Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1173 and B158DRAFT_1174 are separated by 3 nucleotides B158DRAFT_1174 and B158DRAFT_1175 are separated by 86 nucleotides B158DRAFT_1175 and B158DRAFT_1176 are separated by 429 nucleotides B158DRAFT_1176 and B158DRAFT_1177 are separated by 10 nucleotides
B158DRAFT_1173: B158DRAFT_1173 - hypothetical protein, at 1,213,925 to 1,214,395
_1173
B158DRAFT_1174: B158DRAFT_1174 - Predicted transcriptional regulators, at 1,214,399 to 1,214,623
_1174
B158DRAFT_1175: B158DRAFT_1175 - tRNA_Leu_CAA, at 1,214,710 to 1,214,796
_1175
B158DRAFT_1176: B158DRAFT_1176 - hypothetical protein, at 1,215,226 to 1,216,104
_1176
B158DRAFT_1177: B158DRAFT_1177 - hypothetical protein, at 1,216,115 to 1,217,236
_1177
Position (kb)
1215
1216
1217 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1214.287 kb on + strand, within B158DRAFT_1173 at 1214.295 kb on - strand, within B158DRAFT_1173 at 1214.296 kb on + strand, within B158DRAFT_1173 at 1214.296 kb on + strand, within B158DRAFT_1173 at 1214.301 kb on + strand, within B158DRAFT_1173 at 1214.309 kb on - strand, within B158DRAFT_1173 at 1214.389 kb on + strand at 1214.389 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.402 kb on - strand at 1214.438 kb on + strand, within B158DRAFT_1174 at 1214.521 kb on + strand, within B158DRAFT_1174 at 1214.563 kb on + strand, within B158DRAFT_1174 at 1214.563 kb on + strand, within B158DRAFT_1174 at 1214.571 kb on - strand, within B158DRAFT_1174 at 1214.585 kb on + strand, within B158DRAFT_1174 at 1214.593 kb on - strand, within B158DRAFT_1174 at 1214.627 kb on + strand at 1214.635 kb on - strand at 1214.635 kb on - strand at 1214.906 kb on + strand at 1214.914 kb on - strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1215.281 kb on - strand at 1215.297 kb on + strand at 1215.343 kb on - strand, within B158DRAFT_1176 at 1215.343 kb on - strand, within B158DRAFT_1176 at 1215.348 kb on - strand, within B158DRAFT_1176 at 1215.356 kb on + strand, within B158DRAFT_1176 at 1215.384 kb on - strand, within B158DRAFT_1176 at 1215.397 kb on + strand, within B158DRAFT_1176 at 1215.405 kb on - strand, within B158DRAFT_1176 at 1215.422 kb on + strand, within B158DRAFT_1176 at 1215.422 kb on + strand, within B158DRAFT_1176 at 1215.430 kb on - strand, within B158DRAFT_1176 at 1215.475 kb on - strand, within B158DRAFT_1176 at 1215.480 kb on - strand, within B158DRAFT_1176 at 1215.498 kb on - strand, within B158DRAFT_1176 at 1215.521 kb on + strand, within B158DRAFT_1176 at 1215.526 kb on + strand, within B158DRAFT_1176 at 1215.534 kb on - strand, within B158DRAFT_1176 at 1215.543 kb on - strand, within B158DRAFT_1176 at 1215.557 kb on + strand, within B158DRAFT_1176 at 1215.589 kb on - strand, within B158DRAFT_1176 at 1215.600 kb on - strand, within B158DRAFT_1176 at 1215.600 kb on - strand, within B158DRAFT_1176 at 1215.637 kb on - strand, within B158DRAFT_1176 at 1215.662 kb on + strand, within B158DRAFT_1176 at 1215.668 kb on - strand, within B158DRAFT_1176 at 1215.675 kb on + strand, within B158DRAFT_1176 at 1215.675 kb on + strand, within B158DRAFT_1176 at 1215.692 kb on + strand, within B158DRAFT_1176 at 1215.709 kb on - strand, within B158DRAFT_1176 at 1215.815 kb on + strand, within B158DRAFT_1176 at 1215.823 kb on - strand, within B158DRAFT_1176 at 1215.833 kb on - strand, within B158DRAFT_1176 at 1215.958 kb on - strand, within B158DRAFT_1176 at 1215.958 kb on - strand, within B158DRAFT_1176 at 1215.983 kb on + strand, within B158DRAFT_1176 at 1215.991 kb on - strand, within B158DRAFT_1176 at 1215.991 kb on - strand, within B158DRAFT_1176 at 1215.991 kb on - strand, within B158DRAFT_1176 at 1215.997 kb on + strand, within B158DRAFT_1176 at 1215.997 kb on + strand, within B158DRAFT_1176 at 1216.022 kb on - strand at 1216.048 kb on + strand at 1216.051 kb on - strand at 1216.106 kb on - strand at 1216.164 kb on + strand at 1216.225 kb on - strand at 1216.259 kb on + strand, within B158DRAFT_1177 at 1216.266 kb on + strand, within B158DRAFT_1177 at 1216.266 kb on + strand, within B158DRAFT_1177 at 1216.267 kb on - strand, within B158DRAFT_1177 at 1216.267 kb on - strand, within B158DRAFT_1177 at 1216.278 kb on + strand, within B158DRAFT_1177 at 1216.286 kb on - strand, within B158DRAFT_1177 at 1216.315 kb on + strand, within B158DRAFT_1177 at 1216.321 kb on + strand, within B158DRAFT_1177 at 1216.324 kb on - strand, within B158DRAFT_1177 at 1216.329 kb on - strand, within B158DRAFT_1177 at 1216.334 kb on - strand, within B158DRAFT_1177 at 1216.447 kb on - strand, within B158DRAFT_1177 at 1216.472 kb on - strand, within B158DRAFT_1177 at 1216.531 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.668 kb on + strand, within B158DRAFT_1177 at 1216.702 kb on - strand, within B158DRAFT_1177 at 1216.741 kb on + strand, within B158DRAFT_1177 at 1216.764 kb on - strand, within B158DRAFT_1177 at 1216.798 kb on + strand, within B158DRAFT_1177 at 1216.842 kb on - strand, within B158DRAFT_1177 at 1216.876 kb on + strand, within B158DRAFT_1177 at 1216.981 kb on + strand, within B158DRAFT_1177 at 1216.994 kb on + strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.044 kb on + strand, within B158DRAFT_1177 at 1217.061 kb on - strand, within B158DRAFT_1177 at 1217.082 kb on + strand, within B158DRAFT_1177
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,214,287 + B158DRAFT_1173 0.77 -0.2 1,214,295 - B158DRAFT_1173 0.79 -1.0 1,214,296 + B158DRAFT_1173 0.79 +0.4 1,214,296 + B158DRAFT_1173 0.79 +0.1 1,214,301 + B158DRAFT_1173 0.80 +0.4 1,214,309 - B158DRAFT_1173 0.82 -0.0 1,214,389 + -0.2 1,214,389 + +0.6 1,214,394 + +1.0 1,214,394 + +1.1 1,214,394 + -1.3 1,214,394 + +2.5 1,214,394 + -1.7 1,214,394 + -0.7 1,214,394 + -0.5 1,214,402 - -0.1 1,214,438 + B158DRAFT_1174 0.17 -0.6 1,214,521 + B158DRAFT_1174 0.54 -0.7 1,214,563 + B158DRAFT_1174 0.73 -1.2 1,214,563 + B158DRAFT_1174 0.73 -0.8 1,214,571 - B158DRAFT_1174 0.76 -1.2 1,214,585 + B158DRAFT_1174 0.83 -0.1 1,214,593 - B158DRAFT_1174 0.86 -1.8 1,214,627 + -0.6 1,214,635 - -1.8 1,214,635 - -0.5 1,214,906 + -2.3 1,214,914 - -1.9 1,214,916 + -1.3 1,214,916 + +1.2 1,214,916 + -1.7 1,214,916 + -1.3 1,214,916 + -0.1 1,214,924 - -2.5 1,214,924 - -0.7 1,214,924 - -1.6 1,214,924 - -0.9 1,215,281 - -1.8 1,215,297 + -1.1 1,215,343 - B158DRAFT_1176 0.13 -0.4 1,215,343 - B158DRAFT_1176 0.13 -1.4 1,215,348 - B158DRAFT_1176 0.14 +0.3 1,215,356 + B158DRAFT_1176 0.15 -0.0 1,215,384 - B158DRAFT_1176 0.18 -1.8 1,215,397 + B158DRAFT_1176 0.19 -0.4 1,215,405 - B158DRAFT_1176 0.20 -0.5 1,215,422 + B158DRAFT_1176 0.22 +0.0 1,215,422 + B158DRAFT_1176 0.22 -0.9 1,215,430 - B158DRAFT_1176 0.23 -3.6 1,215,475 - B158DRAFT_1176 0.28 -0.5 1,215,480 - B158DRAFT_1176 0.29 +0.8 1,215,498 - B158DRAFT_1176 0.31 +1.2 1,215,521 + B158DRAFT_1176 0.34 -0.4 1,215,526 + B158DRAFT_1176 0.34 -0.2 1,215,534 - B158DRAFT_1176 0.35 -1.2 1,215,543 - B158DRAFT_1176 0.36 +0.6 1,215,557 + B158DRAFT_1176 0.38 -0.4 1,215,589 - B158DRAFT_1176 0.41 -2.0 1,215,600 - B158DRAFT_1176 0.43 -0.3 1,215,600 - B158DRAFT_1176 0.43 -0.2 1,215,637 - B158DRAFT_1176 0.47 -0.9 1,215,662 + B158DRAFT_1176 0.50 -1.7 1,215,668 - B158DRAFT_1176 0.50 -0.2 1,215,675 + B158DRAFT_1176 0.51 +1.5 1,215,675 + B158DRAFT_1176 0.51 -0.1 1,215,692 + B158DRAFT_1176 0.53 +0.1 1,215,709 - B158DRAFT_1176 0.55 +0.6 1,215,815 + B158DRAFT_1176 0.67 +1.7 1,215,823 - B158DRAFT_1176 0.68 -0.8 1,215,833 - B158DRAFT_1176 0.69 -0.8 1,215,958 - B158DRAFT_1176 0.83 +0.5 1,215,958 - B158DRAFT_1176 0.83 +0.1 1,215,983 + B158DRAFT_1176 0.86 -1.0 1,215,991 - B158DRAFT_1176 0.87 -0.1 1,215,991 - B158DRAFT_1176 0.87 -0.4 1,215,991 - B158DRAFT_1176 0.87 -1.7 1,215,997 + B158DRAFT_1176 0.88 +2.0 1,215,997 + B158DRAFT_1176 0.88 -0.6 1,216,022 - +1.7 1,216,048 + -1.9 1,216,051 - +0.1 1,216,106 - +1.0 1,216,164 + -0.8 1,216,225 - +0.9 1,216,259 + B158DRAFT_1177 0.13 -1.6 1,216,266 + B158DRAFT_1177 0.13 +1.5 1,216,266 + B158DRAFT_1177 0.13 -1.2 1,216,267 - B158DRAFT_1177 0.14 -1.5 1,216,267 - B158DRAFT_1177 0.14 -0.2 1,216,278 + B158DRAFT_1177 0.15 -0.8 1,216,286 - B158DRAFT_1177 0.15 -0.2 1,216,315 + B158DRAFT_1177 0.18 -1.5 1,216,321 + B158DRAFT_1177 0.18 +1.0 1,216,324 - B158DRAFT_1177 0.19 +2.3 1,216,329 - B158DRAFT_1177 0.19 -1.2 1,216,334 - B158DRAFT_1177 0.20 -1.6 1,216,447 - B158DRAFT_1177 0.30 -0.4 1,216,472 - B158DRAFT_1177 0.32 -2.5 1,216,531 + B158DRAFT_1177 0.37 +0.1 1,216,654 + B158DRAFT_1177 0.48 +0.1 1,216,654 + B158DRAFT_1177 0.48 -0.3 1,216,662 - B158DRAFT_1177 0.49 +0.9 1,216,662 - B158DRAFT_1177 0.49 +1.1 1,216,662 - B158DRAFT_1177 0.49 -0.1 1,216,668 + B158DRAFT_1177 0.49 -1.7 1,216,702 - B158DRAFT_1177 0.52 -1.5 1,216,741 + B158DRAFT_1177 0.56 -1.3 1,216,764 - B158DRAFT_1177 0.58 +1.5 1,216,798 + B158DRAFT_1177 0.61 -0.9 1,216,842 - B158DRAFT_1177 0.65 -0.8 1,216,876 + B158DRAFT_1177 0.68 -1.4 1,216,981 + B158DRAFT_1177 0.77 -1.3 1,216,994 + B158DRAFT_1177 0.78 -0.7 1,217,002 - B158DRAFT_1177 0.79 -0.2 1,217,002 - B158DRAFT_1177 0.79 -2.0 1,217,002 - B158DRAFT_1177 0.79 -1.6 1,217,012 - B158DRAFT_1177 0.80 -0.9 1,217,012 - B158DRAFT_1177 0.80 -0.8 1,217,012 - B158DRAFT_1177 0.80 +1.0 1,217,022 + B158DRAFT_1177 0.81 -1.3 1,217,022 + B158DRAFT_1177 0.81 -1.9 1,217,022 + B158DRAFT_1177 0.81 -0.3 1,217,039 + B158DRAFT_1177 0.82 -0.9 1,217,039 + B158DRAFT_1177 0.82 -0.0 1,217,044 + B158DRAFT_1177 0.83 -1.9 1,217,061 - B158DRAFT_1177 0.84 +0.4 1,217,082 + B158DRAFT_1177 0.86 -2.9
Or see this region's nucleotide sequence