Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1789 and B158DRAFT_1790 are separated by 56 nucleotides B158DRAFT_1790 and B158DRAFT_1791 are separated by 129 nucleotides B158DRAFT_1791 and B158DRAFT_1792 are separated by 294 nucleotides
B158DRAFT_1789: B158DRAFT_1789 - hypothetical protein, at 1,883,823 to 1,884,341
_1789
B158DRAFT_1790: B158DRAFT_1790 - hypothetical protein, at 1,884,398 to 1,884,928
_1790
B158DRAFT_1791: B158DRAFT_1791 - hypothetical protein, at 1,885,058 to 1,885,573
_1791
B158DRAFT_1792: B158DRAFT_1792 - L-asparaginases, type I, at 1,885,868 to 1,886,887
_1792
Position (kb)
1885
1886 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1884.090 kb on - strand, within B158DRAFT_1789 at 1884.221 kb on + strand, within B158DRAFT_1789 at 1884.223 kb on + strand, within B158DRAFT_1789 at 1884.413 kb on + strand at 1884.413 kb on + strand at 1884.421 kb on - strand at 1884.584 kb on - strand, within B158DRAFT_1790 at 1884.584 kb on - strand, within B158DRAFT_1790 at 1884.710 kb on - strand, within B158DRAFT_1790 at 1885.044 kb on + strand at 1885.178 kb on + strand, within B158DRAFT_1791 at 1885.306 kb on + strand, within B158DRAFT_1791 at 1885.306 kb on + strand, within B158DRAFT_1791 at 1885.314 kb on - strand, within B158DRAFT_1791 at 1885.314 kb on - strand, within B158DRAFT_1791 at 1885.314 kb on - strand, within B158DRAFT_1791 at 1885.314 kb on - strand, within B158DRAFT_1791 at 1885.414 kb on + strand, within B158DRAFT_1791 at 1885.447 kb on - strand, within B158DRAFT_1791 at 1885.454 kb on - strand, within B158DRAFT_1791 at 1885.695 kb on + strand at 1885.849 kb on + strand at 1885.913 kb on - strand at 1885.929 kb on - strand at 1886.058 kb on + strand, within B158DRAFT_1792 at 1886.067 kb on - strand, within B158DRAFT_1792 at 1886.118 kb on + strand, within B158DRAFT_1792 at 1886.118 kb on + strand, within B158DRAFT_1792 at 1886.126 kb on - strand, within B158DRAFT_1792 at 1886.157 kb on - strand, within B158DRAFT_1792 at 1886.263 kb on + strand, within B158DRAFT_1792 at 1886.271 kb on - strand, within B158DRAFT_1792 at 1886.271 kb on - strand, within B158DRAFT_1792 at 1886.271 kb on - strand, within B158DRAFT_1792 at 1886.287 kb on + strand, within B158DRAFT_1792 at 1886.363 kb on + strand, within B158DRAFT_1792 at 1886.410 kb on - strand, within B158DRAFT_1792 at 1886.416 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.424 kb on + strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.432 kb on - strand, within B158DRAFT_1792 at 1886.458 kb on + strand, within B158DRAFT_1792
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,884,090 - B158DRAFT_1789 0.51 +0.4 1,884,221 + B158DRAFT_1789 0.77 +0.1 1,884,223 + B158DRAFT_1789 0.77 -1.1 1,884,413 + -0.7 1,884,413 + -0.4 1,884,421 - -1.2 1,884,584 - B158DRAFT_1790 0.35 +0.6 1,884,584 - B158DRAFT_1790 0.35 +0.3 1,884,710 - B158DRAFT_1790 0.59 -0.4 1,885,044 + -0.0 1,885,178 + B158DRAFT_1791 0.23 -0.0 1,885,306 + B158DRAFT_1791 0.48 -2.1 1,885,306 + B158DRAFT_1791 0.48 +1.4 1,885,314 - B158DRAFT_1791 0.50 +1.1 1,885,314 - B158DRAFT_1791 0.50 +1.6 1,885,314 - B158DRAFT_1791 0.50 -0.9 1,885,314 - B158DRAFT_1791 0.50 +1.0 1,885,414 + B158DRAFT_1791 0.69 +0.2 1,885,447 - B158DRAFT_1791 0.75 -0.4 1,885,454 - B158DRAFT_1791 0.77 +1.1 1,885,695 + -0.2 1,885,849 + -1.7 1,885,913 - -0.4 1,885,929 - +0.3 1,886,058 + B158DRAFT_1792 0.19 -1.2 1,886,067 - B158DRAFT_1792 0.20 -1.4 1,886,118 + B158DRAFT_1792 0.25 -1.1 1,886,118 + B158DRAFT_1792 0.25 -0.5 1,886,126 - B158DRAFT_1792 0.25 +4.1 1,886,157 - B158DRAFT_1792 0.28 -0.3 1,886,263 + B158DRAFT_1792 0.39 +0.0 1,886,271 - B158DRAFT_1792 0.40 +0.2 1,886,271 - B158DRAFT_1792 0.40 +0.1 1,886,271 - B158DRAFT_1792 0.40 +1.6 1,886,287 + B158DRAFT_1792 0.41 +1.7 1,886,363 + B158DRAFT_1792 0.49 -0.1 1,886,410 - B158DRAFT_1792 0.53 -2.1 1,886,416 + B158DRAFT_1792 0.54 +0.8 1,886,424 + B158DRAFT_1792 0.55 -1.8 1,886,424 + B158DRAFT_1792 0.55 +0.1 1,886,424 + B158DRAFT_1792 0.55 -0.6 1,886,424 + B158DRAFT_1792 0.55 -0.5 1,886,424 + B158DRAFT_1792 0.55 -0.6 1,886,424 + B158DRAFT_1792 0.55 -0.1 1,886,424 + B158DRAFT_1792 0.55 +0.1 1,886,424 + B158DRAFT_1792 0.55 -0.2 1,886,432 - B158DRAFT_1792 0.55 +1.6 1,886,432 - B158DRAFT_1792 0.55 -0.5 1,886,432 - B158DRAFT_1792 0.55 -0.6 1,886,432 - B158DRAFT_1792 0.55 -0.6 1,886,432 - B158DRAFT_1792 0.55 +0.0 1,886,432 - B158DRAFT_1792 0.55 -0.0 1,886,458 + B158DRAFT_1792 0.58 -1.1
Or see this region's nucleotide sequence