Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2019

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2018 and B158DRAFT_2019 overlap by 35 nucleotidesB158DRAFT_2019 and B158DRAFT_2020 are separated by 109 nucleotidesB158DRAFT_2020 and B158DRAFT_2021 are separated by 27 nucleotides B158DRAFT_2018: B158DRAFT_2018 - tRNA dihydrouridine synthase A, at 147,421 to 148,380 _2018 B158DRAFT_2019: B158DRAFT_2019 - hypothetical protein, at 148,346 to 149,326 _2019 B158DRAFT_2020: B158DRAFT_2020 - Polyketide cyclase / dehydrase and lipid transport., at 149,436 to 149,975 _2020 B158DRAFT_2021: B158DRAFT_2021 - Outer membrane phospholipase A, at 150,003 to 151,283 _2021 Position (kb) 148 149 150Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 147.391 kb on + strandat 147.391 kb on + strandat 147.392 kb on - strandat 147.399 kb on - strandat 147.399 kb on - strandat 147.399 kb on - strandat 147.424 kb on - strandat 147.424 kb on - strandat 147.426 kb on + strandat 147.426 kb on + strandat 147.431 kb on + strandat 147.434 kb on - strandat 147.434 kb on - strandat 147.434 kb on - strandat 147.434 kb on - strandat 147.434 kb on - strandat 147.434 kb on - strandat 147.440 kb on + strandat 147.475 kb on - strandat 147.475 kb on - strandat 147.482 kb on - strandat 147.483 kb on + strandat 147.483 kb on + strandat 147.483 kb on + strandat 147.483 kb on + strandat 147.483 kb on + strandat 147.483 kb on + strandat 147.491 kb on - strandat 147.491 kb on - strandat 147.491 kb on - strandat 147.491 kb on - strandat 147.491 kb on - strandat 147.522 kb on + strand, within B158DRAFT_2018at 147.574 kb on + strand, within B158DRAFT_2018at 147.574 kb on + strand, within B158DRAFT_2018at 147.624 kb on - strand, within B158DRAFT_2018at 147.668 kb on + strand, within B158DRAFT_2018at 147.682 kb on + strand, within B158DRAFT_2018at 147.738 kb on + strand, within B158DRAFT_2018at 147.738 kb on + strand, within B158DRAFT_2018at 147.746 kb on - strand, within B158DRAFT_2018at 147.815 kb on + strand, within B158DRAFT_2018at 147.815 kb on + strand, within B158DRAFT_2018at 147.815 kb on + strand, within B158DRAFT_2018at 147.870 kb on - strand, within B158DRAFT_2018at 147.937 kb on - strand, within B158DRAFT_2018at 148.016 kb on + strand, within B158DRAFT_2018at 148.019 kb on - strand, within B158DRAFT_2018at 148.024 kb on - strand, within B158DRAFT_2018at 148.034 kb on - strand, within B158DRAFT_2018at 148.080 kb on + strand, within B158DRAFT_2018at 148.307 kb on + strandat 148.312 kb on + strandat 148.313 kb on + strandat 148.321 kb on - strandat 148.321 kb on - strandat 148.395 kb on - strandat 148.397 kb on + strandat 148.397 kb on + strandat 148.407 kb on - strandat 148.501 kb on + strand, within B158DRAFT_2019at 148.611 kb on + strand, within B158DRAFT_2019at 148.651 kb on - strand, within B158DRAFT_2019at 148.658 kb on - strand, within B158DRAFT_2019at 148.658 kb on - strand, within B158DRAFT_2019at 148.670 kb on - strand, within B158DRAFT_2019at 148.680 kb on - strand, within B158DRAFT_2019at 148.804 kb on + strand, within B158DRAFT_2019at 148.812 kb on - strand, within B158DRAFT_2019at 148.816 kb on - strand, within B158DRAFT_2019at 148.830 kb on + strand, within B158DRAFT_2019at 148.914 kb on - strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.225 kb on + strand, within B158DRAFT_2019at 149.247 kb on - strandat 149.247 kb on - strandat 149.269 kb on + strandat 149.288 kb on - strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.544 kb on - strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.573 kb on - strand, within B158DRAFT_2020at 149.641 kb on + strand, within B158DRAFT_2020at 149.652 kb on + strand, within B158DRAFT_2020at 149.657 kb on + strand, within B158DRAFT_2020at 149.664 kb on + strand, within B158DRAFT_2020at 149.710 kb on + strand, within B158DRAFT_2020at 149.844 kb on + strand, within B158DRAFT_2020at 149.852 kb on - strand, within B158DRAFT_2020at 149.892 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.914 kb on - strand, within B158DRAFT_2020at 149.961 kb on + strandat 149.964 kb on + strandat 149.969 kb on - strandat 149.969 kb on - strandat 149.989 kb on - strandat 150.007 kb on + strandat 150.124 kb on + strandat 150.133 kb on - strand, within B158DRAFT_2021at 150.142 kb on + strand, within B158DRAFT_2021at 150.266 kb on - strand, within B158DRAFT_2021at 150.268 kb on + strand, within B158DRAFT_2021at 150.276 kb on - strand, within B158DRAFT_2021

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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147,391 + +0.2
147,391 + -0.0
147,392 - +0.4
147,399 - +0.5
147,399 - +0.6
147,399 - -1.7
147,424 - -1.5
147,424 - -0.4
147,426 + -0.6
147,426 + +0.5
147,431 + -1.6
147,434 - +1.2
147,434 - -0.5
147,434 - -0.9
147,434 - -0.3
147,434 - -0.9
147,434 - -1.1
147,440 + +0.0
147,475 - -0.5
147,475 - +1.7
147,482 - -0.3
147,483 + -0.8
147,483 + +1.0
147,483 + +0.3
147,483 + +0.5
147,483 + -0.7
147,483 + -0.4
147,491 - -1.1
147,491 - -0.8
147,491 - -1.1
147,491 - +1.2
147,491 - -2.1
147,522 + B158DRAFT_2018 0.11 +0.9
147,574 + B158DRAFT_2018 0.16 +0.0
147,574 + B158DRAFT_2018 0.16 -0.4
147,624 - B158DRAFT_2018 0.21 +1.7
147,668 + B158DRAFT_2018 0.26 -1.7
147,682 + B158DRAFT_2018 0.27 -0.1
147,738 + B158DRAFT_2018 0.33 -0.8
147,738 + B158DRAFT_2018 0.33 -1.0
147,746 - B158DRAFT_2018 0.34 +0.0
147,815 + B158DRAFT_2018 0.41 -0.8
147,815 + B158DRAFT_2018 0.41 +1.8
147,815 + B158DRAFT_2018 0.41 +1.8
147,870 - B158DRAFT_2018 0.47 -2.4
147,937 - B158DRAFT_2018 0.54 -0.2
148,016 + B158DRAFT_2018 0.62 -0.8
148,019 - B158DRAFT_2018 0.62 +0.7
148,024 - B158DRAFT_2018 0.63 -1.5
148,034 - B158DRAFT_2018 0.64 -1.8
148,080 + B158DRAFT_2018 0.69 -0.3
148,307 + -0.9
148,312 + -1.0
148,313 + -0.2
148,321 - -0.2
148,321 - +1.4
148,395 - -1.3
148,397 + +0.7
148,397 + -1.3
148,407 - -0.5
148,501 + B158DRAFT_2019 0.16 +1.0
148,611 + B158DRAFT_2019 0.27 -1.3
148,651 - B158DRAFT_2019 0.31 -0.9
148,658 - B158DRAFT_2019 0.32 -0.7
148,658 - B158DRAFT_2019 0.32 -0.2
148,670 - B158DRAFT_2019 0.33 -1.3
148,680 - B158DRAFT_2019 0.34 +5.0
148,804 + B158DRAFT_2019 0.47 -1.3
148,812 - B158DRAFT_2019 0.48 -0.5
148,816 - B158DRAFT_2019 0.48 -0.3
148,830 + B158DRAFT_2019 0.49 -0.1
148,914 - B158DRAFT_2019 0.58 -0.6
149,134 + B158DRAFT_2019 0.80 +0.2
149,134 + B158DRAFT_2019 0.80 +0.6
149,134 + B158DRAFT_2019 0.80 -1.1
149,134 + B158DRAFT_2019 0.80 -0.0
149,134 + B158DRAFT_2019 0.80 -2.2
149,134 + B158DRAFT_2019 0.80 +0.3
149,142 - B158DRAFT_2019 0.81 +0.7
149,142 - B158DRAFT_2019 0.81 +0.0
149,142 - B158DRAFT_2019 0.81 -1.6
149,225 + B158DRAFT_2019 0.90 +0.2
149,247 - -0.2
149,247 - -2.2
149,269 + +1.0
149,288 - +1.0
149,336 + -0.9
149,336 + -0.7
149,336 + -0.2
149,336 + -0.2
149,344 - -1.1
149,344 - -0.9
149,344 - -0.0
149,344 - -1.2
149,344 - -0.8
149,344 - +1.3
149,544 - B158DRAFT_2020 0.20 -1.6
149,553 + B158DRAFT_2020 0.22 -1.9
149,553 + B158DRAFT_2020 0.22 -2.4
149,573 - B158DRAFT_2020 0.25 -1.8
149,641 + B158DRAFT_2020 0.38 -1.4
149,652 + B158DRAFT_2020 0.40 -0.4
149,657 + B158DRAFT_2020 0.41 +1.0
149,664 + B158DRAFT_2020 0.42 -1.8
149,710 + B158DRAFT_2020 0.51 -2.2
149,844 + B158DRAFT_2020 0.76 -0.6
149,852 - B158DRAFT_2020 0.77 +0.4
149,892 + B158DRAFT_2020 0.84 +0.2
149,909 + B158DRAFT_2020 0.88 +0.2
149,909 + B158DRAFT_2020 0.88 -1.2
149,914 - B158DRAFT_2020 0.89 -0.0
149,961 + -0.4
149,964 + +1.7
149,969 - -0.9
149,969 - +0.2
149,989 - -1.4
150,007 + -1.5
150,124 + -1.5
150,133 - B158DRAFT_2021 0.10 +0.1
150,142 + B158DRAFT_2021 0.11 -1.1
150,266 - B158DRAFT_2021 0.21 +0.5
150,268 + B158DRAFT_2021 0.21 -0.4
150,276 - B158DRAFT_2021 0.21 +0.5

Or see this region's nucleotide sequence