Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1385

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1384 and B158DRAFT_1385 overlap by 11 nucleotidesB158DRAFT_1385 and B158DRAFT_1386 are separated by 722 nucleotidesB158DRAFT_1386 and B158DRAFT_1387 are separated by 81 nucleotides B158DRAFT_1384: B158DRAFT_1384 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 1,429,010 to 1,430,071 _1384 B158DRAFT_1385: B158DRAFT_1385 - Prephenate dehydratase, at 1,430,061 to 1,431,263 _1385 B158DRAFT_1386: B158DRAFT_1386 - phage shock protein C (PspC) family protein, at 1,431,986 to 1,432,165 _1386 B158DRAFT_1387: B158DRAFT_1387 - gamma-glutamyltranspeptidase, at 1,432,247 to 1,433,989 _1387 Position (kb) 1430 1431 1432Strain fitness (log2 ratio) -2 -1 0 1 2at 1429.070 kb on + strandat 1429.102 kb on - strandat 1429.160 kb on - strand, within B158DRAFT_1384at 1429.208 kb on + strand, within B158DRAFT_1384at 1429.269 kb on - strand, within B158DRAFT_1384at 1429.289 kb on - strand, within B158DRAFT_1384at 1429.377 kb on + strand, within B158DRAFT_1384at 1429.387 kb on - strand, within B158DRAFT_1384at 1429.390 kb on - strand, within B158DRAFT_1384at 1429.391 kb on + strand, within B158DRAFT_1384at 1429.500 kb on + strand, within B158DRAFT_1384at 1429.500 kb on + strand, within B158DRAFT_1384at 1429.500 kb on + strand, within B158DRAFT_1384at 1429.500 kb on + strand, within B158DRAFT_1384at 1429.508 kb on - strand, within B158DRAFT_1384at 1429.508 kb on - strand, within B158DRAFT_1384at 1429.508 kb on - strand, within B158DRAFT_1384at 1429.508 kb on - strand, within B158DRAFT_1384at 1429.508 kb on - strand, within B158DRAFT_1384at 1429.520 kb on - strand, within B158DRAFT_1384at 1429.531 kb on + strand, within B158DRAFT_1384at 1429.533 kb on + strand, within B158DRAFT_1384at 1429.533 kb on + strand, within B158DRAFT_1384at 1429.574 kb on - strand, within B158DRAFT_1384at 1429.615 kb on + strand, within B158DRAFT_1384at 1429.642 kb on + strand, within B158DRAFT_1384at 1429.642 kb on + strand, within B158DRAFT_1384at 1429.650 kb on - strand, within B158DRAFT_1384at 1429.729 kb on - strand, within B158DRAFT_1384at 1429.799 kb on + strand, within B158DRAFT_1384at 1429.799 kb on + strand, within B158DRAFT_1384at 1429.959 kb on + strand, within B158DRAFT_1384at 1430.048 kb on - strandat 1430.182 kb on + strand, within B158DRAFT_1385at 1430.253 kb on - strand, within B158DRAFT_1385at 1430.253 kb on - strand, within B158DRAFT_1385at 1430.253 kb on - strand, within B158DRAFT_1385at 1430.312 kb on + strand, within B158DRAFT_1385at 1430.320 kb on - strand, within B158DRAFT_1385at 1430.337 kb on + strand, within B158DRAFT_1385at 1430.602 kb on - strand, within B158DRAFT_1385at 1430.626 kb on + strand, within B158DRAFT_1385at 1430.672 kb on + strand, within B158DRAFT_1385at 1430.672 kb on + strand, within B158DRAFT_1385at 1430.672 kb on + strand, within B158DRAFT_1385at 1430.680 kb on - strand, within B158DRAFT_1385at 1430.680 kb on - strand, within B158DRAFT_1385at 1430.799 kb on + strand, within B158DRAFT_1385at 1430.799 kb on + strand, within B158DRAFT_1385at 1430.799 kb on + strand, within B158DRAFT_1385at 1430.807 kb on - strand, within B158DRAFT_1385at 1430.807 kb on - strand, within B158DRAFT_1385at 1430.807 kb on - strand, within B158DRAFT_1385at 1431.158 kb on + strandat 1431.158 kb on + strandat 1431.246 kb on + strandat 1431.283 kb on - strandat 1431.384 kb on + strandat 1431.392 kb on - strandat 1431.459 kb on - strandat 1431.513 kb on + strandat 1431.620 kb on + strandat 1431.784 kb on + strandat 1431.843 kb on + strandat 1431.846 kb on - strandat 1431.851 kb on + strandat 1431.859 kb on - strandat 1431.951 kb on + strandat 1432.248 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,429,070 + -1.9
1,429,102 - -0.5
1,429,160 - B158DRAFT_1384 0.14 -1.1
1,429,208 + B158DRAFT_1384 0.19 +0.1
1,429,269 - B158DRAFT_1384 0.24 -1.2
1,429,289 - B158DRAFT_1384 0.26 -1.0
1,429,377 + B158DRAFT_1384 0.35 -0.8
1,429,387 - B158DRAFT_1384 0.35 +0.6
1,429,390 - B158DRAFT_1384 0.36 -0.9
1,429,391 + B158DRAFT_1384 0.36 -2.2
1,429,500 + B158DRAFT_1384 0.46 -0.3
1,429,500 + B158DRAFT_1384 0.46 -0.8
1,429,500 + B158DRAFT_1384 0.46 -1.0
1,429,500 + B158DRAFT_1384 0.46 +1.6
1,429,508 - B158DRAFT_1384 0.47 -1.1
1,429,508 - B158DRAFT_1384 0.47 +1.9
1,429,508 - B158DRAFT_1384 0.47 +0.3
1,429,508 - B158DRAFT_1384 0.47 -0.5
1,429,508 - B158DRAFT_1384 0.47 -2.1
1,429,520 - B158DRAFT_1384 0.48 +1.8
1,429,531 + B158DRAFT_1384 0.49 -2.0
1,429,533 + B158DRAFT_1384 0.49 -2.2
1,429,533 + B158DRAFT_1384 0.49 +0.9
1,429,574 - B158DRAFT_1384 0.53 -0.7
1,429,615 + B158DRAFT_1384 0.57 -0.2
1,429,642 + B158DRAFT_1384 0.60 -0.2
1,429,642 + B158DRAFT_1384 0.60 -2.4
1,429,650 - B158DRAFT_1384 0.60 +0.9
1,429,729 - B158DRAFT_1384 0.68 +0.2
1,429,799 + B158DRAFT_1384 0.74 -1.0
1,429,799 + B158DRAFT_1384 0.74 -0.0
1,429,959 + B158DRAFT_1384 0.89 +0.5
1,430,048 - -0.7
1,430,182 + B158DRAFT_1385 0.10 -0.2
1,430,253 - B158DRAFT_1385 0.16 -2.1
1,430,253 - B158DRAFT_1385 0.16 -0.4
1,430,253 - B158DRAFT_1385 0.16 -0.4
1,430,312 + B158DRAFT_1385 0.21 +0.6
1,430,320 - B158DRAFT_1385 0.22 -0.5
1,430,337 + B158DRAFT_1385 0.23 -0.0
1,430,602 - B158DRAFT_1385 0.45 +1.6
1,430,626 + B158DRAFT_1385 0.47 -1.4
1,430,672 + B158DRAFT_1385 0.51 -0.4
1,430,672 + B158DRAFT_1385 0.51 -0.9
1,430,672 + B158DRAFT_1385 0.51 -1.4
1,430,680 - B158DRAFT_1385 0.51 -0.8
1,430,680 - B158DRAFT_1385 0.51 -0.8
1,430,799 + B158DRAFT_1385 0.61 -1.0
1,430,799 + B158DRAFT_1385 0.61 -0.0
1,430,799 + B158DRAFT_1385 0.61 +0.5
1,430,807 - B158DRAFT_1385 0.62 -0.3
1,430,807 - B158DRAFT_1385 0.62 -1.1
1,430,807 - B158DRAFT_1385 0.62 +0.8
1,431,158 + -0.9
1,431,158 + +1.1
1,431,246 + -1.8
1,431,283 - +0.7
1,431,384 + -1.9
1,431,392 - -1.9
1,431,459 - -2.1
1,431,513 + -1.5
1,431,620 + -1.2
1,431,784 + +0.4
1,431,843 + +0.8
1,431,846 - -1.3
1,431,851 + -0.8
1,431,859 - -0.7
1,431,951 + -0.5
1,432,248 - -1.1

Or see this region's nucleotide sequence