Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1358

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1356 and B158DRAFT_1357 are separated by 82 nucleotidesB158DRAFT_1357 and B158DRAFT_1358 are separated by 94 nucleotidesB158DRAFT_1358 and B158DRAFT_1359 are separated by 170 nucleotides B158DRAFT_1356: B158DRAFT_1356 - CAAX amino terminal protease family., at 1,400,618 to 1,401,205 _1356 B158DRAFT_1357: B158DRAFT_1357 - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, at 1,401,288 to 1,401,917 _1357 B158DRAFT_1358: B158DRAFT_1358 - 2-methylcitrate dehydratase (EC 4.2.1.79), at 1,402,012 to 1,403,457 _1358 B158DRAFT_1359: B158DRAFT_1359 - hypothetical protein, at 1,403,628 to 1,405,550 _1359 Position (kb) 1402 1403 1404Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1401.021 kb on + strand, within B158DRAFT_1356at 1401.102 kb on - strand, within B158DRAFT_1356at 1401.109 kb on - strand, within B158DRAFT_1356at 1401.172 kb on - strandat 1401.181 kb on + strandat 1401.201 kb on - strandat 1401.250 kb on + strandat 1401.258 kb on - strandat 1401.385 kb on + strand, within B158DRAFT_1357at 1401.422 kb on + strand, within B158DRAFT_1357at 1401.430 kb on + strand, within B158DRAFT_1357at 1401.430 kb on + strand, within B158DRAFT_1357at 1401.450 kb on + strand, within B158DRAFT_1357at 1401.456 kb on + strand, within B158DRAFT_1357at 1401.458 kb on - strand, within B158DRAFT_1357at 1401.466 kb on + strand, within B158DRAFT_1357at 1401.529 kb on - strand, within B158DRAFT_1357at 1401.538 kb on - strand, within B158DRAFT_1357at 1401.553 kb on - strand, within B158DRAFT_1357at 1401.557 kb on + strand, within B158DRAFT_1357at 1401.567 kb on + strand, within B158DRAFT_1357at 1401.575 kb on - strand, within B158DRAFT_1357at 1401.575 kb on - strand, within B158DRAFT_1357at 1401.575 kb on - strand, within B158DRAFT_1357at 1401.576 kb on + strand, within B158DRAFT_1357at 1401.581 kb on - strand, within B158DRAFT_1357at 1401.584 kb on - strand, within B158DRAFT_1357at 1401.584 kb on - strand, within B158DRAFT_1357at 1401.739 kb on - strand, within B158DRAFT_1357at 1401.883 kb on - strandat 1401.892 kb on + strandat 1401.900 kb on - strandat 1401.900 kb on - strandat 1401.925 kb on + strandat 1401.925 kb on + strandat 1401.925 kb on + strandat 1401.933 kb on - strandat 1402.008 kb on + strandat 1402.008 kb on + strandat 1402.017 kb on - strandat 1402.056 kb on + strandat 1402.089 kb on - strandat 1402.101 kb on - strandat 1402.109 kb on + strandat 1402.157 kb on - strand, within B158DRAFT_1358at 1402.170 kb on + strand, within B158DRAFT_1358at 1402.170 kb on + strand, within B158DRAFT_1358at 1402.178 kb on - strand, within B158DRAFT_1358at 1402.183 kb on - strand, within B158DRAFT_1358at 1402.183 kb on - strand, within B158DRAFT_1358at 1402.194 kb on + strand, within B158DRAFT_1358at 1402.202 kb on - strand, within B158DRAFT_1358at 1402.262 kb on - strand, within B158DRAFT_1358at 1402.379 kb on + strand, within B158DRAFT_1358at 1402.500 kb on - strand, within B158DRAFT_1358at 1402.534 kb on - strand, within B158DRAFT_1358at 1402.558 kb on + strand, within B158DRAFT_1358at 1402.566 kb on - strand, within B158DRAFT_1358at 1402.656 kb on + strand, within B158DRAFT_1358at 1402.657 kb on + strand, within B158DRAFT_1358at 1402.664 kb on - strand, within B158DRAFT_1358at 1402.708 kb on - strand, within B158DRAFT_1358at 1402.720 kb on + strand, within B158DRAFT_1358at 1402.741 kb on + strand, within B158DRAFT_1358at 1402.746 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.773 kb on + strand, within B158DRAFT_1358at 1402.781 kb on - strand, within B158DRAFT_1358at 1402.781 kb on - strand, within B158DRAFT_1358at 1402.781 kb on - strand, within B158DRAFT_1358at 1402.781 kb on - strand, within B158DRAFT_1358at 1402.781 kb on - strand, within B158DRAFT_1358at 1402.945 kb on + strand, within B158DRAFT_1358at 1403.071 kb on + strand, within B158DRAFT_1358at 1403.172 kb on + strand, within B158DRAFT_1358at 1403.301 kb on + strand, within B158DRAFT_1358at 1403.494 kb on + strandat 1403.500 kb on + strandat 1403.500 kb on + strandat 1403.535 kb on + strandat 1403.564 kb on + strandat 1403.632 kb on - strandat 1403.754 kb on + strandat 1403.784 kb on + strandat 1403.926 kb on + strand, within B158DRAFT_1359at 1403.998 kb on + strand, within B158DRAFT_1359at 1404.006 kb on - strand, within B158DRAFT_1359at 1404.006 kb on - strand, within B158DRAFT_1359at 1404.006 kb on - strand, within B158DRAFT_1359at 1404.006 kb on - strand, within B158DRAFT_1359at 1404.034 kb on + strand, within B158DRAFT_1359at 1404.038 kb on + strand, within B158DRAFT_1359at 1404.055 kb on - strand, within B158DRAFT_1359at 1404.241 kb on - strand, within B158DRAFT_1359at 1404.268 kb on - strand, within B158DRAFT_1359at 1404.325 kb on - strand, within B158DRAFT_1359at 1404.354 kb on + strand, within B158DRAFT_1359at 1404.361 kb on + strand, within B158DRAFT_1359at 1404.369 kb on - strand, within B158DRAFT_1359

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,401,021 + B158DRAFT_1356 0.69 +0.0
1,401,102 - B158DRAFT_1356 0.82 -1.2
1,401,109 - B158DRAFT_1356 0.84 +0.3
1,401,172 - -0.9
1,401,181 + -0.2
1,401,201 - -0.9
1,401,250 + -1.9
1,401,258 - +0.1
1,401,385 + B158DRAFT_1357 0.15 -1.6
1,401,422 + B158DRAFT_1357 0.21 +0.6
1,401,430 + B158DRAFT_1357 0.23 -2.5
1,401,430 + B158DRAFT_1357 0.23 -1.7
1,401,450 + B158DRAFT_1357 0.26 +0.1
1,401,456 + B158DRAFT_1357 0.27 +0.0
1,401,458 - B158DRAFT_1357 0.27 +0.2
1,401,466 + B158DRAFT_1357 0.28 -1.2
1,401,529 - B158DRAFT_1357 0.38 +0.1
1,401,538 - B158DRAFT_1357 0.40 +1.8
1,401,553 - B158DRAFT_1357 0.42 -0.6
1,401,557 + B158DRAFT_1357 0.43 -3.1
1,401,567 + B158DRAFT_1357 0.44 +0.5
1,401,575 - B158DRAFT_1357 0.46 -0.4
1,401,575 - B158DRAFT_1357 0.46 -1.1
1,401,575 - B158DRAFT_1357 0.46 +0.5
1,401,576 + B158DRAFT_1357 0.46 -1.2
1,401,581 - B158DRAFT_1357 0.47 -1.4
1,401,584 - B158DRAFT_1357 0.47 -0.0
1,401,584 - B158DRAFT_1357 0.47 -0.3
1,401,739 - B158DRAFT_1357 0.72 +0.3
1,401,883 - -0.8
1,401,892 + -1.7
1,401,900 - +0.5
1,401,900 - -0.5
1,401,925 + +0.4
1,401,925 + -0.8
1,401,925 + -1.2
1,401,933 - -0.1
1,402,008 + -1.4
1,402,008 + +0.8
1,402,017 - +0.9
1,402,056 + +0.6
1,402,089 - -1.8
1,402,101 - +0.7
1,402,109 + -0.7
1,402,157 - B158DRAFT_1358 0.10 +2.2
1,402,170 + B158DRAFT_1358 0.11 +0.7
1,402,170 + B158DRAFT_1358 0.11 -0.3
1,402,178 - B158DRAFT_1358 0.11 +0.2
1,402,183 - B158DRAFT_1358 0.12 -0.5
1,402,183 - B158DRAFT_1358 0.12 -1.9
1,402,194 + B158DRAFT_1358 0.13 -1.1
1,402,202 - B158DRAFT_1358 0.13 -0.9
1,402,262 - B158DRAFT_1358 0.17 +1.5
1,402,379 + B158DRAFT_1358 0.25 +1.8
1,402,500 - B158DRAFT_1358 0.34 +1.6
1,402,534 - B158DRAFT_1358 0.36 -0.9
1,402,558 + B158DRAFT_1358 0.38 -1.5
1,402,566 - B158DRAFT_1358 0.38 -1.7
1,402,656 + B158DRAFT_1358 0.45 -1.6
1,402,657 + B158DRAFT_1358 0.45 -0.9
1,402,664 - B158DRAFT_1358 0.45 -0.7
1,402,708 - B158DRAFT_1358 0.48 +1.5
1,402,720 + B158DRAFT_1358 0.49 -0.5
1,402,741 + B158DRAFT_1358 0.50 -1.4
1,402,746 + B158DRAFT_1358 0.51 -1.1
1,402,773 + B158DRAFT_1358 0.53 +0.6
1,402,773 + B158DRAFT_1358 0.53 -0.2
1,402,773 + B158DRAFT_1358 0.53 -0.6
1,402,773 + B158DRAFT_1358 0.53 +0.6
1,402,773 + B158DRAFT_1358 0.53 -1.3
1,402,773 + B158DRAFT_1358 0.53 +0.9
1,402,773 + B158DRAFT_1358 0.53 +0.7
1,402,773 + B158DRAFT_1358 0.53 -1.6
1,402,773 + B158DRAFT_1358 0.53 -1.0
1,402,781 - B158DRAFT_1358 0.53 +0.3
1,402,781 - B158DRAFT_1358 0.53 -0.9
1,402,781 - B158DRAFT_1358 0.53 +0.9
1,402,781 - B158DRAFT_1358 0.53 +0.4
1,402,781 - B158DRAFT_1358 0.53 -0.9
1,402,945 + B158DRAFT_1358 0.65 +1.8
1,403,071 + B158DRAFT_1358 0.73 -0.1
1,403,172 + B158DRAFT_1358 0.80 -0.7
1,403,301 + B158DRAFT_1358 0.89 -1.5
1,403,494 + +2.5
1,403,500 + -0.7
1,403,500 + -1.2
1,403,535 + -1.5
1,403,564 + -2.1
1,403,632 - -3.2
1,403,754 + +2.3
1,403,784 + +0.1
1,403,926 + B158DRAFT_1359 0.15 -1.4
1,403,998 + B158DRAFT_1359 0.19 +0.6
1,404,006 - B158DRAFT_1359 0.20 -0.9
1,404,006 - B158DRAFT_1359 0.20 -0.7
1,404,006 - B158DRAFT_1359 0.20 +0.3
1,404,006 - B158DRAFT_1359 0.20 +0.1
1,404,034 + B158DRAFT_1359 0.21 -1.5
1,404,038 + B158DRAFT_1359 0.21 -1.5
1,404,055 - B158DRAFT_1359 0.22 +2.0
1,404,241 - B158DRAFT_1359 0.32 -0.4
1,404,268 - B158DRAFT_1359 0.33 +0.7
1,404,325 - B158DRAFT_1359 0.36 -1.0
1,404,354 + B158DRAFT_1359 0.38 +0.6
1,404,361 + B158DRAFT_1359 0.38 -1.8
1,404,369 - B158DRAFT_1359 0.39 +1.5

Or see this region's nucleotide sequence