Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1174

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1172 and B158DRAFT_1173 are separated by 188 nucleotidesB158DRAFT_1173 and B158DRAFT_1174 are separated by 3 nucleotidesB158DRAFT_1174 and B158DRAFT_1175 are separated by 86 nucleotidesB158DRAFT_1175 and B158DRAFT_1176 are separated by 429 nucleotides B158DRAFT_1172: B158DRAFT_1172 - Uncharacterized protein conserved in bacteria, at 1,211,940 to 1,213,736 _1172 B158DRAFT_1173: B158DRAFT_1173 - hypothetical protein, at 1,213,925 to 1,214,395 _1173 B158DRAFT_1174: B158DRAFT_1174 - Predicted transcriptional regulators, at 1,214,399 to 1,214,623 _1174 B158DRAFT_1175: B158DRAFT_1175 - tRNA_Leu_CAA, at 1,214,710 to 1,214,796 _1175 B158DRAFT_1176: B158DRAFT_1176 - hypothetical protein, at 1,215,226 to 1,216,104 _1176 Position (kb) 1214 1215Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1213.429 kb on - strand, within B158DRAFT_1172at 1213.429 kb on - strand, within B158DRAFT_1172at 1213.443 kb on - strand, within B158DRAFT_1172at 1213.530 kb on - strand, within B158DRAFT_1172at 1213.530 kb on - strand, within B158DRAFT_1172at 1213.540 kb on + strand, within B158DRAFT_1172at 1213.540 kb on - strand, within B158DRAFT_1172at 1213.546 kb on + strand, within B158DRAFT_1172at 1213.554 kb on - strand, within B158DRAFT_1172at 1213.665 kb on - strandat 1213.734 kb on - strandat 1213.870 kb on + strandat 1213.941 kb on + strandat 1213.971 kb on + strandat 1214.043 kb on - strand, within B158DRAFT_1173at 1214.049 kb on - strand, within B158DRAFT_1173at 1214.062 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.068 kb on + strand, within B158DRAFT_1173at 1214.070 kb on - strand, within B158DRAFT_1173at 1214.075 kb on - strand, within B158DRAFT_1173at 1214.076 kb on - strand, within B158DRAFT_1173at 1214.082 kb on + strand, within B158DRAFT_1173at 1214.084 kb on + strand, within B158DRAFT_1173at 1214.160 kb on - strand, within B158DRAFT_1173at 1214.168 kb on - strand, within B158DRAFT_1173at 1214.287 kb on + strand, within B158DRAFT_1173at 1214.295 kb on - strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.301 kb on + strand, within B158DRAFT_1173at 1214.309 kb on - strand, within B158DRAFT_1173at 1214.389 kb on + strandat 1214.389 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.402 kb on - strandat 1214.438 kb on + strand, within B158DRAFT_1174at 1214.521 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.571 kb on - strand, within B158DRAFT_1174at 1214.585 kb on + strand, within B158DRAFT_1174at 1214.593 kb on - strand, within B158DRAFT_1174at 1214.627 kb on + strandat 1214.635 kb on - strandat 1214.635 kb on - strandat 1214.906 kb on + strandat 1214.914 kb on - strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1215.281 kb on - strandat 1215.297 kb on + strandat 1215.343 kb on - strand, within B158DRAFT_1176at 1215.343 kb on - strand, within B158DRAFT_1176at 1215.348 kb on - strand, within B158DRAFT_1176at 1215.356 kb on + strand, within B158DRAFT_1176at 1215.384 kb on - strand, within B158DRAFT_1176at 1215.397 kb on + strand, within B158DRAFT_1176at 1215.405 kb on - strand, within B158DRAFT_1176at 1215.422 kb on + strand, within B158DRAFT_1176at 1215.422 kb on + strand, within B158DRAFT_1176at 1215.430 kb on - strand, within B158DRAFT_1176at 1215.475 kb on - strand, within B158DRAFT_1176at 1215.480 kb on - strand, within B158DRAFT_1176at 1215.498 kb on - strand, within B158DRAFT_1176at 1215.521 kb on + strand, within B158DRAFT_1176at 1215.526 kb on + strand, within B158DRAFT_1176at 1215.534 kb on - strand, within B158DRAFT_1176at 1215.543 kb on - strand, within B158DRAFT_1176at 1215.557 kb on + strand, within B158DRAFT_1176at 1215.589 kb on - strand, within B158DRAFT_1176at 1215.600 kb on - strand, within B158DRAFT_1176at 1215.600 kb on - strand, within B158DRAFT_1176

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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1,213,429 - B158DRAFT_1172 0.83 +0.5
1,213,429 - B158DRAFT_1172 0.83 -1.4
1,213,443 - B158DRAFT_1172 0.84 -0.4
1,213,530 - B158DRAFT_1172 0.88 -0.7
1,213,530 - B158DRAFT_1172 0.88 +0.1
1,213,540 + B158DRAFT_1172 0.89 -0.4
1,213,540 - B158DRAFT_1172 0.89 -1.2
1,213,546 + B158DRAFT_1172 0.89 -0.6
1,213,554 - B158DRAFT_1172 0.90 +0.4
1,213,665 - -1.4
1,213,734 - -0.7
1,213,870 + +0.4
1,213,941 + -0.9
1,213,971 + +0.5
1,214,043 - B158DRAFT_1173 0.25 +0.7
1,214,049 - B158DRAFT_1173 0.26 -0.1
1,214,062 + B158DRAFT_1173 0.29 +0.7
1,214,067 + B158DRAFT_1173 0.30 +0.6
1,214,067 + B158DRAFT_1173 0.30 +0.3
1,214,067 + B158DRAFT_1173 0.30 -0.5
1,214,067 + B158DRAFT_1173 0.30 -0.4
1,214,068 + B158DRAFT_1173 0.30 +0.1
1,214,070 - B158DRAFT_1173 0.31 -0.1
1,214,075 - B158DRAFT_1173 0.32 +2.2
1,214,076 - B158DRAFT_1173 0.32 -1.7
1,214,082 + B158DRAFT_1173 0.33 -0.3
1,214,084 + B158DRAFT_1173 0.34 -0.4
1,214,160 - B158DRAFT_1173 0.50 -1.7
1,214,168 - B158DRAFT_1173 0.52 -0.4
1,214,287 + B158DRAFT_1173 0.77 -0.2
1,214,295 - B158DRAFT_1173 0.79 -1.0
1,214,296 + B158DRAFT_1173 0.79 +0.4
1,214,296 + B158DRAFT_1173 0.79 +0.1
1,214,301 + B158DRAFT_1173 0.80 +0.4
1,214,309 - B158DRAFT_1173 0.82 -0.0
1,214,389 + -0.2
1,214,389 + +0.6
1,214,394 + +1.0
1,214,394 + +1.1
1,214,394 + -1.3
1,214,394 + +2.5
1,214,394 + -1.7
1,214,394 + -0.7
1,214,394 + -0.5
1,214,402 - -0.1
1,214,438 + B158DRAFT_1174 0.17 -0.6
1,214,521 + B158DRAFT_1174 0.54 -0.7
1,214,563 + B158DRAFT_1174 0.73 -1.2
1,214,563 + B158DRAFT_1174 0.73 -0.8
1,214,571 - B158DRAFT_1174 0.76 -1.2
1,214,585 + B158DRAFT_1174 0.83 -0.1
1,214,593 - B158DRAFT_1174 0.86 -1.8
1,214,627 + -0.6
1,214,635 - -1.8
1,214,635 - -0.5
1,214,906 + -2.3
1,214,914 - -1.9
1,214,916 + -1.3
1,214,916 + +1.2
1,214,916 + -1.7
1,214,916 + -1.3
1,214,916 + -0.1
1,214,924 - -2.5
1,214,924 - -0.7
1,214,924 - -1.6
1,214,924 - -0.9
1,215,281 - -1.8
1,215,297 + -1.1
1,215,343 - B158DRAFT_1176 0.13 -0.4
1,215,343 - B158DRAFT_1176 0.13 -1.4
1,215,348 - B158DRAFT_1176 0.14 +0.3
1,215,356 + B158DRAFT_1176 0.15 -0.0
1,215,384 - B158DRAFT_1176 0.18 -1.8
1,215,397 + B158DRAFT_1176 0.19 -0.4
1,215,405 - B158DRAFT_1176 0.20 -0.5
1,215,422 + B158DRAFT_1176 0.22 +0.0
1,215,422 + B158DRAFT_1176 0.22 -0.9
1,215,430 - B158DRAFT_1176 0.23 -3.6
1,215,475 - B158DRAFT_1176 0.28 -0.5
1,215,480 - B158DRAFT_1176 0.29 +0.8
1,215,498 - B158DRAFT_1176 0.31 +1.2
1,215,521 + B158DRAFT_1176 0.34 -0.4
1,215,526 + B158DRAFT_1176 0.34 -0.2
1,215,534 - B158DRAFT_1176 0.35 -1.2
1,215,543 - B158DRAFT_1176 0.36 +0.6
1,215,557 + B158DRAFT_1176 0.38 -0.4
1,215,589 - B158DRAFT_1176 0.41 -2.0
1,215,600 - B158DRAFT_1176 0.43 -0.3
1,215,600 - B158DRAFT_1176 0.43 -0.2

Or see this region's nucleotide sequence