Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1749

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1747 and B158DRAFT_1748 overlap by 4 nucleotidesB158DRAFT_1748 and B158DRAFT_1749 are separated by 6 nucleotidesB158DRAFT_1749 and B158DRAFT_1750 are separated by 34 nucleotides B158DRAFT_1747: B158DRAFT_1747 - DNA polymerase III, delta' subunit, at 1,830,491 to 1,831,489 _1747 B158DRAFT_1748: B158DRAFT_1748 - thymidylate kinase, at 1,831,486 to 1,832,145 _1748 B158DRAFT_1749: B158DRAFT_1749 - conserved hypothetical protein, YceG family, at 1,832,152 to 1,833,156 _1749 B158DRAFT_1750: B158DRAFT_1750 - aminodeoxychorismate lyase, at 1,833,191 to 1,834,045 _1750 Position (kb) 1832 1833 1834Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1831.504 kb on - strandat 1832.178 kb on - strandat 1832.178 kb on - strandat 1832.178 kb on - strandat 1832.283 kb on - strand, within B158DRAFT_1749at 1832.337 kb on - strand, within B158DRAFT_1749at 1832.339 kb on - strand, within B158DRAFT_1749at 1832.350 kb on - strand, within B158DRAFT_1749at 1832.443 kb on - strand, within B158DRAFT_1749at 1832.455 kb on - strand, within B158DRAFT_1749at 1832.501 kb on - strand, within B158DRAFT_1749at 1833.196 kb on - strandat 1833.228 kb on - strandat 1833.326 kb on + strand, within B158DRAFT_1750at 1833.344 kb on - strand, within B158DRAFT_1750at 1833.357 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.375 kb on - strand, within B158DRAFT_1750at 1833.406 kb on - strand, within B158DRAFT_1750at 1833.419 kb on - strand, within B158DRAFT_1750at 1833.427 kb on + strand, within B158DRAFT_1750at 1833.552 kb on + strand, within B158DRAFT_1750at 1833.560 kb on - strand, within B158DRAFT_1750at 1833.560 kb on - strand, within B158DRAFT_1750at 1833.609 kb on - strand, within B158DRAFT_1750at 1833.624 kb on - strand, within B158DRAFT_1750at 1833.643 kb on - strand, within B158DRAFT_1750at 1833.646 kb on + strand, within B158DRAFT_1750at 1833.647 kb on + strand, within B158DRAFT_1750at 1833.647 kb on + strand, within B158DRAFT_1750at 1833.671 kb on - strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.731 kb on - strand, within B158DRAFT_1750at 1833.738 kb on - strand, within B158DRAFT_1750at 1833.738 kb on - strand, within B158DRAFT_1750at 1833.740 kb on - strand, within B158DRAFT_1750at 1833.762 kb on + strand, within B158DRAFT_1750at 1833.772 kb on - strand, within B158DRAFT_1750at 1833.793 kb on - strand, within B158DRAFT_1750at 1833.793 kb on - strand, within B158DRAFT_1750at 1833.887 kb on + strand, within B158DRAFT_1750at 1833.887 kb on + strand, within B158DRAFT_1750at 1833.889 kb on + strand, within B158DRAFT_1750at 1833.946 kb on - strand, within B158DRAFT_1750at 1833.949 kb on - strand, within B158DRAFT_1750at 1833.960 kb on - strandat 1834.004 kb on - strandat 1834.124 kb on - strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,831,504 - -1.7
1,832,178 - +0.1
1,832,178 - +1.6
1,832,178 - +1.9
1,832,283 - B158DRAFT_1749 0.13 +0.8
1,832,337 - B158DRAFT_1749 0.18 +3.1
1,832,339 - B158DRAFT_1749 0.19 +1.9
1,832,350 - B158DRAFT_1749 0.20 +0.6
1,832,443 - B158DRAFT_1749 0.29 +1.4
1,832,455 - B158DRAFT_1749 0.30 +1.6
1,832,501 - B158DRAFT_1749 0.35 +1.6
1,833,196 - +0.4
1,833,228 - -1.0
1,833,326 + B158DRAFT_1750 0.16 +0.4
1,833,344 - B158DRAFT_1750 0.18 -0.0
1,833,357 + B158DRAFT_1750 0.19 +0.9
1,833,367 + B158DRAFT_1750 0.21 -0.2
1,833,367 + B158DRAFT_1750 0.21 +0.4
1,833,367 + B158DRAFT_1750 0.21 -0.5
1,833,375 - B158DRAFT_1750 0.22 -0.6
1,833,406 - B158DRAFT_1750 0.25 -0.2
1,833,419 - B158DRAFT_1750 0.27 +0.7
1,833,427 + B158DRAFT_1750 0.28 +0.6
1,833,552 + B158DRAFT_1750 0.42 -1.3
1,833,560 - B158DRAFT_1750 0.43 -1.5
1,833,560 - B158DRAFT_1750 0.43 -0.4
1,833,609 - B158DRAFT_1750 0.49 -0.8
1,833,624 - B158DRAFT_1750 0.51 +0.0
1,833,643 - B158DRAFT_1750 0.53 -2.5
1,833,646 + B158DRAFT_1750 0.53 -0.4
1,833,647 + B158DRAFT_1750 0.53 -0.2
1,833,647 + B158DRAFT_1750 0.53 +0.0
1,833,671 - B158DRAFT_1750 0.56 -0.8
1,833,680 + B158DRAFT_1750 0.57 -1.1
1,833,680 + B158DRAFT_1750 0.57 -1.4
1,833,680 + B158DRAFT_1750 0.57 -0.3
1,833,680 + B158DRAFT_1750 0.57 -1.2
1,833,680 + B158DRAFT_1750 0.57 +0.1
1,833,680 + B158DRAFT_1750 0.57 -0.2
1,833,680 + B158DRAFT_1750 0.57 -0.3
1,833,688 - B158DRAFT_1750 0.58 -1.2
1,833,688 - B158DRAFT_1750 0.58 -1.2
1,833,688 - B158DRAFT_1750 0.58 +1.4
1,833,688 - B158DRAFT_1750 0.58 -1.0
1,833,688 - B158DRAFT_1750 0.58 -2.7
1,833,688 - B158DRAFT_1750 0.58 -1.8
1,833,688 - B158DRAFT_1750 0.58 -0.9
1,833,731 - B158DRAFT_1750 0.63 -2.1
1,833,738 - B158DRAFT_1750 0.64 +0.9
1,833,738 - B158DRAFT_1750 0.64 +0.4
1,833,740 - B158DRAFT_1750 0.64 -0.2
1,833,762 + B158DRAFT_1750 0.67 +0.1
1,833,772 - B158DRAFT_1750 0.68 -0.2
1,833,793 - B158DRAFT_1750 0.70 -0.0
1,833,793 - B158DRAFT_1750 0.70 -0.4
1,833,887 + B158DRAFT_1750 0.81 +1.2
1,833,887 + B158DRAFT_1750 0.81 -0.8
1,833,889 + B158DRAFT_1750 0.82 -0.6
1,833,946 - B158DRAFT_1750 0.88 -0.5
1,833,949 - B158DRAFT_1750 0.89 +0.6
1,833,960 - -0.8
1,834,004 - +0.1
1,834,124 - -1.1
1,834,149 + -0.4
1,834,149 + -0.8
1,834,149 + -1.0
1,834,149 + +0.5
1,834,149 + -0.3

Or see this region's nucleotide sequence