Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1248 and B158DRAFT_1249 are separated by 148 nucleotides B158DRAFT_1249 and B158DRAFT_1250 are separated by 260 nucleotides
B158DRAFT_1248: B158DRAFT_1248 - cytochrome d oxidase, subunit II (cydB), at 1,288,303 to 1,289,319
_1248
B158DRAFT_1249: B158DRAFT_1249 - Lactoylglutathione lyase and related lyases, at 1,289,468 to 1,289,845
_1249
B158DRAFT_1250: B158DRAFT_1250 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 1,290,106 to 1,291,107
_1250
Position (kb)
1289
1290 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1288.468 kb on - strand, within B158DRAFT_1248 at 1288.508 kb on - strand, within B158DRAFT_1248 at 1288.518 kb on - strand, within B158DRAFT_1248 at 1288.527 kb on + strand, within B158DRAFT_1248 at 1288.536 kb on + strand, within B158DRAFT_1248 at 1288.536 kb on + strand, within B158DRAFT_1248 at 1288.558 kb on + strand, within B158DRAFT_1248 at 1288.607 kb on + strand, within B158DRAFT_1248 at 1288.647 kb on + strand, within B158DRAFT_1248 at 1288.655 kb on - strand, within B158DRAFT_1248 at 1288.660 kb on - strand, within B158DRAFT_1248 at 1288.691 kb on + strand, within B158DRAFT_1248 at 1288.696 kb on + strand, within B158DRAFT_1248 at 1288.721 kb on - strand, within B158DRAFT_1248 at 1288.728 kb on + strand, within B158DRAFT_1248 at 1288.728 kb on + strand, within B158DRAFT_1248 at 1288.728 kb on + strand, within B158DRAFT_1248 at 1288.728 kb on + strand, within B158DRAFT_1248 at 1288.728 kb on + strand, within B158DRAFT_1248 at 1288.730 kb on + strand, within B158DRAFT_1248 at 1288.736 kb on - strand, within B158DRAFT_1248 at 1288.736 kb on - strand, within B158DRAFT_1248 at 1289.042 kb on - strand, within B158DRAFT_1248 at 1289.042 kb on - strand, within B158DRAFT_1248 at 1289.042 kb on - strand, within B158DRAFT_1248 at 1289.073 kb on - strand, within B158DRAFT_1248 at 1289.136 kb on - strand, within B158DRAFT_1248 at 1289.162 kb on - strand, within B158DRAFT_1248 at 1289.162 kb on - strand, within B158DRAFT_1248 at 1289.186 kb on + strand, within B158DRAFT_1248 at 1289.242 kb on - strand at 1289.301 kb on + strand at 1289.323 kb on + strand at 1289.342 kb on + strand at 1289.350 kb on - strand at 1289.350 kb on - strand at 1289.387 kb on - strand at 1289.407 kb on - strand at 1289.412 kb on - strand at 1289.425 kb on + strand at 1289.702 kb on + strand, within B158DRAFT_1249 at 1289.702 kb on + strand, within B158DRAFT_1249 at 1289.782 kb on + strand, within B158DRAFT_1249 at 1289.796 kb on + strand, within B158DRAFT_1249 at 1289.806 kb on + strand, within B158DRAFT_1249 at 1289.812 kb on + strand at 1289.820 kb on - strand at 1289.820 kb on - strand at 1289.820 kb on - strand at 1289.820 kb on - strand at 1290.025 kb on + strand at 1290.039 kb on + strand at 1290.047 kb on - strand at 1290.065 kb on + strand at 1290.066 kb on - strand at 1290.109 kb on + strand at 1290.109 kb on + strand at 1290.109 kb on + strand at 1290.109 kb on + strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.117 kb on - strand at 1290.131 kb on + strand at 1290.182 kb on + strand at 1290.207 kb on - strand, within B158DRAFT_1250 at 1290.247 kb on + strand, within B158DRAFT_1250 at 1290.378 kb on - strand, within B158DRAFT_1250 at 1290.424 kb on - strand, within B158DRAFT_1250 at 1290.431 kb on + strand, within B158DRAFT_1250 at 1290.458 kb on + strand, within B158DRAFT_1250 at 1290.458 kb on + strand, within B158DRAFT_1250 at 1290.458 kb on + strand, within B158DRAFT_1250 at 1290.466 kb on - strand, within B158DRAFT_1250 at 1290.466 kb on - strand, within B158DRAFT_1250 at 1290.466 kb on - strand, within B158DRAFT_1250 at 1290.583 kb on + strand, within B158DRAFT_1250 at 1290.583 kb on + strand, within B158DRAFT_1250 at 1290.602 kb on + strand, within B158DRAFT_1250 at 1290.608 kb on + strand, within B158DRAFT_1250 at 1290.642 kb on - strand, within B158DRAFT_1250 at 1290.644 kb on + strand, within B158DRAFT_1250 at 1290.652 kb on - strand, within B158DRAFT_1250 at 1290.652 kb on - strand, within B158DRAFT_1250 at 1290.686 kb on + strand, within B158DRAFT_1250 at 1290.694 kb on - strand, within B158DRAFT_1250 at 1290.694 kb on - strand, within B158DRAFT_1250 at 1290.717 kb on + strand, within B158DRAFT_1250 at 1290.717 kb on + strand, within B158DRAFT_1250 at 1290.725 kb on - strand, within B158DRAFT_1250 at 1290.735 kb on + strand, within B158DRAFT_1250 at 1290.743 kb on - strand, within B158DRAFT_1250 at 1290.743 kb on - strand, within B158DRAFT_1250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,288,468 - B158DRAFT_1248 0.16 -2.1 1,288,508 - B158DRAFT_1248 0.20 -1.5 1,288,518 - B158DRAFT_1248 0.21 -0.1 1,288,527 + B158DRAFT_1248 0.22 +0.7 1,288,536 + B158DRAFT_1248 0.23 +0.6 1,288,536 + B158DRAFT_1248 0.23 -0.4 1,288,558 + B158DRAFT_1248 0.25 +0.4 1,288,607 + B158DRAFT_1248 0.30 -0.0 1,288,647 + B158DRAFT_1248 0.34 +0.6 1,288,655 - B158DRAFT_1248 0.35 +0.4 1,288,660 - B158DRAFT_1248 0.35 +1.0 1,288,691 + B158DRAFT_1248 0.38 -0.4 1,288,696 + B158DRAFT_1248 0.39 -1.1 1,288,721 - B158DRAFT_1248 0.41 +0.5 1,288,728 + B158DRAFT_1248 0.42 -0.3 1,288,728 + B158DRAFT_1248 0.42 +0.4 1,288,728 + B158DRAFT_1248 0.42 -0.1 1,288,728 + B158DRAFT_1248 0.42 -0.8 1,288,728 + B158DRAFT_1248 0.42 +0.4 1,288,730 + B158DRAFT_1248 0.42 -0.3 1,288,736 - B158DRAFT_1248 0.43 -1.3 1,288,736 - B158DRAFT_1248 0.43 -0.7 1,289,042 - B158DRAFT_1248 0.73 -0.2 1,289,042 - B158DRAFT_1248 0.73 +0.4 1,289,042 - B158DRAFT_1248 0.73 -1.7 1,289,073 - B158DRAFT_1248 0.76 +1.8 1,289,136 - B158DRAFT_1248 0.82 -0.8 1,289,162 - B158DRAFT_1248 0.84 -0.6 1,289,162 - B158DRAFT_1248 0.84 +1.0 1,289,186 + B158DRAFT_1248 0.87 +0.1 1,289,242 - +0.1 1,289,301 + -1.1 1,289,323 + -0.8 1,289,342 + -1.0 1,289,350 - -0.8 1,289,350 - +0.3 1,289,387 - -0.1 1,289,407 - -0.7 1,289,412 - +0.2 1,289,425 + -1.4 1,289,702 + B158DRAFT_1249 0.62 +1.4 1,289,702 + B158DRAFT_1249 0.62 -1.2 1,289,782 + B158DRAFT_1249 0.83 -0.5 1,289,796 + B158DRAFT_1249 0.87 -2.1 1,289,806 + B158DRAFT_1249 0.89 +0.8 1,289,812 + +0.2 1,289,820 - -0.1 1,289,820 - -1.2 1,289,820 - -1.8 1,289,820 - -1.2 1,290,025 + -0.8 1,290,039 + -0.4 1,290,047 - +0.6 1,290,065 + -0.9 1,290,066 - -0.7 1,290,109 + -0.6 1,290,109 + +1.2 1,290,109 + +0.1 1,290,109 + -0.1 1,290,117 - -0.6 1,290,117 - -1.5 1,290,117 - +1.4 1,290,117 - +0.3 1,290,117 - +0.9 1,290,117 - +1.3 1,290,117 - +1.2 1,290,117 - -1.2 1,290,131 + +0.2 1,290,182 + +0.2 1,290,207 - B158DRAFT_1250 0.10 +1.8 1,290,247 + B158DRAFT_1250 0.14 -0.8 1,290,378 - B158DRAFT_1250 0.27 -2.0 1,290,424 - B158DRAFT_1250 0.32 +0.7 1,290,431 + B158DRAFT_1250 0.32 -0.8 1,290,458 + B158DRAFT_1250 0.35 +0.0 1,290,458 + B158DRAFT_1250 0.35 -0.1 1,290,458 + B158DRAFT_1250 0.35 -0.1 1,290,466 - B158DRAFT_1250 0.36 +1.4 1,290,466 - B158DRAFT_1250 0.36 -0.9 1,290,466 - B158DRAFT_1250 0.36 -1.0 1,290,583 + B158DRAFT_1250 0.48 -1.0 1,290,583 + B158DRAFT_1250 0.48 +0.2 1,290,602 + B158DRAFT_1250 0.50 -1.6 1,290,608 + B158DRAFT_1250 0.50 -1.6 1,290,642 - B158DRAFT_1250 0.53 +0.9 1,290,644 + B158DRAFT_1250 0.54 -1.0 1,290,652 - B158DRAFT_1250 0.54 -2.5 1,290,652 - B158DRAFT_1250 0.54 +0.3 1,290,686 + B158DRAFT_1250 0.58 +0.6 1,290,694 - B158DRAFT_1250 0.59 +0.4 1,290,694 - B158DRAFT_1250 0.59 -1.7 1,290,717 + B158DRAFT_1250 0.61 -1.4 1,290,717 + B158DRAFT_1250 0.61 +0.3 1,290,725 - B158DRAFT_1250 0.62 -0.2 1,290,735 + B158DRAFT_1250 0.63 -0.8 1,290,743 - B158DRAFT_1250 0.64 -1.4 1,290,743 - B158DRAFT_1250 0.64 +0.6
Or see this region's nucleotide sequence