Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1384 and B158DRAFT_1385 overlap by 11 nucleotides B158DRAFT_1385 and B158DRAFT_1386 are separated by 722 nucleotides B158DRAFT_1386 and B158DRAFT_1387 are separated by 81 nucleotides
B158DRAFT_1384: B158DRAFT_1384 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 1,429,010 to 1,430,071
_1384
B158DRAFT_1385: B158DRAFT_1385 - Prephenate dehydratase, at 1,430,061 to 1,431,263
_1385
B158DRAFT_1386: B158DRAFT_1386 - phage shock protein C (PspC) family protein, at 1,431,986 to 1,432,165
_1386
B158DRAFT_1387: B158DRAFT_1387 - gamma-glutamyltranspeptidase, at 1,432,247 to 1,433,989
_1387
Position (kb)
1430
1431
1432 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1429.070 kb on + strand at 1429.102 kb on - strand at 1429.160 kb on - strand, within B158DRAFT_1384 at 1429.208 kb on + strand, within B158DRAFT_1384 at 1429.269 kb on - strand, within B158DRAFT_1384 at 1429.289 kb on - strand, within B158DRAFT_1384 at 1429.377 kb on + strand, within B158DRAFT_1384 at 1429.387 kb on - strand, within B158DRAFT_1384 at 1429.390 kb on - strand, within B158DRAFT_1384 at 1429.391 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.500 kb on + strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.508 kb on - strand, within B158DRAFT_1384 at 1429.520 kb on - strand, within B158DRAFT_1384 at 1429.531 kb on + strand, within B158DRAFT_1384 at 1429.533 kb on + strand, within B158DRAFT_1384 at 1429.533 kb on + strand, within B158DRAFT_1384 at 1429.574 kb on - strand, within B158DRAFT_1384 at 1429.615 kb on + strand, within B158DRAFT_1384 at 1429.642 kb on + strand, within B158DRAFT_1384 at 1429.642 kb on + strand, within B158DRAFT_1384 at 1429.650 kb on - strand, within B158DRAFT_1384 at 1429.729 kb on - strand, within B158DRAFT_1384 at 1429.799 kb on + strand, within B158DRAFT_1384 at 1429.799 kb on + strand, within B158DRAFT_1384 at 1429.959 kb on + strand, within B158DRAFT_1384 at 1430.048 kb on - strand at 1430.182 kb on + strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.253 kb on - strand, within B158DRAFT_1385 at 1430.312 kb on + strand, within B158DRAFT_1385 at 1430.320 kb on - strand, within B158DRAFT_1385 at 1430.337 kb on + strand, within B158DRAFT_1385 at 1430.602 kb on - strand, within B158DRAFT_1385 at 1430.626 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.672 kb on + strand, within B158DRAFT_1385 at 1430.680 kb on - strand, within B158DRAFT_1385 at 1430.680 kb on - strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.799 kb on + strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1430.807 kb on - strand, within B158DRAFT_1385 at 1431.158 kb on + strand at 1431.158 kb on + strand at 1431.246 kb on + strand at 1431.283 kb on - strand at 1431.384 kb on + strand at 1431.392 kb on - strand at 1431.459 kb on - strand at 1431.513 kb on + strand at 1431.620 kb on + strand at 1431.784 kb on + strand at 1431.843 kb on + strand at 1431.846 kb on - strand at 1431.851 kb on + strand at 1431.859 kb on - strand at 1431.951 kb on + strand at 1432.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,429,070 + -1.9 1,429,102 - -0.5 1,429,160 - B158DRAFT_1384 0.14 -1.1 1,429,208 + B158DRAFT_1384 0.19 +0.1 1,429,269 - B158DRAFT_1384 0.24 -1.2 1,429,289 - B158DRAFT_1384 0.26 -1.0 1,429,377 + B158DRAFT_1384 0.35 -0.8 1,429,387 - B158DRAFT_1384 0.35 +0.6 1,429,390 - B158DRAFT_1384 0.36 -0.9 1,429,391 + B158DRAFT_1384 0.36 -2.2 1,429,500 + B158DRAFT_1384 0.46 -0.3 1,429,500 + B158DRAFT_1384 0.46 -0.8 1,429,500 + B158DRAFT_1384 0.46 -1.0 1,429,500 + B158DRAFT_1384 0.46 +1.6 1,429,508 - B158DRAFT_1384 0.47 -1.1 1,429,508 - B158DRAFT_1384 0.47 +1.9 1,429,508 - B158DRAFT_1384 0.47 +0.3 1,429,508 - B158DRAFT_1384 0.47 -0.5 1,429,508 - B158DRAFT_1384 0.47 -2.1 1,429,520 - B158DRAFT_1384 0.48 +1.8 1,429,531 + B158DRAFT_1384 0.49 -2.0 1,429,533 + B158DRAFT_1384 0.49 -2.2 1,429,533 + B158DRAFT_1384 0.49 +0.9 1,429,574 - B158DRAFT_1384 0.53 -0.7 1,429,615 + B158DRAFT_1384 0.57 -0.2 1,429,642 + B158DRAFT_1384 0.60 -0.2 1,429,642 + B158DRAFT_1384 0.60 -2.4 1,429,650 - B158DRAFT_1384 0.60 +0.9 1,429,729 - B158DRAFT_1384 0.68 +0.2 1,429,799 + B158DRAFT_1384 0.74 -1.0 1,429,799 + B158DRAFT_1384 0.74 -0.0 1,429,959 + B158DRAFT_1384 0.89 +0.5 1,430,048 - -0.7 1,430,182 + B158DRAFT_1385 0.10 -0.2 1,430,253 - B158DRAFT_1385 0.16 -2.1 1,430,253 - B158DRAFT_1385 0.16 -0.4 1,430,253 - B158DRAFT_1385 0.16 -0.4 1,430,312 + B158DRAFT_1385 0.21 +0.6 1,430,320 - B158DRAFT_1385 0.22 -0.5 1,430,337 + B158DRAFT_1385 0.23 -0.0 1,430,602 - B158DRAFT_1385 0.45 +1.6 1,430,626 + B158DRAFT_1385 0.47 -1.4 1,430,672 + B158DRAFT_1385 0.51 -0.4 1,430,672 + B158DRAFT_1385 0.51 -0.9 1,430,672 + B158DRAFT_1385 0.51 -1.4 1,430,680 - B158DRAFT_1385 0.51 -0.8 1,430,680 - B158DRAFT_1385 0.51 -0.8 1,430,799 + B158DRAFT_1385 0.61 -1.0 1,430,799 + B158DRAFT_1385 0.61 -0.0 1,430,799 + B158DRAFT_1385 0.61 +0.5 1,430,807 - B158DRAFT_1385 0.62 -0.3 1,430,807 - B158DRAFT_1385 0.62 -1.1 1,430,807 - B158DRAFT_1385 0.62 +0.8 1,431,158 + -0.9 1,431,158 + +1.1 1,431,246 + -1.8 1,431,283 - +0.7 1,431,384 + -1.9 1,431,392 - -1.9 1,431,459 - -2.1 1,431,513 + -1.5 1,431,620 + -1.2 1,431,784 + +0.4 1,431,843 + +0.8 1,431,846 - -1.3 1,431,851 + -0.8 1,431,859 - -0.7 1,431,951 + -0.5 1,432,248 - -1.1
Or see this region's nucleotide sequence