 189,375 + B158DRAFT_2055 0.33 -0.3 189,375 + B158DRAFT_2055 0.33 +0.2 189,380 + B158DRAFT_2055 0.34 -2.4 189,383 - B158DRAFT_2055 0.34 -0.7 189,383 - B158DRAFT_2055 0.34 -0.8 189,383 - B158DRAFT_2055 0.34 -0.2 189,383 - B158DRAFT_2055 0.34 -0.5 189,383 - B158DRAFT_2055 0.34 -1.4 189,400 + B158DRAFT_2055 0.35 +0.3 189,410 - B158DRAFT_2055 0.36 -0.8 189,410 - B158DRAFT_2055 0.36 -0.7 189,410 - B158DRAFT_2055 0.36 +0.2
Or see this region's nucleotide sequence