Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1022 and B158DRAFT_1023 are separated by 78 nucleotides B158DRAFT_1023 and B158DRAFT_1024 are separated by 118 nucleotides B158DRAFT_1024 and B158DRAFT_1025 are separated by 28 nucleotides
B158DRAFT_1022: B158DRAFT_1022 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 1,062,862 to 1,064,259
_1022
B158DRAFT_1023: B158DRAFT_1023 - Helix-turn-helix., at 1,064,338 to 1,065,081
_1023
B158DRAFT_1024: B158DRAFT_1024 - Phosphatidylglycerophosphate synthase, at 1,065,200 to 1,065,790
_1024
B158DRAFT_1025: B158DRAFT_1025 - Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase, at 1,065,819 to 1,066,778
_1025
Position (kb)
1065
1066 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1064.376 kb on + strand at 1064.397 kb on + strand at 1064.397 kb on + strand at 1064.476 kb on - strand, within B158DRAFT_1023 at 1064.476 kb on - strand, within B158DRAFT_1023 at 1064.613 kb on - strand, within B158DRAFT_1023 at 1064.619 kb on - strand, within B158DRAFT_1023 at 1064.767 kb on + strand, within B158DRAFT_1023 at 1064.915 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.997 kb on - strand, within B158DRAFT_1023 at 1064.997 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.006 kb on + strand, within B158DRAFT_1023 at 1065.029 kb on + strand at 1065.037 kb on - strand at 1065.287 kb on + strand, within B158DRAFT_1024 at 1065.287 kb on + strand, within B158DRAFT_1024 at 1065.290 kb on - strand, within B158DRAFT_1024 at 1065.290 kb on - strand, within B158DRAFT_1024 at 1065.329 kb on + strand, within B158DRAFT_1024 at 1065.330 kb on + strand, within B158DRAFT_1024 at 1065.330 kb on - strand, within B158DRAFT_1024 at 1065.349 kb on - strand, within B158DRAFT_1024 at 1065.401 kb on + strand, within B158DRAFT_1024 at 1065.401 kb on + strand, within B158DRAFT_1024 at 1065.409 kb on - strand, within B158DRAFT_1024 at 1065.425 kb on - strand, within B158DRAFT_1024 at 1065.447 kb on + strand, within B158DRAFT_1024 at 1065.489 kb on + strand, within B158DRAFT_1024 at 1065.532 kb on + strand, within B158DRAFT_1024 at 1065.544 kb on + strand, within B158DRAFT_1024 at 1065.608 kb on - strand, within B158DRAFT_1024 at 1065.613 kb on + strand, within B158DRAFT_1024 at 1065.648 kb on - strand, within B158DRAFT_1024 at 1065.728 kb on - strand, within B158DRAFT_1024 at 1065.785 kb on - strand at 1065.904 kb on + strand at 1065.943 kb on - strand, within B158DRAFT_1025 at 1065.943 kb on - strand, within B158DRAFT_1025 at 1065.943 kb on - strand, within B158DRAFT_1025 at 1065.945 kb on + strand, within B158DRAFT_1025 at 1065.945 kb on + strand, within B158DRAFT_1025 at 1065.946 kb on + strand, within B158DRAFT_1025 at 1065.946 kb on + strand, within B158DRAFT_1025 at 1065.947 kb on + strand, within B158DRAFT_1025 at 1065.954 kb on - strand, within B158DRAFT_1025 at 1065.954 kb on - strand, within B158DRAFT_1025 at 1065.959 kb on + strand, within B158DRAFT_1025 at 1065.987 kb on - strand, within B158DRAFT_1025 at 1065.996 kb on + strand, within B158DRAFT_1025 at 1066.014 kb on - strand, within B158DRAFT_1025 at 1066.014 kb on - strand, within B158DRAFT_1025 at 1066.020 kb on - strand, within B158DRAFT_1025 at 1066.026 kb on + strand, within B158DRAFT_1025 at 1066.107 kb on + strand, within B158DRAFT_1025 at 1066.107 kb on + strand, within B158DRAFT_1025 at 1066.112 kb on + strand, within B158DRAFT_1025 at 1066.112 kb on + strand, within B158DRAFT_1025 at 1066.112 kb on + strand, within B158DRAFT_1025 at 1066.113 kb on - strand, within B158DRAFT_1025 at 1066.120 kb on - strand, within B158DRAFT_1025 at 1066.120 kb on - strand, within B158DRAFT_1025 at 1066.194 kb on + strand, within B158DRAFT_1025 at 1066.201 kb on - strand, within B158DRAFT_1025 at 1066.202 kb on - strand, within B158DRAFT_1025 at 1066.227 kb on + strand, within B158DRAFT_1025 at 1066.227 kb on + strand, within B158DRAFT_1025 at 1066.265 kb on + strand, within B158DRAFT_1025 at 1066.273 kb on - strand, within B158DRAFT_1025 at 1066.289 kb on - strand, within B158DRAFT_1025 at 1066.323 kb on + strand, within B158DRAFT_1025 at 1066.331 kb on - strand, within B158DRAFT_1025 at 1066.365 kb on - strand, within B158DRAFT_1025 at 1066.383 kb on + strand, within B158DRAFT_1025 at 1066.383 kb on + strand, within B158DRAFT_1025 at 1066.399 kb on - strand, within B158DRAFT_1025 at 1066.404 kb on - strand, within B158DRAFT_1025 at 1066.415 kb on + strand, within B158DRAFT_1025 at 1066.436 kb on - strand, within B158DRAFT_1025 at 1066.491 kb on - strand, within B158DRAFT_1025 at 1066.503 kb on + strand, within B158DRAFT_1025 at 1066.518 kb on + strand, within B158DRAFT_1025 at 1066.550 kb on + strand, within B158DRAFT_1025 at 1066.559 kb on - strand, within B158DRAFT_1025 at 1066.564 kb on + strand, within B158DRAFT_1025 at 1066.564 kb on + strand, within B158DRAFT_1025 at 1066.564 kb on + strand, within B158DRAFT_1025 at 1066.564 kb on + strand, within B158DRAFT_1025 at 1066.582 kb on - strand, within B158DRAFT_1025 at 1066.596 kb on + strand, within B158DRAFT_1025 at 1066.610 kb on - strand, within B158DRAFT_1025 at 1066.682 kb on + strand, within B158DRAFT_1025 at 1066.687 kb on + strand at 1066.704 kb on + strand at 1066.721 kb on - strand at 1066.721 kb on - strand at 1066.721 kb on - strand at 1066.730 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,064,376 + -0.6 1,064,397 + -2.1 1,064,397 + -0.1 1,064,476 - B158DRAFT_1023 0.19 -0.1 1,064,476 - B158DRAFT_1023 0.19 -1.2 1,064,613 - B158DRAFT_1023 0.37 +1.0 1,064,619 - B158DRAFT_1023 0.38 +0.1 1,064,767 + B158DRAFT_1023 0.58 -0.2 1,064,915 + B158DRAFT_1023 0.78 -0.8 1,064,996 + B158DRAFT_1023 0.88 +0.5 1,064,996 + B158DRAFT_1023 0.88 -0.1 1,064,996 + B158DRAFT_1023 0.88 -1.6 1,064,996 + B158DRAFT_1023 0.88 +1.2 1,064,997 - B158DRAFT_1023 0.89 -1.0 1,064,997 - B158DRAFT_1023 0.89 -0.2 1,065,004 - B158DRAFT_1023 0.90 +1.1 1,065,004 - B158DRAFT_1023 0.90 -1.8 1,065,004 - B158DRAFT_1023 0.90 +2.2 1,065,004 - B158DRAFT_1023 0.90 +0.8 1,065,006 + B158DRAFT_1023 0.90 +0.1 1,065,029 + +0.3 1,065,037 - -0.7 1,065,287 + B158DRAFT_1024 0.15 -1.3 1,065,287 + B158DRAFT_1024 0.15 +1.3 1,065,290 - B158DRAFT_1024 0.15 -2.1 1,065,290 - B158DRAFT_1024 0.15 +0.1 1,065,329 + B158DRAFT_1024 0.22 -0.5 1,065,330 + B158DRAFT_1024 0.22 +0.6 1,065,330 - B158DRAFT_1024 0.22 -1.6 1,065,349 - B158DRAFT_1024 0.25 +0.1 1,065,401 + B158DRAFT_1024 0.34 -0.6 1,065,401 + B158DRAFT_1024 0.34 +0.2 1,065,409 - B158DRAFT_1024 0.35 -0.3 1,065,425 - B158DRAFT_1024 0.38 -1.5 1,065,447 + B158DRAFT_1024 0.42 +0.9 1,065,489 + B158DRAFT_1024 0.49 -0.3 1,065,532 + B158DRAFT_1024 0.56 +0.6 1,065,544 + B158DRAFT_1024 0.58 +1.2 1,065,608 - B158DRAFT_1024 0.69 -0.1 1,065,613 + B158DRAFT_1024 0.70 +0.9 1,065,648 - B158DRAFT_1024 0.76 -0.8 1,065,728 - B158DRAFT_1024 0.89 -0.9 1,065,785 - -0.3 1,065,904 + -0.2 1,065,943 - B158DRAFT_1025 0.13 +0.3 1,065,943 - B158DRAFT_1025 0.13 +1.4 1,065,943 - B158DRAFT_1025 0.13 +0.3 1,065,945 + B158DRAFT_1025 0.13 +0.5 1,065,945 + B158DRAFT_1025 0.13 -0.8 1,065,946 + B158DRAFT_1025 0.13 -1.0 1,065,946 + B158DRAFT_1025 0.13 -0.4 1,065,947 + B158DRAFT_1025 0.13 +0.7 1,065,954 - B158DRAFT_1025 0.14 -1.3 1,065,954 - B158DRAFT_1025 0.14 -0.4 1,065,959 + B158DRAFT_1025 0.15 -1.8 1,065,987 - B158DRAFT_1025 0.17 +0.0 1,065,996 + B158DRAFT_1025 0.18 -1.2 1,066,014 - B158DRAFT_1025 0.20 +1.7 1,066,014 - B158DRAFT_1025 0.20 -2.8 1,066,020 - B158DRAFT_1025 0.21 -0.1 1,066,026 + B158DRAFT_1025 0.22 -0.5 1,066,107 + B158DRAFT_1025 0.30 +1.4 1,066,107 + B158DRAFT_1025 0.30 -0.9 1,066,112 + B158DRAFT_1025 0.31 +2.0 1,066,112 + B158DRAFT_1025 0.31 +0.3 1,066,112 + B158DRAFT_1025 0.31 -0.9 1,066,113 - B158DRAFT_1025 0.31 -1.6 1,066,120 - B158DRAFT_1025 0.31 -0.9 1,066,120 - B158DRAFT_1025 0.31 +0.1 1,066,194 + B158DRAFT_1025 0.39 -2.2 1,066,201 - B158DRAFT_1025 0.40 -0.5 1,066,202 - B158DRAFT_1025 0.40 +0.2 1,066,227 + B158DRAFT_1025 0.42 -1.0 1,066,227 + B158DRAFT_1025 0.42 -1.7 1,066,265 + B158DRAFT_1025 0.46 -0.8 1,066,273 - B158DRAFT_1025 0.47 -1.4 1,066,289 - B158DRAFT_1025 0.49 -0.4 1,066,323 + B158DRAFT_1025 0.53 -1.3 1,066,331 - B158DRAFT_1025 0.53 +0.5 1,066,365 - B158DRAFT_1025 0.57 +0.7 1,066,383 + B158DRAFT_1025 0.59 -0.7 1,066,383 + B158DRAFT_1025 0.59 +0.3 1,066,399 - B158DRAFT_1025 0.60 -0.0 1,066,404 - B158DRAFT_1025 0.61 -1.0 1,066,415 + B158DRAFT_1025 0.62 +0.9 1,066,436 - B158DRAFT_1025 0.64 -1.3 1,066,491 - B158DRAFT_1025 0.70 -0.6 1,066,503 + B158DRAFT_1025 0.71 -0.1 1,066,518 + B158DRAFT_1025 0.73 +0.4 1,066,550 + B158DRAFT_1025 0.76 -0.3 1,066,559 - B158DRAFT_1025 0.77 -1.9 1,066,564 + B158DRAFT_1025 0.78 -0.1 1,066,564 + B158DRAFT_1025 0.78 +1.0 1,066,564 + B158DRAFT_1025 0.78 +0.2 1,066,564 + B158DRAFT_1025 0.78 -1.8 1,066,582 - B158DRAFT_1025 0.79 -0.5 1,066,596 + B158DRAFT_1025 0.81 +4.2 1,066,610 - B158DRAFT_1025 0.82 +2.0 1,066,682 + B158DRAFT_1025 0.90 -2.1 1,066,687 + -1.0 1,066,704 + -2.2 1,066,721 - -1.2 1,066,721 - -0.0 1,066,721 - +0.5 1,066,730 - +0.0
Or see this region's nucleotide sequence