Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1245

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1244 and B158DRAFT_1245 are separated by 90 nucleotidesB158DRAFT_1245 and B158DRAFT_1246 are separated by 106 nucleotidesB158DRAFT_1246 and B158DRAFT_1247 are separated by 189 nucleotides B158DRAFT_1244: B158DRAFT_1244 - Rhombo-CTERM domain, at 1,279,645 to 1,284,237 _1244 B158DRAFT_1245: B158DRAFT_1245 - Outer membrane cobalamin receptor protein, at 1,284,328 to 1,286,283 _1245 B158DRAFT_1246: B158DRAFT_1246 - hypothetical protein, at 1,286,390 to 1,286,695 _1246 B158DRAFT_1247: B158DRAFT_1247 - cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10), at 1,286,885 to 1,288,306 _1247 Position (kb) 1284 1285 1286 1287Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1283.332 kb on + strand, within B158DRAFT_1244at 1283.332 kb on + strand, within B158DRAFT_1244at 1283.332 kb on + strand, within B158DRAFT_1244at 1283.340 kb on - strand, within B158DRAFT_1244at 1283.397 kb on - strand, within B158DRAFT_1244at 1283.438 kb on - strand, within B158DRAFT_1244at 1283.538 kb on - strand, within B158DRAFT_1244at 1283.538 kb on - strand, within B158DRAFT_1244at 1283.538 kb on - strand, within B158DRAFT_1244at 1283.556 kb on + strand, within B158DRAFT_1244at 1283.586 kb on - strand, within B158DRAFT_1244at 1283.594 kb on + strand, within B158DRAFT_1244at 1283.598 kb on + strand, within B158DRAFT_1244at 1283.648 kb on - strand, within B158DRAFT_1244at 1283.672 kb on + strand, within B158DRAFT_1244at 1283.710 kb on + strand, within B158DRAFT_1244at 1283.812 kb on + strandat 1283.984 kb on + strandat 1284.026 kb on - strandat 1284.102 kb on + strandat 1284.107 kb on + strandat 1284.115 kb on + strandat 1284.313 kb on - strandat 1284.313 kb on - strandat 1284.366 kb on - strandat 1284.403 kb on + strandat 1284.405 kb on + strandat 1284.413 kb on - strandat 1284.494 kb on + strandat 1284.518 kb on + strandat 1284.563 kb on + strand, within B158DRAFT_1245at 1284.595 kb on + strand, within B158DRAFT_1245at 1284.603 kb on - strand, within B158DRAFT_1245at 1284.611 kb on - strand, within B158DRAFT_1245at 1284.623 kb on - strand, within B158DRAFT_1245at 1284.690 kb on - strand, within B158DRAFT_1245at 1284.691 kb on + strand, within B158DRAFT_1245at 1284.802 kb on + strand, within B158DRAFT_1245at 1284.835 kb on - strand, within B158DRAFT_1245at 1284.868 kb on - strand, within B158DRAFT_1245at 1284.868 kb on - strand, within B158DRAFT_1245at 1285.028 kb on - strand, within B158DRAFT_1245at 1285.045 kb on - strand, within B158DRAFT_1245at 1285.045 kb on - strand, within B158DRAFT_1245at 1285.081 kb on + strand, within B158DRAFT_1245at 1285.081 kb on + strand, within B158DRAFT_1245at 1285.089 kb on - strand, within B158DRAFT_1245at 1285.115 kb on + strand, within B158DRAFT_1245at 1285.118 kb on + strand, within B158DRAFT_1245at 1285.170 kb on - strand, within B158DRAFT_1245at 1285.258 kb on - strand, within B158DRAFT_1245at 1285.339 kb on - strand, within B158DRAFT_1245at 1285.340 kb on - strand, within B158DRAFT_1245at 1285.349 kb on + strand, within B158DRAFT_1245at 1285.413 kb on - strand, within B158DRAFT_1245at 1285.427 kb on + strand, within B158DRAFT_1245at 1285.434 kb on - strand, within B158DRAFT_1245at 1285.474 kb on + strand, within B158DRAFT_1245at 1285.474 kb on + strand, within B158DRAFT_1245at 1285.474 kb on + strand, within B158DRAFT_1245at 1285.482 kb on - strand, within B158DRAFT_1245at 1285.482 kb on - strand, within B158DRAFT_1245at 1285.482 kb on - strand, within B158DRAFT_1245at 1285.482 kb on - strand, within B158DRAFT_1245at 1285.509 kb on + strand, within B158DRAFT_1245at 1285.509 kb on + strand, within B158DRAFT_1245at 1285.517 kb on - strand, within B158DRAFT_1245at 1285.635 kb on + strand, within B158DRAFT_1245at 1285.636 kb on - strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.638 kb on + strand, within B158DRAFT_1245at 1285.640 kb on + strand, within B158DRAFT_1245at 1285.646 kb on - strand, within B158DRAFT_1245at 1285.648 kb on - strand, within B158DRAFT_1245at 1285.653 kb on - strand, within B158DRAFT_1245at 1285.693 kb on + strand, within B158DRAFT_1245at 1285.723 kb on - strand, within B158DRAFT_1245at 1285.745 kb on + strand, within B158DRAFT_1245at 1285.745 kb on + strand, within B158DRAFT_1245at 1285.745 kb on + strand, within B158DRAFT_1245at 1285.745 kb on + strand, within B158DRAFT_1245at 1285.752 kb on + strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.753 kb on - strand, within B158DRAFT_1245at 1285.832 kb on + strand, within B158DRAFT_1245at 1285.840 kb on - strand, within B158DRAFT_1245at 1285.842 kb on + strand, within B158DRAFT_1245at 1285.842 kb on - strand, within B158DRAFT_1245at 1285.842 kb on - strand, within B158DRAFT_1245at 1285.844 kb on + strand, within B158DRAFT_1245at 1285.850 kb on - strand, within B158DRAFT_1245at 1285.850 kb on - strand, within B158DRAFT_1245at 1285.850 kb on - strand, within B158DRAFT_1245at 1285.892 kb on + strand, within B158DRAFT_1245at 1285.892 kb on - strand, within B158DRAFT_1245at 1285.892 kb on - strand, within B158DRAFT_1245at 1285.956 kb on + strand, within B158DRAFT_1245at 1285.956 kb on + strand, within B158DRAFT_1245at 1285.963 kb on - strand, within B158DRAFT_1245at 1285.964 kb on - strand, within B158DRAFT_1245at 1285.964 kb on - strand, within B158DRAFT_1245at 1285.987 kb on - strand, within B158DRAFT_1245at 1285.987 kb on - strand, within B158DRAFT_1245at 1286.062 kb on + strand, within B158DRAFT_1245at 1286.062 kb on + strand, within B158DRAFT_1245at 1286.070 kb on - strand, within B158DRAFT_1245at 1286.126 kb on - strandat 1286.328 kb on - strandat 1286.338 kb on + strandat 1286.345 kb on + strandat 1286.345 kb on + strandat 1286.347 kb on - strandat 1286.372 kb on - strandat 1286.380 kb on - strandat 1286.409 kb on + strandat 1286.419 kb on + strandat 1286.425 kb on - strand, within B158DRAFT_1246at 1286.427 kb on - strand, within B158DRAFT_1246at 1286.427 kb on - strand, within B158DRAFT_1246at 1286.435 kb on - strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.579 kb on + strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.598 kb on + strand, within B158DRAFT_1246at 1286.653 kb on + strand, within B158DRAFT_1246at 1286.679 kb on + strandat 1286.684 kb on + strandat 1286.687 kb on - strandat 1286.711 kb on + strandat 1286.802 kb on + strandat 1286.811 kb on + strandat 1286.811 kb on + strandat 1286.812 kb on - strandat 1286.816 kb on + strandat 1286.817 kb on - strandat 1286.817 kb on - strandat 1286.817 kb on - strandat 1286.834 kb on - strandat 1286.901 kb on - strandat 1286.906 kb on - strandat 1287.026 kb on + strandat 1287.161 kb on + strand, within B158DRAFT_1247at 1287.161 kb on + strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.179 kb on - strand, within B158DRAFT_1247at 1287.225 kb on + strand, within B158DRAFT_1247at 1287.227 kb on + strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.268 kb on - strand, within B158DRAFT_1247

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,283,332 + B158DRAFT_1244 0.80 -1.5
1,283,332 + B158DRAFT_1244 0.80 -0.2
1,283,332 + B158DRAFT_1244 0.80 +0.5
1,283,340 - B158DRAFT_1244 0.80 -0.4
1,283,397 - B158DRAFT_1244 0.82 -0.7
1,283,438 - B158DRAFT_1244 0.83 -0.5
1,283,538 - B158DRAFT_1244 0.85 -1.9
1,283,538 - B158DRAFT_1244 0.85 -1.0
1,283,538 - B158DRAFT_1244 0.85 -0.6
1,283,556 + B158DRAFT_1244 0.85 +0.3
1,283,586 - B158DRAFT_1244 0.86 +0.6
1,283,594 + B158DRAFT_1244 0.86 +1.2
1,283,598 + B158DRAFT_1244 0.86 +1.5
1,283,648 - B158DRAFT_1244 0.87 -1.5
1,283,672 + B158DRAFT_1244 0.88 +1.2
1,283,710 + B158DRAFT_1244 0.89 -1.3
1,283,812 + -1.7
1,283,984 + -0.5
1,284,026 - +0.6
1,284,102 + +1.1
1,284,107 + +1.6
1,284,115 + -0.6
1,284,313 - +0.1
1,284,313 - -0.6
1,284,366 - -0.0
1,284,403 + -1.7
1,284,405 + +0.3
1,284,413 - -0.4
1,284,494 + +2.9
1,284,518 + -1.6
1,284,563 + B158DRAFT_1245 0.12 +0.5
1,284,595 + B158DRAFT_1245 0.14 -1.3
1,284,603 - B158DRAFT_1245 0.14 -0.3
1,284,611 - B158DRAFT_1245 0.14 -1.4
1,284,623 - B158DRAFT_1245 0.15 +0.1
1,284,690 - B158DRAFT_1245 0.19 -0.8
1,284,691 + B158DRAFT_1245 0.19 -0.3
1,284,802 + B158DRAFT_1245 0.24 -1.0
1,284,835 - B158DRAFT_1245 0.26 +0.1
1,284,868 - B158DRAFT_1245 0.28 -0.5
1,284,868 - B158DRAFT_1245 0.28 +2.1
1,285,028 - B158DRAFT_1245 0.36 -1.0
1,285,045 - B158DRAFT_1245 0.37 -0.3
1,285,045 - B158DRAFT_1245 0.37 -0.7
1,285,081 + B158DRAFT_1245 0.38 -1.0
1,285,081 + B158DRAFT_1245 0.38 -2.3
1,285,089 - B158DRAFT_1245 0.39 -0.6
1,285,115 + B158DRAFT_1245 0.40 -0.6
1,285,118 + B158DRAFT_1245 0.40 -1.0
1,285,170 - B158DRAFT_1245 0.43 +0.5
1,285,258 - B158DRAFT_1245 0.48 -1.0
1,285,339 - B158DRAFT_1245 0.52 -1.2
1,285,340 - B158DRAFT_1245 0.52 +0.3
1,285,349 + B158DRAFT_1245 0.52 -1.4
1,285,413 - B158DRAFT_1245 0.55 -1.0
1,285,427 + B158DRAFT_1245 0.56 +0.7
1,285,434 - B158DRAFT_1245 0.57 -2.0
1,285,474 + B158DRAFT_1245 0.59 -0.5
1,285,474 + B158DRAFT_1245 0.59 +0.7
1,285,474 + B158DRAFT_1245 0.59 -1.7
1,285,482 - B158DRAFT_1245 0.59 -1.6
1,285,482 - B158DRAFT_1245 0.59 +0.9
1,285,482 - B158DRAFT_1245 0.59 +0.9
1,285,482 - B158DRAFT_1245 0.59 +0.7
1,285,509 + B158DRAFT_1245 0.60 -0.5
1,285,509 + B158DRAFT_1245 0.60 -1.0
1,285,517 - B158DRAFT_1245 0.61 -2.0
1,285,635 + B158DRAFT_1245 0.67 -0.1
1,285,636 - B158DRAFT_1245 0.67 -0.8
1,285,638 + B158DRAFT_1245 0.67 -0.8
1,285,638 + B158DRAFT_1245 0.67 +0.0
1,285,638 + B158DRAFT_1245 0.67 -0.8
1,285,638 + B158DRAFT_1245 0.67 -0.2
1,285,638 + B158DRAFT_1245 0.67 -1.3
1,285,638 + B158DRAFT_1245 0.67 -0.4
1,285,638 + B158DRAFT_1245 0.67 -0.7
1,285,638 + B158DRAFT_1245 0.67 +0.8
1,285,640 + B158DRAFT_1245 0.67 -0.5
1,285,646 - B158DRAFT_1245 0.67 -1.6
1,285,648 - B158DRAFT_1245 0.67 +1.1
1,285,653 - B158DRAFT_1245 0.68 +0.1
1,285,693 + B158DRAFT_1245 0.70 -0.9
1,285,723 - B158DRAFT_1245 0.71 -2.2
1,285,745 + B158DRAFT_1245 0.72 +1.6
1,285,745 + B158DRAFT_1245 0.72 +1.1
1,285,745 + B158DRAFT_1245 0.72 +1.6
1,285,745 + B158DRAFT_1245 0.72 -0.1
1,285,752 + B158DRAFT_1245 0.73 -0.7
1,285,753 - B158DRAFT_1245 0.73 +1.8
1,285,753 - B158DRAFT_1245 0.73 -1.1
1,285,753 - B158DRAFT_1245 0.73 -1.2
1,285,753 - B158DRAFT_1245 0.73 +0.7
1,285,753 - B158DRAFT_1245 0.73 -0.5
1,285,753 - B158DRAFT_1245 0.73 +0.1
1,285,753 - B158DRAFT_1245 0.73 -0.2
1,285,753 - B158DRAFT_1245 0.73 +0.8
1,285,832 + B158DRAFT_1245 0.77 -2.1
1,285,840 - B158DRAFT_1245 0.77 -0.9
1,285,842 + B158DRAFT_1245 0.77 +2.0
1,285,842 - B158DRAFT_1245 0.77 +0.5
1,285,842 - B158DRAFT_1245 0.77 +0.2
1,285,844 + B158DRAFT_1245 0.78 +0.4
1,285,850 - B158DRAFT_1245 0.78 -0.2
1,285,850 - B158DRAFT_1245 0.78 -0.4
1,285,850 - B158DRAFT_1245 0.78 -0.9
1,285,892 + B158DRAFT_1245 0.80 +0.5
1,285,892 - B158DRAFT_1245 0.80 -2.2
1,285,892 - B158DRAFT_1245 0.80 -0.9
1,285,956 + B158DRAFT_1245 0.83 +0.9
1,285,956 + B158DRAFT_1245 0.83 +1.0
1,285,963 - B158DRAFT_1245 0.84 -0.6
1,285,964 - B158DRAFT_1245 0.84 -0.3
1,285,964 - B158DRAFT_1245 0.84 +1.2
1,285,987 - B158DRAFT_1245 0.85 -1.5
1,285,987 - B158DRAFT_1245 0.85 -0.9
1,286,062 + B158DRAFT_1245 0.89 +1.5
1,286,062 + B158DRAFT_1245 0.89 -2.4
1,286,070 - B158DRAFT_1245 0.89 -0.9
1,286,126 - +0.9
1,286,328 - -0.9
1,286,338 + -2.1
1,286,345 + -2.4
1,286,345 + -0.3
1,286,347 - -0.0
1,286,372 - -0.8
1,286,380 - -0.2
1,286,409 + +0.4
1,286,419 + -0.6
1,286,425 - B158DRAFT_1246 0.11 +0.7
1,286,427 - B158DRAFT_1246 0.12 -0.6
1,286,427 - B158DRAFT_1246 0.12 -0.4
1,286,435 - B158DRAFT_1246 0.15 -1.9
1,286,578 + B158DRAFT_1246 0.61 -1.1
1,286,578 + B158DRAFT_1246 0.61 -1.5
1,286,578 + B158DRAFT_1246 0.61 +0.8
1,286,578 + B158DRAFT_1246 0.61 -0.6
1,286,578 + B158DRAFT_1246 0.61 -1.1
1,286,578 + B158DRAFT_1246 0.61 -0.3
1,286,578 + B158DRAFT_1246 0.61 -0.2
1,286,578 + B158DRAFT_1246 0.61 +1.5
1,286,578 + B158DRAFT_1246 0.61 -0.1
1,286,578 + B158DRAFT_1246 0.61 +1.7
1,286,578 + B158DRAFT_1246 0.61 -1.9
1,286,578 + B158DRAFT_1246 0.61 +0.2
1,286,578 + B158DRAFT_1246 0.61 +1.3
1,286,579 + B158DRAFT_1246 0.62 +0.0
1,286,586 - B158DRAFT_1246 0.64 +0.5
1,286,586 - B158DRAFT_1246 0.64 +0.3
1,286,586 - B158DRAFT_1246 0.64 -1.2
1,286,586 - B158DRAFT_1246 0.64 -1.8
1,286,586 - B158DRAFT_1246 0.64 +0.2
1,286,586 - B158DRAFT_1246 0.64 -0.5
1,286,586 - B158DRAFT_1246 0.64 +2.2
1,286,586 - B158DRAFT_1246 0.64 +1.1
1,286,586 - B158DRAFT_1246 0.64 -0.5
1,286,586 - B158DRAFT_1246 0.64 -0.6
1,286,586 - B158DRAFT_1246 0.64 +0.2
1,286,586 - B158DRAFT_1246 0.64 -0.1
1,286,586 - B158DRAFT_1246 0.64 -0.2
1,286,586 - B158DRAFT_1246 0.64 +2.0
1,286,586 - B158DRAFT_1246 0.64 -0.3
1,286,586 - B158DRAFT_1246 0.64 -1.1
1,286,586 - B158DRAFT_1246 0.64 -1.0
1,286,586 - B158DRAFT_1246 0.64 -2.2
1,286,586 - B158DRAFT_1246 0.64 +0.8
1,286,586 - B158DRAFT_1246 0.64 -0.4
1,286,598 + B158DRAFT_1246 0.68 +0.5
1,286,653 + B158DRAFT_1246 0.86 -0.6
1,286,679 + -0.3
1,286,684 + -1.1
1,286,687 - -1.7
1,286,711 + +0.5
1,286,802 + -0.5
1,286,811 + -0.3
1,286,811 + -1.1
1,286,812 - -1.4
1,286,816 + -0.2
1,286,817 - +1.5
1,286,817 - -0.7
1,286,817 - -1.1
1,286,834 - -1.2
1,286,901 - -1.0
1,286,906 - -1.2
1,287,026 + -1.0
1,287,161 + B158DRAFT_1247 0.19 -1.1
1,287,161 + B158DRAFT_1247 0.19 -0.7
1,287,169 - B158DRAFT_1247 0.20 +1.5
1,287,169 - B158DRAFT_1247 0.20 -1.4
1,287,169 - B158DRAFT_1247 0.20 -0.2
1,287,169 - B158DRAFT_1247 0.20 -0.1
1,287,179 - B158DRAFT_1247 0.21 -0.9
1,287,225 + B158DRAFT_1247 0.24 +1.5
1,287,227 + B158DRAFT_1247 0.24 -0.5
1,287,233 - B158DRAFT_1247 0.24 +4.0
1,287,233 - B158DRAFT_1247 0.24 +0.7
1,287,233 - B158DRAFT_1247 0.24 -0.2
1,287,268 - B158DRAFT_1247 0.27 -0.4

Or see this region's nucleotide sequence