Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2022

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2021 and B158DRAFT_2022 are separated by 439 nucleotidesB158DRAFT_2022 and B158DRAFT_2023 are separated by 99 nucleotides B158DRAFT_2021: B158DRAFT_2021 - Outer membrane phospholipase A, at 150,003 to 151,283 _2021 B158DRAFT_2022: B158DRAFT_2022 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 151,723 to 153,150 _2022 B158DRAFT_2023: B158DRAFT_2023 - Zn-dependent hydrolases, including glyoxylases, at 153,250 to 154,173 _2023 Position (kb) 151 152 153 154Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 150.732 kb on + strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.739 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.752 kb on - strand, within B158DRAFT_2021at 150.847 kb on - strand, within B158DRAFT_2021at 150.871 kb on - strand, within B158DRAFT_2021at 150.879 kb on + strand, within B158DRAFT_2021at 150.887 kb on - strand, within B158DRAFT_2021at 150.935 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.990 kb on + strand, within B158DRAFT_2021at 151.009 kb on - strand, within B158DRAFT_2021at 151.085 kb on - strand, within B158DRAFT_2021at 151.089 kb on + strand, within B158DRAFT_2021at 151.100 kb on - strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.142 kb on + strand, within B158DRAFT_2021at 151.143 kb on + strand, within B158DRAFT_2021at 151.150 kb on - strand, within B158DRAFT_2021at 151.218 kb on - strandat 151.218 kb on - strandat 151.224 kb on + strandat 151.246 kb on + strandat 151.266 kb on - strandat 151.364 kb on + strandat 151.377 kb on - strandat 151.386 kb on + strandat 151.386 kb on + strandat 151.394 kb on - strandat 151.517 kb on - strandat 151.576 kb on + strandat 151.590 kb on + strandat 151.668 kb on - strandat 151.706 kb on - strandat 151.723 kb on - strandat 151.724 kb on - strandat 151.724 kb on - strandat 151.829 kb on + strandat 151.855 kb on - strandat 151.886 kb on + strand, within B158DRAFT_2022at 151.928 kb on + strand, within B158DRAFT_2022at 151.971 kb on - strand, within B158DRAFT_2022at 152.053 kb on + strand, within B158DRAFT_2022at 152.110 kb on - strand, within B158DRAFT_2022at 152.195 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.450 kb on - strand, within B158DRAFT_2022at 152.455 kb on + strand, within B158DRAFT_2022at 152.455 kb on + strand, within B158DRAFT_2022at 152.458 kb on - strand, within B158DRAFT_2022at 152.463 kb on - strand, within B158DRAFT_2022at 152.467 kb on + strand, within B158DRAFT_2022at 152.523 kb on + strand, within B158DRAFT_2022at 152.523 kb on + strand, within B158DRAFT_2022at 152.531 kb on - strand, within B158DRAFT_2022at 152.531 kb on - strand, within B158DRAFT_2022at 152.544 kb on + strand, within B158DRAFT_2022at 152.573 kb on - strand, within B158DRAFT_2022at 152.590 kb on - strand, within B158DRAFT_2022at 152.624 kb on - strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.639 kb on - strand, within B158DRAFT_2022at 152.641 kb on + strand, within B158DRAFT_2022at 152.646 kb on + strand, within B158DRAFT_2022at 152.664 kb on - strand, within B158DRAFT_2022at 152.686 kb on + strand, within B158DRAFT_2022at 152.728 kb on + strand, within B158DRAFT_2022at 152.729 kb on + strand, within B158DRAFT_2022at 152.736 kb on - strand, within B158DRAFT_2022at 152.738 kb on + strand, within B158DRAFT_2022at 152.810 kb on - strand, within B158DRAFT_2022at 152.865 kb on - strand, within B158DRAFT_2022at 152.865 kb on - strand, within B158DRAFT_2022at 152.892 kb on - strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 153.012 kb on + strandat 153.022 kb on + strandat 153.027 kb on + strandat 153.127 kb on + strandat 153.175 kb on - strandat 153.211 kb on + strandat 153.315 kb on - strandat 153.326 kb on - strandat 153.336 kb on - strandat 153.350 kb on + strand, within B158DRAFT_2023at 153.353 kb on - strand, within B158DRAFT_2023at 153.357 kb on - strand, within B158DRAFT_2023at 153.376 kb on + strand, within B158DRAFT_2023at 153.381 kb on + strand, within B158DRAFT_2023at 153.435 kb on + strand, within B158DRAFT_2023at 153.480 kb on - strand, within B158DRAFT_2023at 153.613 kb on - strand, within B158DRAFT_2023at 153.709 kb on + strand, within B158DRAFT_2023at 153.734 kb on + strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.780 kb on + strand, within B158DRAFT_2023at 153.782 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.826 kb on + strand, within B158DRAFT_2023at 153.831 kb on + strand, within B158DRAFT_2023at 153.834 kb on - strand, within B158DRAFT_2023at 153.874 kb on + strand, within B158DRAFT_2023at 153.903 kb on - strand, within B158DRAFT_2023at 153.973 kb on + strand, within B158DRAFT_2023

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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150,732 + B158DRAFT_2021 0.57 +0.8
150,732 + B158DRAFT_2021 0.57 -1.5
150,739 + B158DRAFT_2021 0.57 +0.1
150,744 + B158DRAFT_2021 0.58 +0.6
150,744 + B158DRAFT_2021 0.58 +0.2
150,744 + B158DRAFT_2021 0.58 +0.2
150,744 + B158DRAFT_2021 0.58 -0.7
150,747 - B158DRAFT_2021 0.58 -1.1
150,747 - B158DRAFT_2021 0.58 -0.2
150,752 - B158DRAFT_2021 0.58 -1.5
150,847 - B158DRAFT_2021 0.66 -2.2
150,871 - B158DRAFT_2021 0.68 -0.3
150,879 + B158DRAFT_2021 0.68 +0.2
150,887 - B158DRAFT_2021 0.69 -0.8
150,935 + B158DRAFT_2021 0.73 +0.6
150,940 + B158DRAFT_2021 0.73 -1.1
150,940 + B158DRAFT_2021 0.73 +0.0
150,940 + B158DRAFT_2021 0.73 -0.3
150,948 - B158DRAFT_2021 0.74 +0.6
150,948 - B158DRAFT_2021 0.74 -0.2
150,948 - B158DRAFT_2021 0.74 +2.7
150,948 - B158DRAFT_2021 0.74 -0.6
150,950 + B158DRAFT_2021 0.74 +0.7
150,950 + B158DRAFT_2021 0.74 +2.8
150,950 + B158DRAFT_2021 0.74 -0.7
150,958 - B158DRAFT_2021 0.75 -0.4
150,958 - B158DRAFT_2021 0.75 -1.3
150,958 - B158DRAFT_2021 0.75 -1.0
150,958 - B158DRAFT_2021 0.75 -1.5
150,958 - B158DRAFT_2021 0.75 -0.4
150,958 - B158DRAFT_2021 0.75 -0.1
150,990 + B158DRAFT_2021 0.77 -2.2
151,009 - B158DRAFT_2021 0.79 -0.2
151,085 - B158DRAFT_2021 0.84 -0.3
151,089 + B158DRAFT_2021 0.85 -0.7
151,100 - B158DRAFT_2021 0.86 -1.8
151,137 + B158DRAFT_2021 0.89 -1.6
151,137 + B158DRAFT_2021 0.89 +0.5
151,142 + B158DRAFT_2021 0.89 -1.5
151,143 + B158DRAFT_2021 0.89 -1.0
151,150 - B158DRAFT_2021 0.90 -0.9
151,218 - +0.2
151,218 - +0.1
151,224 + +0.2
151,246 + -1.6
151,266 - -0.2
151,364 + -0.3
151,377 - +0.1
151,386 + -0.4
151,386 + -0.8
151,394 - +0.1
151,517 - +1.5
151,576 + +1.8
151,590 + -0.1
151,668 - -0.5
151,706 - +2.4
151,723 - -1.8
151,724 - -0.3
151,724 - -1.3
151,829 + -0.1
151,855 - -1.6
151,886 + B158DRAFT_2022 0.11 -0.8
151,928 + B158DRAFT_2022 0.14 -1.8
151,971 - B158DRAFT_2022 0.17 +0.2
152,053 + B158DRAFT_2022 0.23 -0.6
152,110 - B158DRAFT_2022 0.27 -0.0
152,195 + B158DRAFT_2022 0.33 -0.8
152,407 + B158DRAFT_2022 0.48 -1.1
152,407 + B158DRAFT_2022 0.48 +0.4
152,407 + B158DRAFT_2022 0.48 -0.2
152,407 + B158DRAFT_2022 0.48 -1.8
152,407 + B158DRAFT_2022 0.48 -0.9
152,407 + B158DRAFT_2022 0.48 +2.7
152,407 + B158DRAFT_2022 0.48 -0.6
152,407 + B158DRAFT_2022 0.48 +0.3
152,407 + B158DRAFT_2022 0.48 -0.9
152,407 + B158DRAFT_2022 0.48 +0.2
152,407 + B158DRAFT_2022 0.48 +1.3
152,407 + B158DRAFT_2022 0.48 -0.8
152,407 + B158DRAFT_2022 0.48 -0.4
152,407 + B158DRAFT_2022 0.48 -0.5
152,415 - B158DRAFT_2022 0.48 -1.2
152,415 - B158DRAFT_2022 0.48 -0.2
152,415 - B158DRAFT_2022 0.48 -1.4
152,415 - B158DRAFT_2022 0.48 +3.1
152,415 - B158DRAFT_2022 0.48 -2.8
152,415 - B158DRAFT_2022 0.48 +1.0
152,415 - B158DRAFT_2022 0.48 -0.6
152,415 - B158DRAFT_2022 0.48 -0.2
152,415 - B158DRAFT_2022 0.48 -1.2
152,415 - B158DRAFT_2022 0.48 -1.9
152,415 - B158DRAFT_2022 0.48 -0.3
152,415 - B158DRAFT_2022 0.48 -0.3
152,415 - B158DRAFT_2022 0.48 -0.1
152,450 - B158DRAFT_2022 0.51 +0.3
152,455 + B158DRAFT_2022 0.51 -0.1
152,455 + B158DRAFT_2022 0.51 +0.6
152,458 - B158DRAFT_2022 0.51 +0.0
152,463 - B158DRAFT_2022 0.52 -0.1
152,467 + B158DRAFT_2022 0.52 -0.1
152,523 + B158DRAFT_2022 0.56 -0.8
152,523 + B158DRAFT_2022 0.56 +0.5
152,531 - B158DRAFT_2022 0.57 +1.7
152,531 - B158DRAFT_2022 0.57 +0.4
152,544 + B158DRAFT_2022 0.57 +0.8
152,573 - B158DRAFT_2022 0.60 -0.8
152,590 - B158DRAFT_2022 0.61 -1.3
152,624 - B158DRAFT_2022 0.63 -0.7
152,631 + B158DRAFT_2022 0.64 -0.5
152,631 + B158DRAFT_2022 0.64 -0.0
152,631 + B158DRAFT_2022 0.64 -1.2
152,631 + B158DRAFT_2022 0.64 -1.3
152,631 + B158DRAFT_2022 0.64 -0.4
152,631 + B158DRAFT_2022 0.64 -1.3
152,631 + B158DRAFT_2022 0.64 -0.9
152,631 + B158DRAFT_2022 0.64 -0.7
152,631 + B158DRAFT_2022 0.64 -0.8
152,631 + B158DRAFT_2022 0.64 -0.3
152,631 + B158DRAFT_2022 0.64 -0.3
152,631 + B158DRAFT_2022 0.64 -0.4
152,631 + B158DRAFT_2022 0.64 -0.1
152,631 + B158DRAFT_2022 0.64 -0.5
152,639 - B158DRAFT_2022 0.64 -0.3
152,641 + B158DRAFT_2022 0.64 -0.1
152,646 + B158DRAFT_2022 0.65 -0.6
152,664 - B158DRAFT_2022 0.66 -1.3
152,686 + B158DRAFT_2022 0.67 -1.0
152,728 + B158DRAFT_2022 0.70 -0.0
152,729 + B158DRAFT_2022 0.70 -1.1
152,736 - B158DRAFT_2022 0.71 -1.2
152,738 + B158DRAFT_2022 0.71 -1.8
152,810 - B158DRAFT_2022 0.76 -2.5
152,865 - B158DRAFT_2022 0.80 -1.5
152,865 - B158DRAFT_2022 0.80 -0.3
152,892 - B158DRAFT_2022 0.82 -1.3
152,971 + B158DRAFT_2022 0.87 +6.4
152,971 + B158DRAFT_2022 0.87 -0.8
152,971 + B158DRAFT_2022 0.87 -2.5
152,971 + B158DRAFT_2022 0.87 +0.2
152,971 + B158DRAFT_2022 0.87 -1.3
152,971 + B158DRAFT_2022 0.87 -1.4
152,971 + B158DRAFT_2022 0.87 -0.7
152,979 - B158DRAFT_2022 0.88 +0.8
152,979 - B158DRAFT_2022 0.88 +1.1
152,979 - B158DRAFT_2022 0.88 -1.9
153,012 + -1.2
153,022 + -0.7
153,027 + -2.3
153,127 + +2.3
153,175 - +0.8
153,211 + -0.8
153,315 - +2.4
153,326 - -0.8
153,336 - +1.6
153,350 + B158DRAFT_2023 0.11 -0.7
153,353 - B158DRAFT_2023 0.11 -1.0
153,357 - B158DRAFT_2023 0.12 -0.3
153,376 + B158DRAFT_2023 0.14 +0.1
153,381 + B158DRAFT_2023 0.14 -1.2
153,435 + B158DRAFT_2023 0.20 -0.4
153,480 - B158DRAFT_2023 0.25 +0.1
153,613 - B158DRAFT_2023 0.39 -1.9
153,709 + B158DRAFT_2023 0.50 -0.0
153,734 + B158DRAFT_2023 0.52 -0.9
153,742 - B158DRAFT_2023 0.53 +0.2
153,742 - B158DRAFT_2023 0.53 +0.4
153,780 + B158DRAFT_2023 0.57 -2.8
153,782 - B158DRAFT_2023 0.58 -0.5
153,788 - B158DRAFT_2023 0.58 -0.4
153,788 - B158DRAFT_2023 0.58 +0.4
153,826 + B158DRAFT_2023 0.62 -0.3
153,831 + B158DRAFT_2023 0.63 -3.0
153,834 - B158DRAFT_2023 0.63 +0.3
153,874 + B158DRAFT_2023 0.68 -0.9
153,903 - B158DRAFT_2023 0.71 -0.7
153,973 + B158DRAFT_2023 0.78 -1.2

Or see this region's nucleotide sequence