Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1539 and B158DRAFT_1540 are separated by 184 nucleotides B158DRAFT_1540 and B158DRAFT_1541 are separated by 195 nucleotides B158DRAFT_1541 and B158DRAFT_1542 are separated by 1 nucleotides
B158DRAFT_1539: B158DRAFT_1539 - hypothetical protein, at 1,592,976 to 1,595,576
_1539
B158DRAFT_1540: B158DRAFT_1540 - hypothetical protein, at 1,595,761 to 1,596,012
_1540
B158DRAFT_1541: B158DRAFT_1541 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,596,208 to 1,596,966
_1541
B158DRAFT_1542: B158DRAFT_1542 - ABC-type transport system, involved in lipoprotein release, permease component, at 1,596,968 to 1,599,334
_1542
Position (kb)
1596
1597 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1595.224 kb on - strand, within B158DRAFT_1539 at 1595.438 kb on + strand at 1595.805 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.957 kb on - strand, within B158DRAFT_1540 at 1595.969 kb on - strand, within B158DRAFT_1540 at 1596.096 kb on + strand at 1596.117 kb on + strand at 1596.171 kb on + strand at 1596.179 kb on - strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.274 kb on - strand at 1596.281 kb on + strand at 1596.289 kb on - strand, within B158DRAFT_1541 at 1596.291 kb on + strand, within B158DRAFT_1541 at 1596.298 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.328 kb on + strand, within B158DRAFT_1541 at 1596.344 kb on + strand, within B158DRAFT_1541 at 1596.387 kb on + strand, within B158DRAFT_1541 at 1596.395 kb on - strand, within B158DRAFT_1541 at 1596.427 kb on + strand, within B158DRAFT_1541 at 1596.428 kb on + strand, within B158DRAFT_1541 at 1596.435 kb on - strand, within B158DRAFT_1541 at 1596.453 kb on + strand, within B158DRAFT_1541 at 1596.496 kb on - strand, within B158DRAFT_1541 at 1596.550 kb on - strand, within B158DRAFT_1541 at 1596.578 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.628 kb on + strand, within B158DRAFT_1541 at 1596.636 kb on - strand, within B158DRAFT_1541 at 1596.636 kb on - strand, within B158DRAFT_1541 at 1596.636 kb on - strand, within B158DRAFT_1541 at 1596.636 kb on - strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.681 kb on + strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.689 kb on - strand, within B158DRAFT_1541 at 1596.732 kb on + strand, within B158DRAFT_1541 at 1596.756 kb on + strand, within B158DRAFT_1541 at 1596.757 kb on - strand, within B158DRAFT_1541 at 1596.764 kb on - strand, within B158DRAFT_1541 at 1596.803 kb on + strand, within B158DRAFT_1541 at 1596.803 kb on + strand, within B158DRAFT_1541 at 1596.803 kb on + strand, within B158DRAFT_1541 at 1596.811 kb on - strand, within B158DRAFT_1541 at 1596.811 kb on - strand, within B158DRAFT_1541 at 1596.811 kb on - strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.813 kb on + strand, within B158DRAFT_1541 at 1596.818 kb on + strand, within B158DRAFT_1541 at 1596.821 kb on - strand, within B158DRAFT_1541 at 1596.826 kb on - strand, within B158DRAFT_1541 at 1596.851 kb on + strand, within B158DRAFT_1541 at 1596.901 kb on - strand at 1596.927 kb on - strand at 1596.981 kb on + strand at 1596.981 kb on + strand at 1596.981 kb on + strand at 1596.989 kb on - strand at 1596.989 kb on - strand at 1596.989 kb on - strand at 1597.000 kb on + strand at 1597.010 kb on + strand at 1597.010 kb on + strand at 1597.016 kb on + strand at 1597.016 kb on + strand at 1597.018 kb on - strand at 1597.019 kb on - strand at 1597.046 kb on + strand at 1597.068 kb on + strand at 1597.069 kb on - strand at 1597.069 kb on - strand at 1597.073 kb on + strand at 1597.073 kb on + strand at 1597.092 kb on - strand at 1597.150 kb on - strand at 1597.152 kb on + strand at 1597.174 kb on - strand at 1597.193 kb on - strand at 1597.194 kb on + strand at 1597.202 kb on - strand at 1597.204 kb on - strand at 1597.271 kb on + strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.279 kb on - strand, within B158DRAFT_1542 at 1597.314 kb on + strand, within B158DRAFT_1542 at 1597.336 kb on - strand, within B158DRAFT_1542 at 1597.336 kb on - strand, within B158DRAFT_1542 at 1597.347 kb on + strand, within B158DRAFT_1542 at 1597.350 kb on - strand, within B158DRAFT_1542 at 1597.362 kb on + strand, within B158DRAFT_1542 at 1597.436 kb on + strand, within B158DRAFT_1542 at 1597.467 kb on - strand, within B158DRAFT_1542 at 1597.485 kb on + strand, within B158DRAFT_1542 at 1597.488 kb on - strand, within B158DRAFT_1542 at 1597.490 kb on + strand, within B158DRAFT_1542 at 1597.490 kb on + strand, within B158DRAFT_1542 at 1597.493 kb on - strand, within B158DRAFT_1542 at 1597.498 kb on - strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.559 kb on + strand, within B158DRAFT_1542 at 1597.567 kb on - strand, within B158DRAFT_1542 at 1597.567 kb on - strand, within B158DRAFT_1542 at 1597.574 kb on - strand, within B158DRAFT_1542 at 1597.815 kb on + strand, within B158DRAFT_1542 at 1597.820 kb on + strand, within B158DRAFT_1542 at 1597.835 kb on - strand, within B158DRAFT_1542 at 1597.836 kb on + strand, within B158DRAFT_1542 at 1597.844 kb on - strand, within B158DRAFT_1542 at 1597.844 kb on - strand, within B158DRAFT_1542 at 1597.871 kb on + strand, within B158DRAFT_1542 at 1597.872 kb on + strand, within B158DRAFT_1542 at 1597.879 kb on - strand, within B158DRAFT_1542 at 1597.888 kb on + strand, within B158DRAFT_1542 at 1597.926 kb on - strand, within B158DRAFT_1542 at 1597.932 kb on + strand, within B158DRAFT_1542
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,595,224 - B158DRAFT_1539 0.86 -1.4 1,595,438 + -2.4 1,595,805 + B158DRAFT_1540 0.17 -2.3 1,595,879 + B158DRAFT_1540 0.47 -0.9 1,595,879 + B158DRAFT_1540 0.47 -0.9 1,595,949 + B158DRAFT_1540 0.75 -2.1 1,595,949 + B158DRAFT_1540 0.75 +0.5 1,595,949 + B158DRAFT_1540 0.75 +2.4 1,595,957 - B158DRAFT_1540 0.78 -1.4 1,595,969 - B158DRAFT_1540 0.83 +1.4 1,596,096 + -2.6 1,596,117 + -0.0 1,596,171 + -1.1 1,596,179 - -0.5 1,596,261 + -0.5 1,596,261 + -0.5 1,596,261 + +0.8 1,596,261 + -0.6 1,596,261 + +0.3 1,596,261 + +2.6 1,596,261 + +2.2 1,596,261 + -0.6 1,596,261 + -0.4 1,596,261 + +0.6 1,596,261 + +2.8 1,596,261 + +0.1 1,596,261 + +1.5 1,596,261 + -0.7 1,596,261 + -0.1 1,596,261 + -2.3 1,596,261 + +0.1 1,596,261 + -0.8 1,596,261 + +0.5 1,596,261 + +0.3 1,596,261 + +0.3 1,596,261 + -1.3 1,596,261 + -1.9 1,596,261 + +0.5 1,596,261 + +0.6 1,596,261 + -0.4 1,596,261 + +0.2 1,596,261 + -0.6 1,596,261 + +0.8 1,596,261 + -0.4 1,596,261 + +0.2 1,596,261 + -0.8 1,596,269 - +0.4 1,596,269 - -0.2 1,596,269 - +1.4 1,596,269 - +0.3 1,596,269 - -1.0 1,596,269 - -1.5 1,596,269 - -1.1 1,596,269 - -1.2 1,596,269 - +0.9 1,596,269 - +0.0 1,596,269 - -0.4 1,596,269 - -1.1 1,596,269 - -1.0 1,596,269 - -0.4 1,596,269 - -0.9 1,596,269 - +0.3 1,596,269 - -1.8 1,596,269 - -0.8 1,596,269 - +0.1 1,596,269 - -1.2 1,596,269 - -0.6 1,596,269 - +1.3 1,596,269 - +0.6 1,596,274 - -0.7 1,596,281 + -0.4 1,596,289 - B158DRAFT_1541 0.11 -0.4 1,596,291 + B158DRAFT_1541 0.11 -0.9 1,596,298 + B158DRAFT_1541 0.12 -0.9 1,596,315 + B158DRAFT_1541 0.14 +0.1 1,596,315 + B158DRAFT_1541 0.14 -1.4 1,596,315 + B158DRAFT_1541 0.14 +0.2 1,596,328 + B158DRAFT_1541 0.16 -1.4 1,596,344 + B158DRAFT_1541 0.18 -0.6 1,596,387 + B158DRAFT_1541 0.24 +1.1 1,596,395 - B158DRAFT_1541 0.25 -0.5 1,596,427 + B158DRAFT_1541 0.29 -1.6 1,596,428 + B158DRAFT_1541 0.29 -0.5 1,596,435 - B158DRAFT_1541 0.30 -1.7 1,596,453 + B158DRAFT_1541 0.32 +0.2 1,596,496 - B158DRAFT_1541 0.38 -0.0 1,596,550 - B158DRAFT_1541 0.45 -0.4 1,596,578 + B158DRAFT_1541 0.49 -0.3 1,596,628 + B158DRAFT_1541 0.55 -0.9 1,596,628 + B158DRAFT_1541 0.55 +1.3 1,596,628 + B158DRAFT_1541 0.55 -0.4 1,596,628 + B158DRAFT_1541 0.55 +1.9 1,596,628 + B158DRAFT_1541 0.55 +0.8 1,596,628 + B158DRAFT_1541 0.55 -1.3 1,596,628 + B158DRAFT_1541 0.55 -0.6 1,596,628 + B158DRAFT_1541 0.55 -0.7 1,596,636 - B158DRAFT_1541 0.56 -0.9 1,596,636 - B158DRAFT_1541 0.56 -2.0 1,596,636 - B158DRAFT_1541 0.56 -0.2 1,596,636 - B158DRAFT_1541 0.56 -1.2 1,596,681 + B158DRAFT_1541 0.62 +1.5 1,596,681 + B158DRAFT_1541 0.62 +0.2 1,596,681 + B158DRAFT_1541 0.62 -0.4 1,596,681 + B158DRAFT_1541 0.62 -1.6 1,596,681 + B158DRAFT_1541 0.62 -0.2 1,596,681 + B158DRAFT_1541 0.62 -0.9 1,596,681 + B158DRAFT_1541 0.62 -0.1 1,596,689 - B158DRAFT_1541 0.63 +0.3 1,596,689 - B158DRAFT_1541 0.63 -1.2 1,596,689 - B158DRAFT_1541 0.63 -0.0 1,596,689 - B158DRAFT_1541 0.63 +1.4 1,596,689 - B158DRAFT_1541 0.63 -0.5 1,596,689 - B158DRAFT_1541 0.63 -1.0 1,596,689 - B158DRAFT_1541 0.63 -2.1 1,596,689 - B158DRAFT_1541 0.63 -1.4 1,596,732 + B158DRAFT_1541 0.69 -0.9 1,596,756 + B158DRAFT_1541 0.72 +1.4 1,596,757 - B158DRAFT_1541 0.72 +0.8 1,596,764 - B158DRAFT_1541 0.73 -1.1 1,596,803 + B158DRAFT_1541 0.78 -2.4 1,596,803 + B158DRAFT_1541 0.78 -0.2 1,596,803 + B158DRAFT_1541 0.78 -1.3 1,596,811 - B158DRAFT_1541 0.79 +2.2 1,596,811 - B158DRAFT_1541 0.79 -1.4 1,596,811 - B158DRAFT_1541 0.79 -1.4 1,596,813 + B158DRAFT_1541 0.80 -1.1 1,596,813 + B158DRAFT_1541 0.80 -1.8 1,596,813 + B158DRAFT_1541 0.80 -0.3 1,596,813 + B158DRAFT_1541 0.80 +0.5 1,596,813 + B158DRAFT_1541 0.80 +0.4 1,596,813 + B158DRAFT_1541 0.80 -1.3 1,596,818 + B158DRAFT_1541 0.80 +1.0 1,596,821 - B158DRAFT_1541 0.81 -0.4 1,596,826 - B158DRAFT_1541 0.81 -1.9 1,596,851 + B158DRAFT_1541 0.85 -2.0 1,596,901 - -2.9 1,596,927 - +0.1 1,596,981 + -0.5 1,596,981 + -0.2 1,596,981 + +1.1 1,596,989 - -0.4 1,596,989 - +0.8 1,596,989 - -3.1 1,597,000 + -0.9 1,597,010 + -1.9 1,597,010 + +1.3 1,597,016 + -3.3 1,597,016 + -1.5 1,597,018 - +2.8 1,597,019 - -1.9 1,597,046 + -1.2 1,597,068 + -0.5 1,597,069 - -2.5 1,597,069 - +1.5 1,597,073 + +0.0 1,597,073 + +0.3 1,597,092 - +0.7 1,597,150 - -0.0 1,597,152 + -1.8 1,597,174 - -2.6 1,597,193 - +0.3 1,597,194 + -0.2 1,597,202 - +0.3 1,597,204 - +0.0 1,597,271 + B158DRAFT_1542 0.13 -1.0 1,597,279 - B158DRAFT_1542 0.13 -1.7 1,597,279 - B158DRAFT_1542 0.13 +0.2 1,597,279 - B158DRAFT_1542 0.13 -0.5 1,597,279 - B158DRAFT_1542 0.13 -0.5 1,597,279 - B158DRAFT_1542 0.13 -0.5 1,597,279 - B158DRAFT_1542 0.13 -2.6 1,597,279 - B158DRAFT_1542 0.13 -0.1 1,597,279 - B158DRAFT_1542 0.13 +0.0 1,597,279 - B158DRAFT_1542 0.13 -1.3 1,597,279 - B158DRAFT_1542 0.13 -0.2 1,597,314 + B158DRAFT_1542 0.15 -0.6 1,597,336 - B158DRAFT_1542 0.16 +0.1 1,597,336 - B158DRAFT_1542 0.16 +0.1 1,597,347 + B158DRAFT_1542 0.16 -1.9 1,597,350 - B158DRAFT_1542 0.16 -0.6 1,597,362 + B158DRAFT_1542 0.17 +0.4 1,597,436 + B158DRAFT_1542 0.20 -1.1 1,597,467 - B158DRAFT_1542 0.21 -0.7 1,597,485 + B158DRAFT_1542 0.22 +0.9 1,597,488 - B158DRAFT_1542 0.22 +0.5 1,597,490 + B158DRAFT_1542 0.22 -1.1 1,597,490 + B158DRAFT_1542 0.22 -0.3 1,597,493 - B158DRAFT_1542 0.22 -0.7 1,597,498 - B158DRAFT_1542 0.22 -0.4 1,597,559 + B158DRAFT_1542 0.25 +0.5 1,597,559 + B158DRAFT_1542 0.25 -1.4 1,597,559 + B158DRAFT_1542 0.25 -1.8 1,597,559 + B158DRAFT_1542 0.25 -0.1 1,597,559 + B158DRAFT_1542 0.25 +0.9 1,597,559 + B158DRAFT_1542 0.25 -0.4 1,597,567 - B158DRAFT_1542 0.25 -2.2 1,597,567 - B158DRAFT_1542 0.25 -0.7 1,597,574 - B158DRAFT_1542 0.26 -2.0 1,597,815 + B158DRAFT_1542 0.36 -0.6 1,597,820 + B158DRAFT_1542 0.36 -0.6 1,597,835 - B158DRAFT_1542 0.37 +0.8 1,597,836 + B158DRAFT_1542 0.37 -1.4 1,597,844 - B158DRAFT_1542 0.37 +0.7 1,597,844 - B158DRAFT_1542 0.37 +0.4 1,597,871 + B158DRAFT_1542 0.38 +0.1 1,597,872 + B158DRAFT_1542 0.38 -1.0 1,597,879 - B158DRAFT_1542 0.38 -1.0 1,597,888 + B158DRAFT_1542 0.39 -0.1 1,597,926 - B158DRAFT_1542 0.40 +1.5 1,597,932 + B158DRAFT_1542 0.41 -1.5
Or see this region's nucleotide sequence