Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1841 and B158DRAFT_1842 are separated by 10 nucleotides B158DRAFT_1842 and B158DRAFT_1843 overlap by 8 nucleotides B158DRAFT_1843 and B158DRAFT_1844 are separated by 143 nucleotides
B158DRAFT_1841: B158DRAFT_1841 - hypothetical protein, at 1,939,688 to 1,940,557
_1841
B158DRAFT_1842: B158DRAFT_1842 - hypothetical protein, at 1,940,568 to 1,941,086
_1842
B158DRAFT_1843: B158DRAFT_1843 - RNA polymerase sigma factor, sigma-70 family, at 1,941,079 to 1,941,645
_1843
B158DRAFT_1844: B158DRAFT_1844 - hypothetical protein, at 1,941,789 to 1,942,373
_1844
Position (kb)
1941
1942 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1940.082 kb on - strand, within B158DRAFT_1841 at 1940.082 kb on - strand, within B158DRAFT_1841 at 1940.089 kb on - strand, within B158DRAFT_1841 at 1940.122 kb on - strand, within B158DRAFT_1841 at 1940.143 kb on - strand, within B158DRAFT_1841 at 1940.143 kb on - strand, within B158DRAFT_1841 at 1940.163 kb on - strand, within B158DRAFT_1841 at 1940.193 kb on + strand, within B158DRAFT_1841 at 1940.262 kb on - strand, within B158DRAFT_1841 at 1940.326 kb on - strand, within B158DRAFT_1841 at 1940.398 kb on + strand, within B158DRAFT_1841 at 1940.398 kb on + strand, within B158DRAFT_1841 at 1940.398 kb on + strand, within B158DRAFT_1841 at 1940.398 kb on + strand, within B158DRAFT_1841 at 1940.406 kb on - strand, within B158DRAFT_1841 at 1940.517 kb on - strand at 1940.570 kb on + strand at 1940.668 kb on + strand, within B158DRAFT_1842 at 1940.668 kb on + strand, within B158DRAFT_1842 at 1940.676 kb on - strand, within B158DRAFT_1842 at 1940.678 kb on + strand, within B158DRAFT_1842 at 1940.723 kb on - strand, within B158DRAFT_1842 at 1940.858 kb on - strand, within B158DRAFT_1842 at 1940.992 kb on + strand, within B158DRAFT_1842 at 1941.115 kb on + strand at 1941.180 kb on + strand, within B158DRAFT_1843 at 1941.188 kb on - strand, within B158DRAFT_1843 at 1941.310 kb on + strand, within B158DRAFT_1843 at 1941.318 kb on - strand, within B158DRAFT_1843 at 1941.320 kb on + strand, within B158DRAFT_1843 at 1941.354 kb on + strand, within B158DRAFT_1843 at 1941.454 kb on + strand, within B158DRAFT_1843 at 1941.461 kb on - strand, within B158DRAFT_1843 at 1941.463 kb on + strand, within B158DRAFT_1843 at 1941.463 kb on + strand, within B158DRAFT_1843 at 1941.463 kb on + strand, within B158DRAFT_1843 at 1941.471 kb on - strand, within B158DRAFT_1843 at 1941.486 kb on + strand, within B158DRAFT_1843 at 1941.532 kb on + strand, within B158DRAFT_1843 at 1941.594 kb on - strand at 1941.596 kb on + strand at 1941.693 kb on - strand at 1941.693 kb on - strand at 1941.731 kb on - strand at 1941.731 kb on - strand at 1941.774 kb on + strand at 1941.805 kb on + strand at 1941.813 kb on - strand at 1941.813 kb on - strand at 1941.813 kb on - strand at 1941.853 kb on + strand, within B158DRAFT_1844 at 1941.853 kb on + strand, within B158DRAFT_1844 at 1941.966 kb on + strand, within B158DRAFT_1844 at 1941.966 kb on + strand, within B158DRAFT_1844 at 1941.971 kb on + strand, within B158DRAFT_1844 at 1941.974 kb on - strand, within B158DRAFT_1844 at 1942.127 kb on + strand, within B158DRAFT_1844 at 1942.158 kb on - strand, within B158DRAFT_1844 at 1942.193 kb on - strand, within B158DRAFT_1844 at 1942.201 kb on + strand, within B158DRAFT_1844 at 1942.201 kb on + strand, within B158DRAFT_1844 at 1942.209 kb on - strand, within B158DRAFT_1844 at 1942.216 kb on + strand, within B158DRAFT_1844 at 1942.216 kb on + strand, within B158DRAFT_1844 at 1942.219 kb on - strand, within B158DRAFT_1844 at 1942.223 kb on - strand, within B158DRAFT_1844 at 1942.224 kb on - strand, within B158DRAFT_1844 at 1942.284 kb on - strand, within B158DRAFT_1844 at 1942.482 kb on + strand at 1942.571 kb on - strand at 1942.590 kb on - strand at 1942.596 kb on - strand at 1942.596 kb on - strand at 1942.596 kb on - strand at 1942.596 kb on - strand at 1942.624 kb on + strand at 1942.632 kb on + strand at 1942.637 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,940,082 - B158DRAFT_1841 0.45 -0.2 1,940,082 - B158DRAFT_1841 0.45 +0.6 1,940,089 - B158DRAFT_1841 0.46 +0.1 1,940,122 - B158DRAFT_1841 0.50 +0.6 1,940,143 - B158DRAFT_1841 0.52 -0.4 1,940,143 - B158DRAFT_1841 0.52 +1.1 1,940,163 - B158DRAFT_1841 0.55 +1.0 1,940,193 + B158DRAFT_1841 0.58 -0.8 1,940,262 - B158DRAFT_1841 0.66 +0.9 1,940,326 - B158DRAFT_1841 0.73 +1.0 1,940,398 + B158DRAFT_1841 0.82 +0.1 1,940,398 + B158DRAFT_1841 0.82 +1.9 1,940,398 + B158DRAFT_1841 0.82 +0.2 1,940,398 + B158DRAFT_1841 0.82 +0.0 1,940,406 - B158DRAFT_1841 0.83 -1.2 1,940,517 - +1.3 1,940,570 + -1.9 1,940,668 + B158DRAFT_1842 0.19 +2.4 1,940,668 + B158DRAFT_1842 0.19 +1.4 1,940,676 - B158DRAFT_1842 0.21 +0.7 1,940,678 + B158DRAFT_1842 0.21 +1.9 1,940,723 - B158DRAFT_1842 0.30 +2.4 1,940,858 - B158DRAFT_1842 0.56 +0.3 1,940,992 + B158DRAFT_1842 0.82 +1.7 1,941,115 + -0.5 1,941,180 + B158DRAFT_1843 0.18 -2.2 1,941,188 - B158DRAFT_1843 0.19 -2.0 1,941,310 + B158DRAFT_1843 0.41 -0.3 1,941,318 - B158DRAFT_1843 0.42 -0.9 1,941,320 + B158DRAFT_1843 0.43 -2.2 1,941,354 + B158DRAFT_1843 0.49 -0.1 1,941,454 + B158DRAFT_1843 0.66 -0.8 1,941,461 - B158DRAFT_1843 0.67 +0.6 1,941,463 + B158DRAFT_1843 0.68 -0.4 1,941,463 + B158DRAFT_1843 0.68 -0.3 1,941,463 + B158DRAFT_1843 0.68 -0.6 1,941,471 - B158DRAFT_1843 0.69 -1.2 1,941,486 + B158DRAFT_1843 0.72 -1.9 1,941,532 + B158DRAFT_1843 0.80 -0.9 1,941,594 - -1.9 1,941,596 + -0.0 1,941,693 - +0.8 1,941,693 - -1.9 1,941,731 - -0.1 1,941,731 - -0.6 1,941,774 + -0.3 1,941,805 + +0.6 1,941,813 - +0.0 1,941,813 - -1.6 1,941,813 - -0.0 1,941,853 + B158DRAFT_1844 0.11 -2.6 1,941,853 + B158DRAFT_1844 0.11 -0.0 1,941,966 + B158DRAFT_1844 0.30 -0.8 1,941,966 + B158DRAFT_1844 0.30 -0.9 1,941,971 + B158DRAFT_1844 0.31 -0.9 1,941,974 - B158DRAFT_1844 0.32 -2.9 1,942,127 + B158DRAFT_1844 0.58 -1.0 1,942,158 - B158DRAFT_1844 0.63 +0.2 1,942,193 - B158DRAFT_1844 0.69 -1.2 1,942,201 + B158DRAFT_1844 0.70 +1.3 1,942,201 + B158DRAFT_1844 0.70 -0.3 1,942,209 - B158DRAFT_1844 0.72 +1.2 1,942,216 + B158DRAFT_1844 0.73 -1.1 1,942,216 + B158DRAFT_1844 0.73 -1.8 1,942,219 - B158DRAFT_1844 0.74 -0.9 1,942,223 - B158DRAFT_1844 0.74 -1.4 1,942,224 - B158DRAFT_1844 0.74 -0.4 1,942,284 - B158DRAFT_1844 0.85 -2.7 1,942,482 + -0.3 1,942,571 - +0.7 1,942,590 - -1.0 1,942,596 - -0.1 1,942,596 - +1.1 1,942,596 - -0.6 1,942,596 - -0.1 1,942,624 + -0.8 1,942,632 + +0.6 1,942,637 + +0.6
Or see this region's nucleotide sequence