Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1356 and B158DRAFT_1357 are separated by 82 nucleotides B158DRAFT_1357 and B158DRAFT_1358 are separated by 94 nucleotides B158DRAFT_1358 and B158DRAFT_1359 are separated by 170 nucleotides
B158DRAFT_1356: B158DRAFT_1356 - CAAX amino terminal protease family., at 1,400,618 to 1,401,205
_1356
B158DRAFT_1357: B158DRAFT_1357 - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, at 1,401,288 to 1,401,917
_1357
B158DRAFT_1358: B158DRAFT_1358 - 2-methylcitrate dehydratase (EC 4.2.1.79), at 1,402,012 to 1,403,457
_1358
B158DRAFT_1359: B158DRAFT_1359 - hypothetical protein, at 1,403,628 to 1,405,550
_1359
Position (kb)
1402
1403
1404 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1401.021 kb on + strand, within B158DRAFT_1356 at 1401.102 kb on - strand, within B158DRAFT_1356 at 1401.109 kb on - strand, within B158DRAFT_1356 at 1401.172 kb on - strand at 1401.181 kb on + strand at 1401.201 kb on - strand at 1401.250 kb on + strand at 1401.258 kb on - strand at 1401.385 kb on + strand, within B158DRAFT_1357 at 1401.422 kb on + strand, within B158DRAFT_1357 at 1401.430 kb on + strand, within B158DRAFT_1357 at 1401.430 kb on + strand, within B158DRAFT_1357 at 1401.450 kb on + strand, within B158DRAFT_1357 at 1401.456 kb on + strand, within B158DRAFT_1357 at 1401.458 kb on - strand, within B158DRAFT_1357 at 1401.466 kb on + strand, within B158DRAFT_1357 at 1401.529 kb on - strand, within B158DRAFT_1357 at 1401.538 kb on - strand, within B158DRAFT_1357 at 1401.553 kb on - strand, within B158DRAFT_1357 at 1401.557 kb on + strand, within B158DRAFT_1357 at 1401.567 kb on + strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.576 kb on + strand, within B158DRAFT_1357 at 1401.581 kb on - strand, within B158DRAFT_1357 at 1401.584 kb on - strand, within B158DRAFT_1357 at 1401.584 kb on - strand, within B158DRAFT_1357 at 1401.739 kb on - strand, within B158DRAFT_1357 at 1401.883 kb on - strand at 1401.892 kb on + strand at 1401.900 kb on - strand at 1401.900 kb on - strand at 1401.925 kb on + strand at 1401.925 kb on + strand at 1401.925 kb on + strand at 1401.933 kb on - strand at 1402.008 kb on + strand at 1402.008 kb on + strand at 1402.017 kb on - strand at 1402.056 kb on + strand at 1402.089 kb on - strand at 1402.101 kb on - strand at 1402.109 kb on + strand at 1402.157 kb on - strand, within B158DRAFT_1358 at 1402.170 kb on + strand, within B158DRAFT_1358 at 1402.170 kb on + strand, within B158DRAFT_1358 at 1402.178 kb on - strand, within B158DRAFT_1358 at 1402.183 kb on - strand, within B158DRAFT_1358 at 1402.183 kb on - strand, within B158DRAFT_1358 at 1402.194 kb on + strand, within B158DRAFT_1358 at 1402.202 kb on - strand, within B158DRAFT_1358 at 1402.262 kb on - strand, within B158DRAFT_1358 at 1402.379 kb on + strand, within B158DRAFT_1358 at 1402.500 kb on - strand, within B158DRAFT_1358 at 1402.534 kb on - strand, within B158DRAFT_1358 at 1402.558 kb on + strand, within B158DRAFT_1358 at 1402.566 kb on - strand, within B158DRAFT_1358 at 1402.656 kb on + strand, within B158DRAFT_1358 at 1402.657 kb on + strand, within B158DRAFT_1358 at 1402.664 kb on - strand, within B158DRAFT_1358 at 1402.708 kb on - strand, within B158DRAFT_1358 at 1402.720 kb on + strand, within B158DRAFT_1358 at 1402.741 kb on + strand, within B158DRAFT_1358 at 1402.746 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.773 kb on + strand, within B158DRAFT_1358 at 1402.781 kb on - strand, within B158DRAFT_1358 at 1402.781 kb on - strand, within B158DRAFT_1358 at 1402.781 kb on - strand, within B158DRAFT_1358 at 1402.781 kb on - strand, within B158DRAFT_1358 at 1402.781 kb on - strand, within B158DRAFT_1358 at 1402.945 kb on + strand, within B158DRAFT_1358 at 1403.071 kb on + strand, within B158DRAFT_1358 at 1403.172 kb on + strand, within B158DRAFT_1358 at 1403.301 kb on + strand, within B158DRAFT_1358 at 1403.494 kb on + strand at 1403.500 kb on + strand at 1403.500 kb on + strand at 1403.535 kb on + strand at 1403.564 kb on + strand at 1403.632 kb on - strand at 1403.754 kb on + strand at 1403.784 kb on + strand at 1403.926 kb on + strand, within B158DRAFT_1359 at 1403.998 kb on + strand, within B158DRAFT_1359 at 1404.006 kb on - strand, within B158DRAFT_1359 at 1404.006 kb on - strand, within B158DRAFT_1359 at 1404.006 kb on - strand, within B158DRAFT_1359 at 1404.006 kb on - strand, within B158DRAFT_1359 at 1404.034 kb on + strand, within B158DRAFT_1359 at 1404.038 kb on + strand, within B158DRAFT_1359 at 1404.055 kb on - strand, within B158DRAFT_1359 at 1404.241 kb on - strand, within B158DRAFT_1359 at 1404.268 kb on - strand, within B158DRAFT_1359 at 1404.325 kb on - strand, within B158DRAFT_1359 at 1404.354 kb on + strand, within B158DRAFT_1359 at 1404.361 kb on + strand, within B158DRAFT_1359 at 1404.369 kb on - strand, within B158DRAFT_1359
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,401,021 + B158DRAFT_1356 0.69 +0.0 1,401,102 - B158DRAFT_1356 0.82 -1.2 1,401,109 - B158DRAFT_1356 0.84 +0.3 1,401,172 - -0.9 1,401,181 + -0.2 1,401,201 - -0.9 1,401,250 + -1.9 1,401,258 - +0.1 1,401,385 + B158DRAFT_1357 0.15 -1.6 1,401,422 + B158DRAFT_1357 0.21 +0.6 1,401,430 + B158DRAFT_1357 0.23 -2.5 1,401,430 + B158DRAFT_1357 0.23 -1.7 1,401,450 + B158DRAFT_1357 0.26 +0.1 1,401,456 + B158DRAFT_1357 0.27 +0.0 1,401,458 - B158DRAFT_1357 0.27 +0.2 1,401,466 + B158DRAFT_1357 0.28 -1.2 1,401,529 - B158DRAFT_1357 0.38 +0.1 1,401,538 - B158DRAFT_1357 0.40 +1.8 1,401,553 - B158DRAFT_1357 0.42 -0.6 1,401,557 + B158DRAFT_1357 0.43 -3.1 1,401,567 + B158DRAFT_1357 0.44 +0.5 1,401,575 - B158DRAFT_1357 0.46 -0.4 1,401,575 - B158DRAFT_1357 0.46 -1.1 1,401,575 - B158DRAFT_1357 0.46 +0.5 1,401,576 + B158DRAFT_1357 0.46 -1.2 1,401,581 - B158DRAFT_1357 0.47 -1.4 1,401,584 - B158DRAFT_1357 0.47 -0.0 1,401,584 - B158DRAFT_1357 0.47 -0.3 1,401,739 - B158DRAFT_1357 0.72 +0.3 1,401,883 - -0.8 1,401,892 + -1.7 1,401,900 - +0.5 1,401,900 - -0.5 1,401,925 + +0.4 1,401,925 + -0.8 1,401,925 + -1.2 1,401,933 - -0.1 1,402,008 + -1.4 1,402,008 + +0.8 1,402,017 - +0.9 1,402,056 + +0.6 1,402,089 - -1.8 1,402,101 - +0.7 1,402,109 + -0.7 1,402,157 - B158DRAFT_1358 0.10 +2.2 1,402,170 + B158DRAFT_1358 0.11 +0.7 1,402,170 + B158DRAFT_1358 0.11 -0.3 1,402,178 - B158DRAFT_1358 0.11 +0.2 1,402,183 - B158DRAFT_1358 0.12 -0.5 1,402,183 - B158DRAFT_1358 0.12 -1.9 1,402,194 + B158DRAFT_1358 0.13 -1.1 1,402,202 - B158DRAFT_1358 0.13 -0.9 1,402,262 - B158DRAFT_1358 0.17 +1.5 1,402,379 + B158DRAFT_1358 0.25 +1.8 1,402,500 - B158DRAFT_1358 0.34 +1.6 1,402,534 - B158DRAFT_1358 0.36 -0.9 1,402,558 + B158DRAFT_1358 0.38 -1.5 1,402,566 - B158DRAFT_1358 0.38 -1.7 1,402,656 + B158DRAFT_1358 0.45 -1.6 1,402,657 + B158DRAFT_1358 0.45 -0.9 1,402,664 - B158DRAFT_1358 0.45 -0.7 1,402,708 - B158DRAFT_1358 0.48 +1.5 1,402,720 + B158DRAFT_1358 0.49 -0.5 1,402,741 + B158DRAFT_1358 0.50 -1.4 1,402,746 + B158DRAFT_1358 0.51 -1.1 1,402,773 + B158DRAFT_1358 0.53 +0.6 1,402,773 + B158DRAFT_1358 0.53 -0.2 1,402,773 + B158DRAFT_1358 0.53 -0.6 1,402,773 + B158DRAFT_1358 0.53 +0.6 1,402,773 + B158DRAFT_1358 0.53 -1.3 1,402,773 + B158DRAFT_1358 0.53 +0.9 1,402,773 + B158DRAFT_1358 0.53 +0.7 1,402,773 + B158DRAFT_1358 0.53 -1.6 1,402,773 + B158DRAFT_1358 0.53 -1.0 1,402,781 - B158DRAFT_1358 0.53 +0.3 1,402,781 - B158DRAFT_1358 0.53 -0.9 1,402,781 - B158DRAFT_1358 0.53 +0.9 1,402,781 - B158DRAFT_1358 0.53 +0.4 1,402,781 - B158DRAFT_1358 0.53 -0.9 1,402,945 + B158DRAFT_1358 0.65 +1.8 1,403,071 + B158DRAFT_1358 0.73 -0.1 1,403,172 + B158DRAFT_1358 0.80 -0.7 1,403,301 + B158DRAFT_1358 0.89 -1.5 1,403,494 + +2.5 1,403,500 + -0.7 1,403,500 + -1.2 1,403,535 + -1.5 1,403,564 + -2.1 1,403,632 - -3.2 1,403,754 + +2.3 1,403,784 + +0.1 1,403,926 + B158DRAFT_1359 0.15 -1.4 1,403,998 + B158DRAFT_1359 0.19 +0.6 1,404,006 - B158DRAFT_1359 0.20 -0.9 1,404,006 - B158DRAFT_1359 0.20 -0.7 1,404,006 - B158DRAFT_1359 0.20 +0.3 1,404,006 - B158DRAFT_1359 0.20 +0.1 1,404,034 + B158DRAFT_1359 0.21 -1.5 1,404,038 + B158DRAFT_1359 0.21 -1.5 1,404,055 - B158DRAFT_1359 0.22 +2.0 1,404,241 - B158DRAFT_1359 0.32 -0.4 1,404,268 - B158DRAFT_1359 0.33 +0.7 1,404,325 - B158DRAFT_1359 0.36 -1.0 1,404,354 + B158DRAFT_1359 0.38 +0.6 1,404,361 + B158DRAFT_1359 0.38 -1.8 1,404,369 - B158DRAFT_1359 0.39 +1.5
Or see this region's nucleotide sequence