Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1936

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1934 and B158DRAFT_1935 overlap by 8 nucleotidesB158DRAFT_1935 and B158DRAFT_1936 are separated by 13 nucleotidesB158DRAFT_1936 and B158DRAFT_1937 are separated by 24 nucleotidesB158DRAFT_1937 and B158DRAFT_1938 are separated by 127 nucleotides B158DRAFT_1934: B158DRAFT_1934 - Protein of unknown function (DUF2889)., at 70,513 to 71,088 _1934 B158DRAFT_1935: B158DRAFT_1935 - Uncharacterized protein conserved in bacteria, at 71,081 to 71,419 _1935 B158DRAFT_1936: B158DRAFT_1936 - transcriptional regulator, TraR/DksA family, at 71,433 to 71,804 _1936 B158DRAFT_1937: B158DRAFT_1937 - O-6-methylguanine DNA methyltransferase, at 71,829 to 72,236 _1937 B158DRAFT_1938: B158DRAFT_1938 - Bacterial protein of unknown function (DUF937)., at 72,364 to 72,909 _1938 Position (kb) 71 72Strain fitness (log2 ratio) -2 -1 0 1 2 3at 70.612 kb on + strand, within B158DRAFT_1934at 70.623 kb on + strand, within B158DRAFT_1934at 70.688 kb on + strand, within B158DRAFT_1934at 70.696 kb on - strand, within B158DRAFT_1934at 70.696 kb on - strand, within B158DRAFT_1934at 70.750 kb on - strand, within B158DRAFT_1934at 70.799 kb on - strand, within B158DRAFT_1934at 70.800 kb on + strand, within B158DRAFT_1934at 70.808 kb on - strand, within B158DRAFT_1934at 70.808 kb on - strand, within B158DRAFT_1934at 70.815 kb on - strand, within B158DRAFT_1934at 70.840 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.867 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.871 kb on + strand, within B158DRAFT_1934at 70.871 kb on + strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 71.145 kb on - strand, within B158DRAFT_1935at 71.235 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.359 kb on - strand, within B158DRAFT_1935at 71.459 kb on + strandat 71.459 kb on + strandat 71.459 kb on + strandat 71.510 kb on - strand, within B158DRAFT_1936at 71.512 kb on + strand, within B158DRAFT_1936at 71.583 kb on - strand, within B158DRAFT_1936at 71.600 kb on + strand, within B158DRAFT_1936at 71.610 kb on + strand, within B158DRAFT_1936at 71.618 kb on - strand, within B158DRAFT_1936at 71.755 kb on - strand, within B158DRAFT_1936at 71.799 kb on - strandat 71.841 kb on + strandat 71.884 kb on - strand, within B158DRAFT_1937at 71.902 kb on + strand, within B158DRAFT_1937at 71.910 kb on - strand, within B158DRAFT_1937at 71.910 kb on - strand, within B158DRAFT_1937at 71.951 kb on + strand, within B158DRAFT_1937at 71.998 kb on + strand, within B158DRAFT_1937at 71.998 kb on + strand, within B158DRAFT_1937at 72.001 kb on - strand, within B158DRAFT_1937at 72.008 kb on + strand, within B158DRAFT_1937at 72.008 kb on + strand, within B158DRAFT_1937at 72.016 kb on - strand, within B158DRAFT_1937at 72.020 kb on - strand, within B158DRAFT_1937at 72.023 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.070 kb on - strand, within B158DRAFT_1937at 72.123 kb on + strand, within B158DRAFT_1937at 72.131 kb on + strand, within B158DRAFT_1937at 72.137 kb on + strand, within B158DRAFT_1937at 72.137 kb on + strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.145 kb on - strand, within B158DRAFT_1937at 72.147 kb on + strand, within B158DRAFT_1937at 72.147 kb on + strand, within B158DRAFT_1937at 72.147 kb on + strand, within B158DRAFT_1937at 72.155 kb on - strand, within B158DRAFT_1937at 72.155 kb on - strand, within B158DRAFT_1937at 72.155 kb on - strand, within B158DRAFT_1937at 72.155 kb on - strand, within B158DRAFT_1937at 72.155 kb on - strand, within B158DRAFT_1937at 72.156 kb on - strand, within B158DRAFT_1937at 72.178 kb on - strand, within B158DRAFT_1937at 72.188 kb on - strand, within B158DRAFT_1937at 72.189 kb on + strand, within B158DRAFT_1937at 72.196 kb on + strandat 72.196 kb on + strandat 72.201 kb on + strandat 72.201 kb on + strandat 72.204 kb on - strandat 72.204 kb on - strandat 72.204 kb on - strandat 72.209 kb on - strandat 72.209 kb on - strandat 72.327 kb on + strandat 72.413 kb on - strandat 72.457 kb on - strand, within B158DRAFT_1938at 72.459 kb on + strand, within B158DRAFT_1938at 72.463 kb on + strand, within B158DRAFT_1938at 72.471 kb on - strand, within B158DRAFT_1938at 72.473 kb on + strand, within B158DRAFT_1938at 72.535 kb on + strand, within B158DRAFT_1938at 72.544 kb on + strand, within B158DRAFT_1938at 72.710 kb on + strand, within B158DRAFT_1938at 72.715 kb on + strand, within B158DRAFT_1938at 72.715 kb on + strand, within B158DRAFT_1938at 72.715 kb on + strand, within B158DRAFT_1938at 72.715 kb on + strand, within B158DRAFT_1938at 72.718 kb on - strand, within B158DRAFT_1938at 72.723 kb on - strand, within B158DRAFT_1938at 72.723 kb on - strand, within B158DRAFT_1938

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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70,612 + B158DRAFT_1934 0.17 -0.5
70,623 + B158DRAFT_1934 0.19 +0.6
70,688 + B158DRAFT_1934 0.30 -0.0
70,696 - B158DRAFT_1934 0.32 -1.0
70,696 - B158DRAFT_1934 0.32 +0.3
70,750 - B158DRAFT_1934 0.41 -0.4
70,799 - B158DRAFT_1934 0.50 -0.6
70,800 + B158DRAFT_1934 0.50 +0.3
70,808 - B158DRAFT_1934 0.51 -2.1
70,808 - B158DRAFT_1934 0.51 +0.7
70,815 - B158DRAFT_1934 0.52 -2.2
70,840 + B158DRAFT_1934 0.57 +0.4
70,859 + B158DRAFT_1934 0.60 -0.4
70,859 + B158DRAFT_1934 0.60 -1.0
70,859 + B158DRAFT_1934 0.60 +1.0
70,859 + B158DRAFT_1934 0.60 -1.5
70,861 + B158DRAFT_1934 0.60 -2.0
70,861 + B158DRAFT_1934 0.60 -0.6
70,861 + B158DRAFT_1934 0.60 -0.6
70,861 + B158DRAFT_1934 0.60 +0.9
70,867 - B158DRAFT_1934 0.61 +2.7
70,869 - B158DRAFT_1934 0.62 +0.1
70,869 - B158DRAFT_1934 0.62 +1.5
70,869 - B158DRAFT_1934 0.62 -0.5
70,869 - B158DRAFT_1934 0.62 -0.3
70,869 - B158DRAFT_1934 0.62 +0.8
70,869 - B158DRAFT_1934 0.62 +1.3
70,871 + B158DRAFT_1934 0.62 -1.3
70,871 + B158DRAFT_1934 0.62 +1.0
70,879 - B158DRAFT_1934 0.64 +1.3
70,879 - B158DRAFT_1934 0.64 +1.7
70,879 - B158DRAFT_1934 0.64 -2.0
71,145 - B158DRAFT_1935 0.19 +0.5
71,235 + B158DRAFT_1935 0.45 -0.5
71,351 + B158DRAFT_1935 0.80 -1.3
71,351 + B158DRAFT_1935 0.80 +0.3
71,351 + B158DRAFT_1935 0.80 +2.0
71,359 - B158DRAFT_1935 0.82 +3.0
71,459 + +0.3
71,459 + +2.0
71,459 + -0.1
71,510 - B158DRAFT_1936 0.21 -0.5
71,512 + B158DRAFT_1936 0.21 -1.0
71,583 - B158DRAFT_1936 0.40 -1.0
71,600 + B158DRAFT_1936 0.45 +1.7
71,610 + B158DRAFT_1936 0.48 -1.9
71,618 - B158DRAFT_1936 0.50 +0.9
71,755 - B158DRAFT_1936 0.87 -0.7
71,799 - +0.5
71,841 + -2.0
71,884 - B158DRAFT_1937 0.13 -0.9
71,902 + B158DRAFT_1937 0.18 +0.5
71,910 - B158DRAFT_1937 0.20 +2.0
71,910 - B158DRAFT_1937 0.20 -0.3
71,951 + B158DRAFT_1937 0.30 -0.1
71,998 + B158DRAFT_1937 0.41 +0.3
71,998 + B158DRAFT_1937 0.41 -1.3
72,001 - B158DRAFT_1937 0.42 +1.0
72,008 + B158DRAFT_1937 0.44 -1.3
72,008 + B158DRAFT_1937 0.44 -0.4
72,016 - B158DRAFT_1937 0.46 +0.3
72,020 - B158DRAFT_1937 0.47 -1.0
72,023 + B158DRAFT_1937 0.48 +1.5
72,045 + B158DRAFT_1937 0.53 -0.7
72,045 + B158DRAFT_1937 0.53 -0.8
72,045 + B158DRAFT_1937 0.53 -0.3
72,045 + B158DRAFT_1937 0.53 -0.0
72,045 + B158DRAFT_1937 0.53 +1.6
72,045 + B158DRAFT_1937 0.53 -0.8
72,045 + B158DRAFT_1937 0.53 +1.1
72,053 - B158DRAFT_1937 0.55 -0.4
72,053 - B158DRAFT_1937 0.55 +0.4
72,053 - B158DRAFT_1937 0.55 -0.8
72,070 - B158DRAFT_1937 0.59 -1.6
72,123 + B158DRAFT_1937 0.72 -0.3
72,131 + B158DRAFT_1937 0.74 -1.8
72,137 + B158DRAFT_1937 0.75 +0.9
72,137 + B158DRAFT_1937 0.75 +1.3
72,145 - B158DRAFT_1937 0.77 -0.5
72,145 - B158DRAFT_1937 0.77 -0.6
72,145 - B158DRAFT_1937 0.77 -1.1
72,145 - B158DRAFT_1937 0.77 -0.0
72,145 - B158DRAFT_1937 0.77 +0.4
72,145 - B158DRAFT_1937 0.77 +0.0
72,147 + B158DRAFT_1937 0.78 -1.0
72,147 + B158DRAFT_1937 0.78 -2.2
72,147 + B158DRAFT_1937 0.78 +0.2
72,155 - B158DRAFT_1937 0.80 -1.0
72,155 - B158DRAFT_1937 0.80 -1.1
72,155 - B158DRAFT_1937 0.80 -1.6
72,155 - B158DRAFT_1937 0.80 -0.6
72,155 - B158DRAFT_1937 0.80 -0.6
72,156 - B158DRAFT_1937 0.80 +0.6
72,178 - B158DRAFT_1937 0.86 -0.7
72,188 - B158DRAFT_1937 0.88 +0.4
72,189 + B158DRAFT_1937 0.88 -0.5
72,196 + -0.4
72,196 + +0.8
72,201 + -0.6
72,201 + +0.1
72,204 - +0.9
72,204 - +0.0
72,204 - -1.1
72,209 - +0.9
72,209 - -0.3
72,327 + -0.9
72,413 - +1.5
72,457 - B158DRAFT_1938 0.17 -0.7
72,459 + B158DRAFT_1938 0.17 +0.0
72,463 + B158DRAFT_1938 0.18 -2.0
72,471 - B158DRAFT_1938 0.20 +0.6
72,473 + B158DRAFT_1938 0.20 -0.4
72,535 + B158DRAFT_1938 0.31 +3.4
72,544 + B158DRAFT_1938 0.33 -1.7
72,710 + B158DRAFT_1938 0.63 +0.5
72,715 + B158DRAFT_1938 0.64 -1.3
72,715 + B158DRAFT_1938 0.64 +0.3
72,715 + B158DRAFT_1938 0.64 -0.9
72,715 + B158DRAFT_1938 0.64 -0.3
72,718 - B158DRAFT_1938 0.65 -2.0
72,723 - B158DRAFT_1938 0.66 +1.2
72,723 - B158DRAFT_1938 0.66 -0.3

Or see this region's nucleotide sequence