Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1747 and B158DRAFT_1748 overlap by 4 nucleotides B158DRAFT_1748 and B158DRAFT_1749 are separated by 6 nucleotides B158DRAFT_1749 and B158DRAFT_1750 are separated by 34 nucleotides
B158DRAFT_1747: B158DRAFT_1747 - DNA polymerase III, delta' subunit, at 1,830,491 to 1,831,489
_1747
B158DRAFT_1748: B158DRAFT_1748 - thymidylate kinase, at 1,831,486 to 1,832,145
_1748
B158DRAFT_1749: B158DRAFT_1749 - conserved hypothetical protein, YceG family, at 1,832,152 to 1,833,156
_1749
B158DRAFT_1750: B158DRAFT_1750 - aminodeoxychorismate lyase, at 1,833,191 to 1,834,045
_1750
Position (kb)
1832
1833
1834 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1831.504 kb on - strand at 1832.178 kb on - strand at 1832.178 kb on - strand at 1832.178 kb on - strand at 1832.283 kb on - strand, within B158DRAFT_1749 at 1832.337 kb on - strand, within B158DRAFT_1749 at 1832.339 kb on - strand, within B158DRAFT_1749 at 1832.350 kb on - strand, within B158DRAFT_1749 at 1832.443 kb on - strand, within B158DRAFT_1749 at 1832.455 kb on - strand, within B158DRAFT_1749 at 1832.501 kb on - strand, within B158DRAFT_1749 at 1833.196 kb on - strand at 1833.228 kb on - strand at 1833.326 kb on + strand, within B158DRAFT_1750 at 1833.344 kb on - strand, within B158DRAFT_1750 at 1833.357 kb on + strand, within B158DRAFT_1750 at 1833.367 kb on + strand, within B158DRAFT_1750 at 1833.367 kb on + strand, within B158DRAFT_1750 at 1833.367 kb on + strand, within B158DRAFT_1750 at 1833.375 kb on - strand, within B158DRAFT_1750 at 1833.406 kb on - strand, within B158DRAFT_1750 at 1833.419 kb on - strand, within B158DRAFT_1750 at 1833.427 kb on + strand, within B158DRAFT_1750 at 1833.552 kb on + strand, within B158DRAFT_1750 at 1833.560 kb on - strand, within B158DRAFT_1750 at 1833.560 kb on - strand, within B158DRAFT_1750 at 1833.609 kb on - strand, within B158DRAFT_1750 at 1833.624 kb on - strand, within B158DRAFT_1750 at 1833.643 kb on - strand, within B158DRAFT_1750 at 1833.646 kb on + strand, within B158DRAFT_1750 at 1833.647 kb on + strand, within B158DRAFT_1750 at 1833.647 kb on + strand, within B158DRAFT_1750 at 1833.671 kb on - strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.680 kb on + strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.688 kb on - strand, within B158DRAFT_1750 at 1833.731 kb on - strand, within B158DRAFT_1750 at 1833.738 kb on - strand, within B158DRAFT_1750 at 1833.738 kb on - strand, within B158DRAFT_1750 at 1833.740 kb on - strand, within B158DRAFT_1750 at 1833.762 kb on + strand, within B158DRAFT_1750 at 1833.772 kb on - strand, within B158DRAFT_1750 at 1833.793 kb on - strand, within B158DRAFT_1750 at 1833.793 kb on - strand, within B158DRAFT_1750 at 1833.887 kb on + strand, within B158DRAFT_1750 at 1833.887 kb on + strand, within B158DRAFT_1750 at 1833.889 kb on + strand, within B158DRAFT_1750 at 1833.946 kb on - strand, within B158DRAFT_1750 at 1833.949 kb on - strand, within B158DRAFT_1750 at 1833.960 kb on - strand at 1834.004 kb on - strand at 1834.124 kb on - strand at 1834.149 kb on + strand at 1834.149 kb on + strand at 1834.149 kb on + strand at 1834.149 kb on + strand at 1834.149 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,831,504 - -1.7 1,832,178 - +0.1 1,832,178 - +1.6 1,832,178 - +1.9 1,832,283 - B158DRAFT_1749 0.13 +0.8 1,832,337 - B158DRAFT_1749 0.18 +3.1 1,832,339 - B158DRAFT_1749 0.19 +1.9 1,832,350 - B158DRAFT_1749 0.20 +0.6 1,832,443 - B158DRAFT_1749 0.29 +1.4 1,832,455 - B158DRAFT_1749 0.30 +1.6 1,832,501 - B158DRAFT_1749 0.35 +1.6 1,833,196 - +0.4 1,833,228 - -1.0 1,833,326 + B158DRAFT_1750 0.16 +0.4 1,833,344 - B158DRAFT_1750 0.18 -0.0 1,833,357 + B158DRAFT_1750 0.19 +0.9 1,833,367 + B158DRAFT_1750 0.21 -0.2 1,833,367 + B158DRAFT_1750 0.21 +0.4 1,833,367 + B158DRAFT_1750 0.21 -0.5 1,833,375 - B158DRAFT_1750 0.22 -0.6 1,833,406 - B158DRAFT_1750 0.25 -0.2 1,833,419 - B158DRAFT_1750 0.27 +0.7 1,833,427 + B158DRAFT_1750 0.28 +0.6 1,833,552 + B158DRAFT_1750 0.42 -1.3 1,833,560 - B158DRAFT_1750 0.43 -1.5 1,833,560 - B158DRAFT_1750 0.43 -0.4 1,833,609 - B158DRAFT_1750 0.49 -0.8 1,833,624 - B158DRAFT_1750 0.51 +0.0 1,833,643 - B158DRAFT_1750 0.53 -2.5 1,833,646 + B158DRAFT_1750 0.53 -0.4 1,833,647 + B158DRAFT_1750 0.53 -0.2 1,833,647 + B158DRAFT_1750 0.53 +0.0 1,833,671 - B158DRAFT_1750 0.56 -0.8 1,833,680 + B158DRAFT_1750 0.57 -1.1 1,833,680 + B158DRAFT_1750 0.57 -1.4 1,833,680 + B158DRAFT_1750 0.57 -0.3 1,833,680 + B158DRAFT_1750 0.57 -1.2 1,833,680 + B158DRAFT_1750 0.57 +0.1 1,833,680 + B158DRAFT_1750 0.57 -0.2 1,833,680 + B158DRAFT_1750 0.57 -0.3 1,833,688 - B158DRAFT_1750 0.58 -1.2 1,833,688 - B158DRAFT_1750 0.58 -1.2 1,833,688 - B158DRAFT_1750 0.58 +1.4 1,833,688 - B158DRAFT_1750 0.58 -1.0 1,833,688 - B158DRAFT_1750 0.58 -2.7 1,833,688 - B158DRAFT_1750 0.58 -1.8 1,833,688 - B158DRAFT_1750 0.58 -0.9 1,833,731 - B158DRAFT_1750 0.63 -2.1 1,833,738 - B158DRAFT_1750 0.64 +0.9 1,833,738 - B158DRAFT_1750 0.64 +0.4 1,833,740 - B158DRAFT_1750 0.64 -0.2 1,833,762 + B158DRAFT_1750 0.67 +0.1 1,833,772 - B158DRAFT_1750 0.68 -0.2 1,833,793 - B158DRAFT_1750 0.70 -0.0 1,833,793 - B158DRAFT_1750 0.70 -0.4 1,833,887 + B158DRAFT_1750 0.81 +1.2 1,833,887 + B158DRAFT_1750 0.81 -0.8 1,833,889 + B158DRAFT_1750 0.82 -0.6 1,833,946 - B158DRAFT_1750 0.88 -0.5 1,833,949 - B158DRAFT_1750 0.89 +0.6 1,833,960 - -0.8 1,834,004 - +0.1 1,834,124 - -1.1 1,834,149 + -0.4 1,834,149 + -0.8 1,834,149 + -1.0 1,834,149 + +0.5 1,834,149 + -0.3
Or see this region's nucleotide sequence