Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1304

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1303 and B158DRAFT_1304 are separated by 77 nucleotidesB158DRAFT_1304 and B158DRAFT_1305 are separated by 300 nucleotides B158DRAFT_1303: B158DRAFT_1303 - Pirin-related protein, at 1,349,672 to 1,350,544 _1303 B158DRAFT_1304: B158DRAFT_1304 - hypothetical protein, at 1,350,622 to 1,351,671 _1304 B158DRAFT_1305: B158DRAFT_1305 - hypothetical protein, at 1,351,972 to 1,352,769 _1305 Position (kb) 1350 1351 1352Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1349.646 kb on + strandat 1349.653 kb on + strandat 1349.654 kb on - strandat 1349.654 kb on - strandat 1349.661 kb on - strandat 1349.661 kb on - strandat 1349.730 kb on + strandat 1349.738 kb on + strandat 1349.842 kb on - strand, within B158DRAFT_1303at 1349.888 kb on - strand, within B158DRAFT_1303at 1349.946 kb on + strand, within B158DRAFT_1303at 1349.946 kb on + strand, within B158DRAFT_1303at 1349.946 kb on + strand, within B158DRAFT_1303at 1349.949 kb on + strand, within B158DRAFT_1303at 1349.956 kb on + strand, within B158DRAFT_1303at 1349.956 kb on + strand, within B158DRAFT_1303at 1349.956 kb on - strand, within B158DRAFT_1303at 1349.956 kb on - strand, within B158DRAFT_1303at 1349.964 kb on - strand, within B158DRAFT_1303at 1349.964 kb on - strand, within B158DRAFT_1303at 1350.027 kb on - strand, within B158DRAFT_1303at 1350.036 kb on + strand, within B158DRAFT_1303at 1350.056 kb on - strand, within B158DRAFT_1303at 1350.075 kb on - strand, within B158DRAFT_1303at 1350.112 kb on + strand, within B158DRAFT_1303at 1350.146 kb on - strand, within B158DRAFT_1303at 1350.190 kb on + strand, within B158DRAFT_1303at 1350.252 kb on - strand, within B158DRAFT_1303at 1350.272 kb on - strand, within B158DRAFT_1303at 1350.338 kb on + strand, within B158DRAFT_1303at 1350.384 kb on - strand, within B158DRAFT_1303at 1350.403 kb on - strand, within B158DRAFT_1303at 1350.678 kb on - strandat 1350.687 kb on + strandat 1350.695 kb on - strandat 1350.695 kb on - strandat 1350.771 kb on + strand, within B158DRAFT_1304at 1350.771 kb on + strand, within B158DRAFT_1304at 1350.771 kb on + strand, within B158DRAFT_1304at 1350.771 kb on + strand, within B158DRAFT_1304at 1350.771 kb on + strand, within B158DRAFT_1304at 1350.779 kb on - strand, within B158DRAFT_1304at 1350.779 kb on - strand, within B158DRAFT_1304at 1350.779 kb on - strand, within B158DRAFT_1304at 1350.789 kb on - strand, within B158DRAFT_1304at 1350.819 kb on + strand, within B158DRAFT_1304at 1350.827 kb on - strand, within B158DRAFT_1304at 1350.849 kb on + strand, within B158DRAFT_1304at 1350.849 kb on + strand, within B158DRAFT_1304at 1350.889 kb on - strand, within B158DRAFT_1304at 1350.897 kb on - strand, within B158DRAFT_1304at 1350.938 kb on - strand, within B158DRAFT_1304at 1350.962 kb on + strand, within B158DRAFT_1304at 1350.970 kb on - strand, within B158DRAFT_1304at 1350.986 kb on + strand, within B158DRAFT_1304at 1350.987 kb on - strand, within B158DRAFT_1304at 1350.994 kb on - strand, within B158DRAFT_1304at 1350.994 kb on - strand, within B158DRAFT_1304at 1351.036 kb on - strand, within B158DRAFT_1304at 1351.038 kb on + strand, within B158DRAFT_1304at 1351.038 kb on + strand, within B158DRAFT_1304at 1351.041 kb on - strand, within B158DRAFT_1304at 1351.046 kb on - strand, within B158DRAFT_1304at 1351.052 kb on + strand, within B158DRAFT_1304at 1351.066 kb on - strand, within B158DRAFT_1304at 1351.075 kb on + strand, within B158DRAFT_1304at 1351.083 kb on - strand, within B158DRAFT_1304at 1351.098 kb on - strand, within B158DRAFT_1304at 1351.244 kb on - strand, within B158DRAFT_1304at 1351.361 kb on + strand, within B158DRAFT_1304at 1351.369 kb on - strand, within B158DRAFT_1304at 1351.369 kb on - strand, within B158DRAFT_1304at 1351.422 kb on + strand, within B158DRAFT_1304at 1351.464 kb on + strand, within B158DRAFT_1304at 1351.472 kb on - strand, within B158DRAFT_1304at 1351.477 kb on - strand, within B158DRAFT_1304at 1351.531 kb on - strand, within B158DRAFT_1304at 1351.566 kb on - strand, within B158DRAFT_1304at 1351.570 kb on + strandat 1351.570 kb on + strandat 1351.571 kb on - strandat 1351.578 kb on - strandat 1351.578 kb on - strandat 1351.578 kb on - strandat 1351.631 kb on - strandat 1351.688 kb on - strandat 1352.090 kb on + strand, within B158DRAFT_1305at 1352.231 kb on - strand, within B158DRAFT_1305at 1352.317 kb on - strand, within B158DRAFT_1305at 1352.332 kb on - strand, within B158DRAFT_1305at 1352.395 kb on + strand, within B158DRAFT_1305at 1352.514 kb on + strand, within B158DRAFT_1305at 1352.522 kb on - strand, within B158DRAFT_1305

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,349,646 + -0.2
1,349,653 + -0.2
1,349,654 - +0.8
1,349,654 - -1.8
1,349,661 - +0.1
1,349,661 - +0.3
1,349,730 + -1.8
1,349,738 + -1.5
1,349,842 - B158DRAFT_1303 0.19 -0.2
1,349,888 - B158DRAFT_1303 0.25 -1.2
1,349,946 + B158DRAFT_1303 0.31 +1.2
1,349,946 + B158DRAFT_1303 0.31 -0.3
1,349,946 + B158DRAFT_1303 0.31 -1.5
1,349,949 + B158DRAFT_1303 0.32 -0.4
1,349,956 + B158DRAFT_1303 0.33 +0.7
1,349,956 + B158DRAFT_1303 0.33 +0.1
1,349,956 - B158DRAFT_1303 0.33 -0.2
1,349,956 - B158DRAFT_1303 0.33 -0.6
1,349,964 - B158DRAFT_1303 0.33 +0.9
1,349,964 - B158DRAFT_1303 0.33 -0.3
1,350,027 - B158DRAFT_1303 0.41 +0.3
1,350,036 + B158DRAFT_1303 0.42 -0.0
1,350,056 - B158DRAFT_1303 0.44 +0.6
1,350,075 - B158DRAFT_1303 0.46 -0.3
1,350,112 + B158DRAFT_1303 0.50 -0.1
1,350,146 - B158DRAFT_1303 0.54 +0.4
1,350,190 + B158DRAFT_1303 0.59 +0.5
1,350,252 - B158DRAFT_1303 0.66 -0.6
1,350,272 - B158DRAFT_1303 0.69 -1.5
1,350,338 + B158DRAFT_1303 0.76 -0.9
1,350,384 - B158DRAFT_1303 0.82 -0.8
1,350,403 - B158DRAFT_1303 0.84 -0.3
1,350,678 - -2.3
1,350,687 + -1.2
1,350,695 - -1.0
1,350,695 - -2.5
1,350,771 + B158DRAFT_1304 0.14 -0.7
1,350,771 + B158DRAFT_1304 0.14 -0.5
1,350,771 + B158DRAFT_1304 0.14 -1.9
1,350,771 + B158DRAFT_1304 0.14 -1.0
1,350,771 + B158DRAFT_1304 0.14 -2.4
1,350,779 - B158DRAFT_1304 0.15 -2.0
1,350,779 - B158DRAFT_1304 0.15 -2.9
1,350,779 - B158DRAFT_1304 0.15 -1.1
1,350,789 - B158DRAFT_1304 0.16 +0.3
1,350,819 + B158DRAFT_1304 0.19 -0.8
1,350,827 - B158DRAFT_1304 0.20 -0.6
1,350,849 + B158DRAFT_1304 0.22 -2.3
1,350,849 + B158DRAFT_1304 0.22 -0.2
1,350,889 - B158DRAFT_1304 0.25 +1.8
1,350,897 - B158DRAFT_1304 0.26 -1.8
1,350,938 - B158DRAFT_1304 0.30 +0.3
1,350,962 + B158DRAFT_1304 0.32 -1.0
1,350,970 - B158DRAFT_1304 0.33 +0.7
1,350,986 + B158DRAFT_1304 0.35 +0.2
1,350,987 - B158DRAFT_1304 0.35 +1.3
1,350,994 - B158DRAFT_1304 0.35 -1.4
1,350,994 - B158DRAFT_1304 0.35 -1.1
1,351,036 - B158DRAFT_1304 0.39 -0.2
1,351,038 + B158DRAFT_1304 0.40 -0.2
1,351,038 + B158DRAFT_1304 0.40 -0.7
1,351,041 - B158DRAFT_1304 0.40 -0.3
1,351,046 - B158DRAFT_1304 0.40 +0.7
1,351,052 + B158DRAFT_1304 0.41 -0.6
1,351,066 - B158DRAFT_1304 0.42 -2.6
1,351,075 + B158DRAFT_1304 0.43 +0.2
1,351,083 - B158DRAFT_1304 0.44 +0.6
1,351,098 - B158DRAFT_1304 0.45 +0.2
1,351,244 - B158DRAFT_1304 0.59 +1.1
1,351,361 + B158DRAFT_1304 0.70 -2.5
1,351,369 - B158DRAFT_1304 0.71 -0.5
1,351,369 - B158DRAFT_1304 0.71 -0.9
1,351,422 + B158DRAFT_1304 0.76 +0.1
1,351,464 + B158DRAFT_1304 0.80 -0.0
1,351,472 - B158DRAFT_1304 0.81 -1.7
1,351,477 - B158DRAFT_1304 0.81 +1.3
1,351,531 - B158DRAFT_1304 0.87 -1.6
1,351,566 - B158DRAFT_1304 0.90 -0.5
1,351,570 + +0.3
1,351,570 + +0.6
1,351,571 - -0.4
1,351,578 - -1.0
1,351,578 - -1.9
1,351,578 - +1.2
1,351,631 - -1.5
1,351,688 - +0.4
1,352,090 + B158DRAFT_1305 0.15 -0.6
1,352,231 - B158DRAFT_1305 0.32 +0.6
1,352,317 - B158DRAFT_1305 0.43 -0.0
1,352,332 - B158DRAFT_1305 0.45 -0.8
1,352,395 + B158DRAFT_1305 0.53 -1.1
1,352,514 + B158DRAFT_1305 0.68 -1.1
1,352,522 - B158DRAFT_1305 0.69 -1.1

Or see this region's nucleotide sequence