Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1354 and B158DRAFT_1355 are separated by 306 nucleotides B158DRAFT_1355 and B158DRAFT_1356 are separated by 103 nucleotides B158DRAFT_1356 and B158DRAFT_1357 are separated by 82 nucleotides B158DRAFT_1357 and B158DRAFT_1358 are separated by 94 nucleotides
B158DRAFT_1354: B158DRAFT_1354 - Glycine/D-amino acid oxidases (deaminating), at 1,398,505 to 1,399,788
_1354
B158DRAFT_1355: B158DRAFT_1355 - hypothetical protein, at 1,400,095 to 1,400,514
_1355
B158DRAFT_1356: B158DRAFT_1356 - CAAX amino terminal protease family., at 1,400,618 to 1,401,205
_1356
B158DRAFT_1357: B158DRAFT_1357 - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, at 1,401,288 to 1,401,917
_1357
B158DRAFT_1358: B158DRAFT_1358 - 2-methylcitrate dehydratase (EC 4.2.1.79), at 1,402,012 to 1,403,457
_1358
Position (kb)
1400
1401
1402 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1399.628 kb on + strand, within B158DRAFT_1354 at 1399.628 kb on + strand, within B158DRAFT_1354 at 1399.633 kb on + strand, within B158DRAFT_1354 at 1399.654 kb on + strand, within B158DRAFT_1354 at 1399.666 kb on + strand at 1399.666 kb on + strand at 1399.674 kb on - strand at 1399.689 kb on + strand at 1399.689 kb on + strand at 1399.699 kb on + strand at 1399.699 kb on + strand at 1399.699 kb on + strand at 1399.707 kb on - strand at 1399.834 kb on + strand at 1399.834 kb on + strand at 1399.834 kb on + strand at 1399.842 kb on - strand at 1399.842 kb on - strand at 1399.842 kb on - strand at 1399.879 kb on - strand at 1399.879 kb on - strand at 1399.879 kb on - strand at 1399.881 kb on + strand at 1400.012 kb on - strand at 1400.029 kb on - strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.047 kb on + strand at 1400.055 kb on - strand at 1400.127 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.148 kb on - strand, within B158DRAFT_1355 at 1400.214 kb on - strand, within B158DRAFT_1355 at 1400.385 kb on + strand, within B158DRAFT_1355 at 1400.388 kb on - strand, within B158DRAFT_1355 at 1400.467 kb on - strand, within B158DRAFT_1355 at 1400.533 kb on + strand at 1400.582 kb on + strand at 1400.582 kb on + strand at 1400.583 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.652 kb on - strand at 1400.667 kb on - strand at 1400.670 kb on + strand at 1400.747 kb on + strand, within B158DRAFT_1356 at 1400.747 kb on + strand, within B158DRAFT_1356 at 1400.822 kb on - strand, within B158DRAFT_1356 at 1400.893 kb on - strand, within B158DRAFT_1356 at 1400.942 kb on - strand, within B158DRAFT_1356 at 1400.942 kb on - strand, within B158DRAFT_1356 at 1401.001 kb on - strand, within B158DRAFT_1356 at 1401.021 kb on + strand, within B158DRAFT_1356 at 1401.102 kb on - strand, within B158DRAFT_1356 at 1401.109 kb on - strand, within B158DRAFT_1356 at 1401.172 kb on - strand at 1401.181 kb on + strand at 1401.201 kb on - strand at 1401.250 kb on + strand at 1401.258 kb on - strand at 1401.385 kb on + strand, within B158DRAFT_1357 at 1401.422 kb on + strand, within B158DRAFT_1357 at 1401.430 kb on + strand, within B158DRAFT_1357 at 1401.430 kb on + strand, within B158DRAFT_1357 at 1401.450 kb on + strand, within B158DRAFT_1357 at 1401.456 kb on + strand, within B158DRAFT_1357 at 1401.458 kb on - strand, within B158DRAFT_1357 at 1401.466 kb on + strand, within B158DRAFT_1357 at 1401.529 kb on - strand, within B158DRAFT_1357 at 1401.538 kb on - strand, within B158DRAFT_1357 at 1401.553 kb on - strand, within B158DRAFT_1357 at 1401.557 kb on + strand, within B158DRAFT_1357 at 1401.567 kb on + strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.575 kb on - strand, within B158DRAFT_1357 at 1401.576 kb on + strand, within B158DRAFT_1357 at 1401.581 kb on - strand, within B158DRAFT_1357 at 1401.584 kb on - strand, within B158DRAFT_1357 at 1401.584 kb on - strand, within B158DRAFT_1357 at 1401.739 kb on - strand, within B158DRAFT_1357 at 1401.883 kb on - strand at 1401.892 kb on + strand at 1401.900 kb on - strand at 1401.900 kb on - strand at 1401.925 kb on + strand at 1401.925 kb on + strand at 1401.925 kb on + strand at 1401.933 kb on - strand at 1402.008 kb on + strand at 1402.008 kb on + strand at 1402.017 kb on - strand at 1402.056 kb on + strand at 1402.089 kb on - strand at 1402.101 kb on - strand at 1402.109 kb on + strand at 1402.157 kb on - strand, within B158DRAFT_1358 at 1402.170 kb on + strand, within B158DRAFT_1358 at 1402.170 kb on + strand, within B158DRAFT_1358 at 1402.178 kb on - strand, within B158DRAFT_1358 at 1402.183 kb on - strand, within B158DRAFT_1358 at 1402.183 kb on - strand, within B158DRAFT_1358 at 1402.194 kb on + strand, within B158DRAFT_1358 at 1402.202 kb on - strand, within B158DRAFT_1358
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,399,628 + B158DRAFT_1354 0.87 +0.4 1,399,628 + B158DRAFT_1354 0.87 +0.3 1,399,633 + B158DRAFT_1354 0.88 -0.4 1,399,654 + B158DRAFT_1354 0.89 +1.5 1,399,666 + -0.3 1,399,666 + -0.5 1,399,674 - -1.0 1,399,689 + +0.4 1,399,689 + +0.4 1,399,699 + -1.0 1,399,699 + -0.6 1,399,699 + +0.3 1,399,707 - -0.3 1,399,834 + +1.3 1,399,834 + +2.5 1,399,834 + -1.0 1,399,842 - -1.5 1,399,842 - +0.1 1,399,842 - -2.2 1,399,879 - -0.4 1,399,879 - -1.5 1,399,879 - -1.0 1,399,881 + -0.2 1,400,012 - -0.7 1,400,029 - +1.8 1,400,031 + -1.5 1,400,031 + +0.0 1,400,031 + +0.6 1,400,031 + -2.4 1,400,031 + -1.4 1,400,031 + +0.5 1,400,039 - -0.6 1,400,039 - +1.6 1,400,039 - -0.6 1,400,039 - +3.7 1,400,047 + -1.0 1,400,055 - +0.7 1,400,127 + +0.2 1,400,129 + -0.2 1,400,129 + -0.2 1,400,129 + -2.2 1,400,129 + -1.5 1,400,129 + +0.6 1,400,129 + -0.6 1,400,129 + -0.1 1,400,129 + -1.7 1,400,129 + -0.2 1,400,129 + -0.4 1,400,137 - B158DRAFT_1355 0.10 +4.5 1,400,137 - B158DRAFT_1355 0.10 +0.5 1,400,137 - B158DRAFT_1355 0.10 -0.5 1,400,137 - B158DRAFT_1355 0.10 -1.1 1,400,137 - B158DRAFT_1355 0.10 -1.1 1,400,137 - B158DRAFT_1355 0.10 -2.3 1,400,137 - B158DRAFT_1355 0.10 +0.5 1,400,148 - B158DRAFT_1355 0.13 -0.4 1,400,214 - B158DRAFT_1355 0.28 -1.0 1,400,385 + B158DRAFT_1355 0.69 +1.9 1,400,388 - B158DRAFT_1355 0.70 -1.5 1,400,467 - B158DRAFT_1355 0.89 +0.3 1,400,533 + -0.1 1,400,582 + -0.4 1,400,582 + -0.5 1,400,583 - +0.5 1,400,590 - +0.9 1,400,590 - -1.0 1,400,590 - -1.5 1,400,590 - -0.5 1,400,590 - -2.2 1,400,652 - +0.6 1,400,667 - +0.6 1,400,670 + -0.3 1,400,747 + B158DRAFT_1356 0.22 -1.4 1,400,747 + B158DRAFT_1356 0.22 +0.1 1,400,822 - B158DRAFT_1356 0.35 +0.6 1,400,893 - B158DRAFT_1356 0.47 -0.9 1,400,942 - B158DRAFT_1356 0.55 -2.7 1,400,942 - B158DRAFT_1356 0.55 +1.3 1,401,001 - B158DRAFT_1356 0.65 -1.8 1,401,021 + B158DRAFT_1356 0.69 +0.0 1,401,102 - B158DRAFT_1356 0.82 -1.2 1,401,109 - B158DRAFT_1356 0.84 +0.3 1,401,172 - -0.9 1,401,181 + -0.2 1,401,201 - -0.9 1,401,250 + -1.9 1,401,258 - +0.1 1,401,385 + B158DRAFT_1357 0.15 -1.6 1,401,422 + B158DRAFT_1357 0.21 +0.6 1,401,430 + B158DRAFT_1357 0.23 -2.5 1,401,430 + B158DRAFT_1357 0.23 -1.7 1,401,450 + B158DRAFT_1357 0.26 +0.1 1,401,456 + B158DRAFT_1357 0.27 +0.0 1,401,458 - B158DRAFT_1357 0.27 +0.2 1,401,466 + B158DRAFT_1357 0.28 -1.2 1,401,529 - B158DRAFT_1357 0.38 +0.1 1,401,538 - B158DRAFT_1357 0.40 +1.8 1,401,553 - B158DRAFT_1357 0.42 -0.6 1,401,557 + B158DRAFT_1357 0.43 -3.1 1,401,567 + B158DRAFT_1357 0.44 +0.5 1,401,575 - B158DRAFT_1357 0.46 -0.4 1,401,575 - B158DRAFT_1357 0.46 -1.1 1,401,575 - B158DRAFT_1357 0.46 +0.5 1,401,576 + B158DRAFT_1357 0.46 -1.2 1,401,581 - B158DRAFT_1357 0.47 -1.4 1,401,584 - B158DRAFT_1357 0.47 -0.0 1,401,584 - B158DRAFT_1357 0.47 -0.3 1,401,739 - B158DRAFT_1357 0.72 +0.3 1,401,883 - -0.8 1,401,892 + -1.7 1,401,900 - +0.5 1,401,900 - -0.5 1,401,925 + +0.4 1,401,925 + -0.8 1,401,925 + -1.2 1,401,933 - -0.1 1,402,008 + -1.4 1,402,008 + +0.8 1,402,017 - +0.9 1,402,056 + +0.6 1,402,089 - -1.8 1,402,101 - +0.7 1,402,109 + -0.7 1,402,157 - B158DRAFT_1358 0.10 +2.2 1,402,170 + B158DRAFT_1358 0.11 +0.7 1,402,170 + B158DRAFT_1358 0.11 -0.3 1,402,178 - B158DRAFT_1358 0.11 +0.2 1,402,183 - B158DRAFT_1358 0.12 -0.5 1,402,183 - B158DRAFT_1358 0.12 -1.9 1,402,194 + B158DRAFT_1358 0.13 -1.1 1,402,202 - B158DRAFT_1358 0.13 -0.9
Or see this region's nucleotide sequence