Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1307

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1306 and B158DRAFT_1307 are separated by 9 nucleotidesB158DRAFT_1307 and B158DRAFT_1308 are separated by 97 nucleotides B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737 _1306 B158DRAFT_1307: B158DRAFT_1307 - GTP cyclohydrolase I, at 1,354,747 to 1,355,304 _1307 B158DRAFT_1308: B158DRAFT_1308 - 4-phosphoerythronate dehydrogenase (EC 1.1.1.290), at 1,355,402 to 1,356,487 _1308 Position (kb) 1354 1355 1356Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1353.816 kb on + strand, within B158DRAFT_1306at 1353.816 kb on + strand, within B158DRAFT_1306at 1353.830 kb on - strand, within B158DRAFT_1306at 1353.844 kb on + strand, within B158DRAFT_1306at 1353.864 kb on - strand, within B158DRAFT_1306at 1353.865 kb on + strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.898 kb on - strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.908 kb on - strand, within B158DRAFT_1306at 1353.959 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.206 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.262 kb on - strand, within B158DRAFT_1306at 1354.284 kb on + strand, within B158DRAFT_1306at 1354.292 kb on + strand, within B158DRAFT_1306at 1354.292 kb on + strand, within B158DRAFT_1306at 1354.300 kb on - strand, within B158DRAFT_1306at 1354.300 kb on - strand, within B158DRAFT_1306at 1354.326 kb on - strand, within B158DRAFT_1306at 1354.344 kb on + strand, within B158DRAFT_1306at 1354.370 kb on - strand, within B158DRAFT_1306at 1354.407 kb on + strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.431 kb on - strand, within B158DRAFT_1306at 1354.451 kb on + strand, within B158DRAFT_1306at 1354.464 kb on + strand, within B158DRAFT_1306at 1354.472 kb on - strand, within B158DRAFT_1306at 1354.640 kb on - strandat 1354.645 kb on + strandat 1354.653 kb on - strandat 1354.657 kb on + strandat 1354.672 kb on - strandat 1354.744 kb on + strandat 1355.325 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,353,816 + B158DRAFT_1306 0.51 -0.0
1,353,816 + B158DRAFT_1306 0.51 +1.2
1,353,830 - B158DRAFT_1306 0.52 +1.9
1,353,844 + B158DRAFT_1306 0.53 -0.4
1,353,864 - B158DRAFT_1306 0.54 +1.0
1,353,865 + B158DRAFT_1306 0.54 -0.8
1,353,873 - B158DRAFT_1306 0.54 +0.8
1,353,873 - B158DRAFT_1306 0.54 +4.3
1,353,873 - B158DRAFT_1306 0.54 -1.7
1,353,898 - B158DRAFT_1306 0.56 -0.9
1,353,900 + B158DRAFT_1306 0.56 -0.9
1,353,900 + B158DRAFT_1306 0.56 -2.2
1,353,900 + B158DRAFT_1306 0.56 -1.4
1,353,908 - B158DRAFT_1306 0.56 -1.2
1,353,959 + B158DRAFT_1306 0.59 +0.1
1,354,023 + B158DRAFT_1306 0.62 -0.3
1,354,023 + B158DRAFT_1306 0.62 +2.0
1,354,023 + B158DRAFT_1306 0.62 +3.5
1,354,206 + B158DRAFT_1306 0.72 +0.2
1,354,254 + B158DRAFT_1306 0.74 +0.1
1,354,254 + B158DRAFT_1306 0.74 +0.0
1,354,254 + B158DRAFT_1306 0.74 -0.2
1,354,254 + B158DRAFT_1306 0.74 -0.7
1,354,262 - B158DRAFT_1306 0.75 -1.3
1,354,284 + B158DRAFT_1306 0.76 -1.0
1,354,292 + B158DRAFT_1306 0.76 +2.5
1,354,292 + B158DRAFT_1306 0.76 +1.3
1,354,300 - B158DRAFT_1306 0.77 +0.2
1,354,300 - B158DRAFT_1306 0.77 +0.3
1,354,326 - B158DRAFT_1306 0.78 -2.1
1,354,344 + B158DRAFT_1306 0.79 +1.6
1,354,370 - B158DRAFT_1306 0.81 +0.8
1,354,407 + B158DRAFT_1306 0.83 -0.9
1,354,415 - B158DRAFT_1306 0.83 -1.4
1,354,415 - B158DRAFT_1306 0.83 +0.8
1,354,415 - B158DRAFT_1306 0.83 -0.9
1,354,415 - B158DRAFT_1306 0.83 -0.1
1,354,415 - B158DRAFT_1306 0.83 -1.2
1,354,415 - B158DRAFT_1306 0.83 -0.8
1,354,431 - B158DRAFT_1306 0.84 +0.7
1,354,451 + B158DRAFT_1306 0.85 +0.4
1,354,464 + B158DRAFT_1306 0.86 -0.4
1,354,472 - B158DRAFT_1306 0.86 -0.7
1,354,640 - -0.8
1,354,645 + -0.7
1,354,653 - +0.3
1,354,657 + -1.6
1,354,672 - +1.2
1,354,744 + -2.3
1,355,325 - -0.1

Or see this region's nucleotide sequence