Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1086 and B158DRAFT_1087 are separated by 42 nucleotides B158DRAFT_1087 and B158DRAFT_1088 are separated by 10 nucleotides
B158DRAFT_1086: B158DRAFT_1086 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267), at 1,122,387 to 1,123,586
_1086
B158DRAFT_1087: B158DRAFT_1087 - site-2 protease. Metallo peptidase. MEROPS family M50B, at 1,123,629 to 1,124,966
_1087
B158DRAFT_1088: B158DRAFT_1088 - Beta-barrel assembly machine subunit BamA, at 1,124,977 to 1,127,448
_1088
Position (kb)
1123
1124
1125 Strain fitness (log2 ratio)
-2
-1
0
1 at 1123.650 kb on + strand at 1123.660 kb on + strand at 1123.660 kb on + strand at 1123.687 kb on + strand at 1123.706 kb on + strand at 1123.706 kb on + strand at 1123.706 kb on + strand at 1123.706 kb on + strand at 1123.706 kb on + strand at 1123.714 kb on - strand at 1123.714 kb on - strand at 1123.737 kb on + strand at 1123.737 kb on + strand at 1123.883 kb on + strand, within B158DRAFT_1087 at 1123.891 kb on - strand, within B158DRAFT_1087 at 1123.970 kb on + strand, within B158DRAFT_1087 at 1123.978 kb on - strand, within B158DRAFT_1087 at 1123.983 kb on + strand, within B158DRAFT_1087 at 1123.983 kb on + strand, within B158DRAFT_1087 at 1124.167 kb on + strand, within B158DRAFT_1087 at 1124.217 kb on - strand, within B158DRAFT_1087 at 1124.217 kb on - strand, within B158DRAFT_1087 at 1124.363 kb on - strand, within B158DRAFT_1087 at 1124.436 kb on + strand, within B158DRAFT_1087 at 1124.464 kb on + strand, within B158DRAFT_1087 at 1124.469 kb on + strand, within B158DRAFT_1087 at 1124.474 kb on + strand, within B158DRAFT_1087 at 1124.482 kb on - strand, within B158DRAFT_1087 at 1124.496 kb on - strand, within B158DRAFT_1087 at 1124.531 kb on + strand, within B158DRAFT_1087 at 1124.531 kb on + strand, within B158DRAFT_1087 at 1124.539 kb on - strand, within B158DRAFT_1087 at 1124.539 kb on - strand, within B158DRAFT_1087 at 1124.601 kb on + strand, within B158DRAFT_1087 at 1124.601 kb on + strand, within B158DRAFT_1087 at 1124.601 kb on + strand, within B158DRAFT_1087 at 1124.601 kb on + strand, within B158DRAFT_1087 at 1124.601 kb on + strand, within B158DRAFT_1087 at 1124.609 kb on - strand, within B158DRAFT_1087 at 1124.609 kb on - strand, within B158DRAFT_1087 at 1124.656 kb on + strand, within B158DRAFT_1087 at 1124.707 kb on + strand, within B158DRAFT_1087 at 1124.707 kb on + strand, within B158DRAFT_1087 at 1124.713 kb on - strand, within B158DRAFT_1087 at 1124.713 kb on - strand, within B158DRAFT_1087 at 1124.715 kb on - strand, within B158DRAFT_1087 at 1124.721 kb on + strand, within B158DRAFT_1087 at 1124.724 kb on - strand, within B158DRAFT_1087 at 1124.726 kb on + strand, within B158DRAFT_1087 at 1124.726 kb on + strand, within B158DRAFT_1087 at 1124.726 kb on + strand, within B158DRAFT_1087 at 1124.734 kb on - strand, within B158DRAFT_1087
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,123,650 + -0.6 1,123,660 + -1.4 1,123,660 + -0.7 1,123,687 + -1.5 1,123,706 + -1.0 1,123,706 + -1.1 1,123,706 + -1.3 1,123,706 + -1.2 1,123,706 + +0.9 1,123,714 - -0.3 1,123,714 - +0.8 1,123,737 + -0.8 1,123,737 + -1.4 1,123,883 + B158DRAFT_1087 0.19 -0.2 1,123,891 - B158DRAFT_1087 0.20 +0.0 1,123,970 + B158DRAFT_1087 0.25 -0.3 1,123,978 - B158DRAFT_1087 0.26 -1.2 1,123,983 + B158DRAFT_1087 0.26 -1.6 1,123,983 + B158DRAFT_1087 0.26 -1.1 1,124,167 + B158DRAFT_1087 0.40 +0.0 1,124,217 - B158DRAFT_1087 0.44 -0.2 1,124,217 - B158DRAFT_1087 0.44 -2.3 1,124,363 - B158DRAFT_1087 0.55 -1.8 1,124,436 + B158DRAFT_1087 0.60 +0.9 1,124,464 + B158DRAFT_1087 0.62 -2.5 1,124,469 + B158DRAFT_1087 0.63 +1.1 1,124,474 + B158DRAFT_1087 0.63 -0.9 1,124,482 - B158DRAFT_1087 0.64 -1.3 1,124,496 - B158DRAFT_1087 0.65 +0.1 1,124,531 + B158DRAFT_1087 0.67 -0.6 1,124,531 + B158DRAFT_1087 0.67 -0.4 1,124,539 - B158DRAFT_1087 0.68 -1.1 1,124,539 - B158DRAFT_1087 0.68 -0.6 1,124,601 + B158DRAFT_1087 0.73 +0.1 1,124,601 + B158DRAFT_1087 0.73 -0.6 1,124,601 + B158DRAFT_1087 0.73 -1.5 1,124,601 + B158DRAFT_1087 0.73 -0.3 1,124,601 + B158DRAFT_1087 0.73 +1.1 1,124,609 - B158DRAFT_1087 0.73 -0.2 1,124,609 - B158DRAFT_1087 0.73 -1.6 1,124,656 + B158DRAFT_1087 0.77 -0.1 1,124,707 + B158DRAFT_1087 0.81 -0.7 1,124,707 + B158DRAFT_1087 0.81 +1.7 1,124,713 - B158DRAFT_1087 0.81 -0.3 1,124,713 - B158DRAFT_1087 0.81 +0.2 1,124,715 - B158DRAFT_1087 0.81 -2.1 1,124,721 + B158DRAFT_1087 0.82 -1.5 1,124,724 - B158DRAFT_1087 0.82 +0.2 1,124,726 + B158DRAFT_1087 0.82 -2.0 1,124,726 + B158DRAFT_1087 0.82 -0.8 1,124,726 + B158DRAFT_1087 0.82 +0.9 1,124,734 - B158DRAFT_1087 0.83 -0.7
Or see this region's nucleotide sequence