Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1172 and B158DRAFT_1173 are separated by 188 nucleotides B158DRAFT_1173 and B158DRAFT_1174 are separated by 3 nucleotides B158DRAFT_1174 and B158DRAFT_1175 are separated by 86 nucleotides B158DRAFT_1175 and B158DRAFT_1176 are separated by 429 nucleotides
B158DRAFT_1172: B158DRAFT_1172 - Uncharacterized protein conserved in bacteria, at 1,211,940 to 1,213,736
_1172
B158DRAFT_1173: B158DRAFT_1173 - hypothetical protein, at 1,213,925 to 1,214,395
_1173
B158DRAFT_1174: B158DRAFT_1174 - Predicted transcriptional regulators, at 1,214,399 to 1,214,623
_1174
B158DRAFT_1175: B158DRAFT_1175 - tRNA_Leu_CAA, at 1,214,710 to 1,214,796
_1175
B158DRAFT_1176: B158DRAFT_1176 - hypothetical protein, at 1,215,226 to 1,216,104
_1176
Position (kb)
1213
1214
1215 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1212.964 kb on - strand, within B158DRAFT_1172 at 1212.964 kb on - strand, within B158DRAFT_1172 at 1212.990 kb on + strand, within B158DRAFT_1172 at 1212.990 kb on + strand, within B158DRAFT_1172 at 1212.990 kb on + strand, within B158DRAFT_1172 at 1212.990 kb on + strand, within B158DRAFT_1172 at 1212.998 kb on - strand, within B158DRAFT_1172 at 1212.998 kb on - strand, within B158DRAFT_1172 at 1212.998 kb on - strand, within B158DRAFT_1172 at 1212.998 kb on - strand, within B158DRAFT_1172 at 1212.998 kb on - strand, within B158DRAFT_1172 at 1213.010 kb on - strand, within B158DRAFT_1172 at 1213.031 kb on + strand, within B158DRAFT_1172 at 1213.034 kb on - strand, within B158DRAFT_1172 at 1213.034 kb on - strand, within B158DRAFT_1172 at 1213.039 kb on - strand, within B158DRAFT_1172 at 1213.041 kb on + strand, within B158DRAFT_1172 at 1213.042 kb on - strand, within B158DRAFT_1172 at 1213.081 kb on - strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.101 kb on + strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.109 kb on - strand, within B158DRAFT_1172 at 1213.114 kb on - strand, within B158DRAFT_1172 at 1213.114 kb on - strand, within B158DRAFT_1172 at 1213.122 kb on + strand, within B158DRAFT_1172 at 1213.130 kb on - strand, within B158DRAFT_1172 at 1213.133 kb on + strand, within B158DRAFT_1172 at 1213.139 kb on + strand, within B158DRAFT_1172 at 1213.151 kb on + strand, within B158DRAFT_1172 at 1213.151 kb on + strand, within B158DRAFT_1172 at 1213.169 kb on - strand, within B158DRAFT_1172 at 1213.214 kb on + strand, within B158DRAFT_1172 at 1213.224 kb on + strand, within B158DRAFT_1172 at 1213.227 kb on - strand, within B158DRAFT_1172 at 1213.237 kb on - strand, within B158DRAFT_1172 at 1213.293 kb on + strand, within B158DRAFT_1172 at 1213.294 kb on + strand, within B158DRAFT_1172 at 1213.372 kb on + strand, within B158DRAFT_1172 at 1213.372 kb on + strand, within B158DRAFT_1172 at 1213.372 kb on + strand, within B158DRAFT_1172 at 1213.429 kb on - strand, within B158DRAFT_1172 at 1213.429 kb on - strand, within B158DRAFT_1172 at 1213.443 kb on - strand, within B158DRAFT_1172 at 1213.530 kb on - strand, within B158DRAFT_1172 at 1213.530 kb on - strand, within B158DRAFT_1172 at 1213.540 kb on + strand, within B158DRAFT_1172 at 1213.540 kb on - strand, within B158DRAFT_1172 at 1213.546 kb on + strand, within B158DRAFT_1172 at 1213.554 kb on - strand, within B158DRAFT_1172 at 1213.665 kb on - strand at 1213.734 kb on - strand at 1213.870 kb on + strand at 1213.941 kb on + strand at 1213.971 kb on + strand at 1214.043 kb on - strand, within B158DRAFT_1173 at 1214.049 kb on - strand, within B158DRAFT_1173 at 1214.062 kb on + strand, within B158DRAFT_1173 at 1214.067 kb on + strand, within B158DRAFT_1173 at 1214.067 kb on + strand, within B158DRAFT_1173 at 1214.067 kb on + strand, within B158DRAFT_1173 at 1214.067 kb on + strand, within B158DRAFT_1173 at 1214.068 kb on + strand, within B158DRAFT_1173 at 1214.070 kb on - strand, within B158DRAFT_1173 at 1214.075 kb on - strand, within B158DRAFT_1173 at 1214.076 kb on - strand, within B158DRAFT_1173 at 1214.082 kb on + strand, within B158DRAFT_1173 at 1214.084 kb on + strand, within B158DRAFT_1173 at 1214.160 kb on - strand, within B158DRAFT_1173 at 1214.168 kb on - strand, within B158DRAFT_1173 at 1214.287 kb on + strand, within B158DRAFT_1173 at 1214.295 kb on - strand, within B158DRAFT_1173 at 1214.296 kb on + strand, within B158DRAFT_1173 at 1214.296 kb on + strand, within B158DRAFT_1173 at 1214.301 kb on + strand, within B158DRAFT_1173 at 1214.309 kb on - strand, within B158DRAFT_1173 at 1214.389 kb on + strand at 1214.389 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.394 kb on + strand at 1214.402 kb on - strand at 1214.438 kb on + strand, within B158DRAFT_1174 at 1214.521 kb on + strand, within B158DRAFT_1174 at 1214.563 kb on + strand, within B158DRAFT_1174 at 1214.563 kb on + strand, within B158DRAFT_1174 at 1214.571 kb on - strand, within B158DRAFT_1174 at 1214.585 kb on + strand, within B158DRAFT_1174 at 1214.593 kb on - strand, within B158DRAFT_1174 at 1214.627 kb on + strand at 1214.635 kb on - strand at 1214.635 kb on - strand at 1214.906 kb on + strand at 1214.914 kb on - strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.916 kb on + strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1214.924 kb on - strand at 1215.281 kb on - strand at 1215.297 kb on + strand at 1215.343 kb on - strand, within B158DRAFT_1176 at 1215.343 kb on - strand, within B158DRAFT_1176 at 1215.348 kb on - strand, within B158DRAFT_1176 at 1215.356 kb on + strand, within B158DRAFT_1176 at 1215.384 kb on - strand, within B158DRAFT_1176
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,212,964 - B158DRAFT_1172 0.57 -0.6 1,212,964 - B158DRAFT_1172 0.57 -0.1 1,212,990 + B158DRAFT_1172 0.58 -1.0 1,212,990 + B158DRAFT_1172 0.58 -0.4 1,212,990 + B158DRAFT_1172 0.58 -0.5 1,212,990 + B158DRAFT_1172 0.58 -0.3 1,212,998 - B158DRAFT_1172 0.59 +0.2 1,212,998 - B158DRAFT_1172 0.59 +1.4 1,212,998 - B158DRAFT_1172 0.59 -0.0 1,212,998 - B158DRAFT_1172 0.59 -0.0 1,212,998 - B158DRAFT_1172 0.59 -0.4 1,213,010 - B158DRAFT_1172 0.60 -0.5 1,213,031 + B158DRAFT_1172 0.61 -1.0 1,213,034 - B158DRAFT_1172 0.61 -0.4 1,213,034 - B158DRAFT_1172 0.61 -0.2 1,213,039 - B158DRAFT_1172 0.61 +0.9 1,213,041 + B158DRAFT_1172 0.61 +0.0 1,213,042 - B158DRAFT_1172 0.61 +0.0 1,213,081 - B158DRAFT_1172 0.63 +0.3 1,213,101 + B158DRAFT_1172 0.65 -0.0 1,213,101 + B158DRAFT_1172 0.65 -0.4 1,213,101 + B158DRAFT_1172 0.65 -1.0 1,213,101 + B158DRAFT_1172 0.65 +0.1 1,213,101 + B158DRAFT_1172 0.65 -1.3 1,213,101 + B158DRAFT_1172 0.65 -0.3 1,213,101 + B158DRAFT_1172 0.65 -0.8 1,213,101 + B158DRAFT_1172 0.65 -0.0 1,213,109 - B158DRAFT_1172 0.65 -2.6 1,213,109 - B158DRAFT_1172 0.65 -0.1 1,213,109 - B158DRAFT_1172 0.65 -0.5 1,213,109 - B158DRAFT_1172 0.65 +1.4 1,213,109 - B158DRAFT_1172 0.65 -0.6 1,213,109 - B158DRAFT_1172 0.65 -0.6 1,213,109 - B158DRAFT_1172 0.65 +0.9 1,213,109 - B158DRAFT_1172 0.65 -1.1 1,213,109 - B158DRAFT_1172 0.65 -0.8 1,213,109 - B158DRAFT_1172 0.65 +0.2 1,213,109 - B158DRAFT_1172 0.65 -1.1 1,213,114 - B158DRAFT_1172 0.65 -0.9 1,213,114 - B158DRAFT_1172 0.65 +1.5 1,213,122 + B158DRAFT_1172 0.66 -0.9 1,213,130 - B158DRAFT_1172 0.66 -0.2 1,213,133 + B158DRAFT_1172 0.66 +0.8 1,213,139 + B158DRAFT_1172 0.67 -1.0 1,213,151 + B158DRAFT_1172 0.67 -0.4 1,213,151 + B158DRAFT_1172 0.67 -0.2 1,213,169 - B158DRAFT_1172 0.68 -1.2 1,213,214 + B158DRAFT_1172 0.71 -1.2 1,213,224 + B158DRAFT_1172 0.71 -0.3 1,213,227 - B158DRAFT_1172 0.72 -1.6 1,213,237 - B158DRAFT_1172 0.72 -2.0 1,213,293 + B158DRAFT_1172 0.75 -1.1 1,213,294 + B158DRAFT_1172 0.75 +0.1 1,213,372 + B158DRAFT_1172 0.80 -1.6 1,213,372 + B158DRAFT_1172 0.80 +0.6 1,213,372 + B158DRAFT_1172 0.80 -1.3 1,213,429 - B158DRAFT_1172 0.83 +0.5 1,213,429 - B158DRAFT_1172 0.83 -1.4 1,213,443 - B158DRAFT_1172 0.84 -0.4 1,213,530 - B158DRAFT_1172 0.88 -0.7 1,213,530 - B158DRAFT_1172 0.88 +0.1 1,213,540 + B158DRAFT_1172 0.89 -0.4 1,213,540 - B158DRAFT_1172 0.89 -1.2 1,213,546 + B158DRAFT_1172 0.89 -0.6 1,213,554 - B158DRAFT_1172 0.90 +0.4 1,213,665 - -1.4 1,213,734 - -0.7 1,213,870 + +0.4 1,213,941 + -0.9 1,213,971 + +0.5 1,214,043 - B158DRAFT_1173 0.25 +0.7 1,214,049 - B158DRAFT_1173 0.26 -0.1 1,214,062 + B158DRAFT_1173 0.29 +0.7 1,214,067 + B158DRAFT_1173 0.30 +0.6 1,214,067 + B158DRAFT_1173 0.30 +0.3 1,214,067 + B158DRAFT_1173 0.30 -0.5 1,214,067 + B158DRAFT_1173 0.30 -0.4 1,214,068 + B158DRAFT_1173 0.30 +0.1 1,214,070 - B158DRAFT_1173 0.31 -0.1 1,214,075 - B158DRAFT_1173 0.32 +2.2 1,214,076 - B158DRAFT_1173 0.32 -1.7 1,214,082 + B158DRAFT_1173 0.33 -0.3 1,214,084 + B158DRAFT_1173 0.34 -0.4 1,214,160 - B158DRAFT_1173 0.50 -1.7 1,214,168 - B158DRAFT_1173 0.52 -0.4 1,214,287 + B158DRAFT_1173 0.77 -0.2 1,214,295 - B158DRAFT_1173 0.79 -1.0 1,214,296 + B158DRAFT_1173 0.79 +0.4 1,214,296 + B158DRAFT_1173 0.79 +0.1 1,214,301 + B158DRAFT_1173 0.80 +0.4 1,214,309 - B158DRAFT_1173 0.82 -0.0 1,214,389 + -0.2 1,214,389 + +0.6 1,214,394 + +1.0 1,214,394 + +1.1 1,214,394 + -1.3 1,214,394 + +2.5 1,214,394 + -1.7 1,214,394 + -0.7 1,214,394 + -0.5 1,214,402 - -0.1 1,214,438 + B158DRAFT_1174 0.17 -0.6 1,214,521 + B158DRAFT_1174 0.54 -0.7 1,214,563 + B158DRAFT_1174 0.73 -1.2 1,214,563 + B158DRAFT_1174 0.73 -0.8 1,214,571 - B158DRAFT_1174 0.76 -1.2 1,214,585 + B158DRAFT_1174 0.83 -0.1 1,214,593 - B158DRAFT_1174 0.86 -1.8 1,214,627 + -0.6 1,214,635 - -1.8 1,214,635 - -0.5 1,214,906 + -2.3 1,214,914 - -1.9 1,214,916 + -1.3 1,214,916 + +1.2 1,214,916 + -1.7 1,214,916 + -1.3 1,214,916 + -0.1 1,214,924 - -2.5 1,214,924 - -0.7 1,214,924 - -1.6 1,214,924 - -0.9 1,215,281 - -1.8 1,215,297 + -1.1 1,215,343 - B158DRAFT_1176 0.13 -0.4 1,215,343 - B158DRAFT_1176 0.13 -1.4 1,215,348 - B158DRAFT_1176 0.14 +0.3 1,215,356 + B158DRAFT_1176 0.15 -0.0 1,215,384 - B158DRAFT_1176 0.18 -1.8
Or see this region's nucleotide sequence