Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0991 and B158DRAFT_0992 overlap by 4 nucleotides B158DRAFT_0992 and B158DRAFT_0993 are separated by 30 nucleotides B158DRAFT_0993 and B158DRAFT_0994 are separated by 354 nucleotides
B158DRAFT_0991: B158DRAFT_0991 - ABC-type multidrug transport system, ATPase component, at 1,024,867 to 1,025,724
_0991
B158DRAFT_0992: B158DRAFT_0992 - hypothetical protein, at 1,025,721 to 1,026,677
_0992
B158DRAFT_0993: B158DRAFT_0993 - hypothetical protein, at 1,026,708 to 1,026,887
_0993
B158DRAFT_0994: B158DRAFT_0994 - putative adhesin (DUF1302) (from data) , at 1,027,242 to 1,029,155
_0994
Position (kb)
1026
1027 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1025.728 kb on - strand at 1025.730 kb on + strand at 1025.730 kb on + strand at 1025.730 kb on + strand at 1025.738 kb on - strand at 1025.780 kb on - strand at 1025.780 kb on - strand at 1025.813 kb on + strand at 1025.838 kb on + strand, within B158DRAFT_0992 at 1025.856 kb on + strand, within B158DRAFT_0992 at 1025.861 kb on + strand, within B158DRAFT_0992 at 1025.869 kb on - strand, within B158DRAFT_0992 at 1025.878 kb on + strand, within B158DRAFT_0992 at 1025.917 kb on + strand, within B158DRAFT_0992 at 1025.917 kb on + strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.925 kb on - strand, within B158DRAFT_0992 at 1025.932 kb on - strand, within B158DRAFT_0992 at 1025.954 kb on - strand, within B158DRAFT_0992 at 1026.159 kb on - strand, within B158DRAFT_0992 at 1026.166 kb on - strand, within B158DRAFT_0992 at 1026.210 kb on - strand, within B158DRAFT_0992 at 1026.288 kb on - strand, within B158DRAFT_0992 at 1026.296 kb on + strand, within B158DRAFT_0992 at 1026.296 kb on + strand, within B158DRAFT_0992 at 1026.296 kb on + strand, within B158DRAFT_0992 at 1026.296 kb on + strand, within B158DRAFT_0992 at 1026.296 kb on + strand, within B158DRAFT_0992 at 1026.304 kb on - strand, within B158DRAFT_0992 at 1026.304 kb on - strand, within B158DRAFT_0992 at 1026.304 kb on - strand, within B158DRAFT_0992 at 1026.309 kb on - strand, within B158DRAFT_0992 at 1026.413 kb on + strand, within B158DRAFT_0992 at 1026.415 kb on + strand, within B158DRAFT_0992 at 1026.421 kb on - strand, within B158DRAFT_0992 at 1026.432 kb on + strand, within B158DRAFT_0992 at 1026.440 kb on - strand, within B158DRAFT_0992 at 1026.461 kb on + strand, within B158DRAFT_0992 at 1026.471 kb on + strand, within B158DRAFT_0992 at 1026.479 kb on - strand, within B158DRAFT_0992 at 1026.479 kb on - strand, within B158DRAFT_0992 at 1026.479 kb on - strand, within B158DRAFT_0992 at 1026.479 kb on - strand, within B158DRAFT_0992 at 1026.551 kb on + strand, within B158DRAFT_0992 at 1026.559 kb on - strand, within B158DRAFT_0992 at 1026.561 kb on + strand, within B158DRAFT_0992 at 1026.569 kb on - strand, within B158DRAFT_0992 at 1026.602 kb on - strand at 1026.625 kb on + strand at 1026.647 kb on + strand at 1026.647 kb on + strand at 1026.647 kb on + strand at 1026.655 kb on - strand at 1026.680 kb on - strand at 1026.690 kb on + strand at 1026.697 kb on + strand at 1026.745 kb on + strand, within B158DRAFT_0993 at 1026.782 kb on - strand, within B158DRAFT_0993 at 1026.784 kb on - strand, within B158DRAFT_0993 at 1026.825 kb on + strand, within B158DRAFT_0993 at 1026.836 kb on + strand, within B158DRAFT_0993 at 1026.857 kb on + strand, within B158DRAFT_0993 at 1026.935 kb on + strand at 1026.943 kb on - strand at 1026.996 kb on - strand at 1027.013 kb on + strand at 1027.075 kb on + strand at 1027.204 kb on - strand at 1027.254 kb on + strand at 1027.262 kb on - strand at 1027.262 kb on - strand at 1027.262 kb on - strand at 1027.342 kb on - strand at 1027.444 kb on + strand, within B158DRAFT_0994 at 1027.508 kb on + strand, within B158DRAFT_0994 at 1027.530 kb on - strand, within B158DRAFT_0994 at 1027.530 kb on - strand, within B158DRAFT_0994 at 1027.536 kb on + strand, within B158DRAFT_0994 at 1027.536 kb on + strand, within B158DRAFT_0994 at 1027.631 kb on + strand, within B158DRAFT_0994 at 1027.631 kb on + strand, within B158DRAFT_0994 at 1027.631 kb on + strand, within B158DRAFT_0994 at 1027.648 kb on + strand, within B158DRAFT_0994 at 1027.648 kb on + strand, within B158DRAFT_0994 at 1027.648 kb on + strand, within B158DRAFT_0994 at 1027.678 kb on + strand, within B158DRAFT_0994 at 1027.678 kb on + strand, within B158DRAFT_0994 at 1027.686 kb on - strand, within B158DRAFT_0994 at 1027.717 kb on + strand, within B158DRAFT_0994 at 1027.741 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.751 kb on + strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.759 kb on - strand, within B158DRAFT_0994 at 1027.834 kb on + strand, within B158DRAFT_0994 at 1027.850 kb on - strand, within B158DRAFT_0994 at 1027.864 kb on + strand, within B158DRAFT_0994 at 1027.864 kb on + strand, within B158DRAFT_0994
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 1,025,728 - +0.7 1,025,730 + -1.0 1,025,730 + +0.3 1,025,730 + -1.1 1,025,738 - -0.9 1,025,780 - -0.6 1,025,780 - -1.0 1,025,813 + -0.8 1,025,838 + B158DRAFT_0992 0.12 -0.9 1,025,856 + B158DRAFT_0992 0.14 -0.4 1,025,861 + B158DRAFT_0992 0.15 +0.3 1,025,869 - B158DRAFT_0992 0.15 -1.4 1,025,878 + B158DRAFT_0992 0.16 -1.7 1,025,917 + B158DRAFT_0992 0.20 -0.7 1,025,917 + B158DRAFT_0992 0.20 -0.9 1,025,925 - B158DRAFT_0992 0.21 +0.7 1,025,925 - B158DRAFT_0992 0.21 -0.6 1,025,925 - B158DRAFT_0992 0.21 -1.3 1,025,925 - B158DRAFT_0992 0.21 -0.4 1,025,925 - B158DRAFT_0992 0.21 -1.6 1,025,925 - B158DRAFT_0992 0.21 -0.3 1,025,925 - B158DRAFT_0992 0.21 -1.5 1,025,932 - B158DRAFT_0992 0.22 +0.0 1,025,954 - B158DRAFT_0992 0.24 +1.6 1,026,159 - B158DRAFT_0992 0.46 -0.7 1,026,166 - B158DRAFT_0992 0.46 -1.2 1,026,210 - B158DRAFT_0992 0.51 -1.7 1,026,288 - B158DRAFT_0992 0.59 -0.7 1,026,296 + B158DRAFT_0992 0.60 -0.0 1,026,296 + B158DRAFT_0992 0.60 -1.0 1,026,296 + B158DRAFT_0992 0.60 -1.7 1,026,296 + B158DRAFT_0992 0.60 -0.7 1,026,296 + B158DRAFT_0992 0.60 -1.6 1,026,304 - B158DRAFT_0992 0.61 +0.7 1,026,304 - B158DRAFT_0992 0.61 -0.4 1,026,304 - B158DRAFT_0992 0.61 -0.7 1,026,309 - B158DRAFT_0992 0.61 -0.6 1,026,413 + B158DRAFT_0992 0.72 -1.8 1,026,415 + B158DRAFT_0992 0.73 -0.7 1,026,421 - B158DRAFT_0992 0.73 -1.5 1,026,432 + B158DRAFT_0992 0.74 -1.5 1,026,440 - B158DRAFT_0992 0.75 -1.0 1,026,461 + B158DRAFT_0992 0.77 -2.7 1,026,471 + B158DRAFT_0992 0.78 -0.7 1,026,479 - B158DRAFT_0992 0.79 +0.7 1,026,479 - B158DRAFT_0992 0.79 +2.3 1,026,479 - B158DRAFT_0992 0.79 -0.6 1,026,479 - B158DRAFT_0992 0.79 -1.2 1,026,551 + B158DRAFT_0992 0.87 -0.3 1,026,559 - B158DRAFT_0992 0.88 -0.7 1,026,561 + B158DRAFT_0992 0.88 -1.3 1,026,569 - B158DRAFT_0992 0.89 -0.7 1,026,602 - -2.5 1,026,625 + -0.5 1,026,647 + +0.3 1,026,647 + -1.8 1,026,647 + -1.1 1,026,655 - +1.0 1,026,680 - -0.0 1,026,690 + -2.3 1,026,697 + -1.5 1,026,745 + B158DRAFT_0993 0.21 -0.3 1,026,782 - B158DRAFT_0993 0.41 -2.0 1,026,784 - B158DRAFT_0993 0.42 -2.1 1,026,825 + B158DRAFT_0993 0.65 -1.0 1,026,836 + B158DRAFT_0993 0.71 +0.1 1,026,857 + B158DRAFT_0993 0.83 -0.3 1,026,935 + -0.4 1,026,943 - -0.7 1,026,996 - +0.7 1,027,013 + +0.9 1,027,075 + -1.1 1,027,204 - -0.1 1,027,254 + -0.3 1,027,262 - -0.4 1,027,262 - -2.1 1,027,262 - +1.6 1,027,342 - +0.5 1,027,444 + B158DRAFT_0994 0.11 +0.3 1,027,508 + B158DRAFT_0994 0.14 +1.6 1,027,530 - B158DRAFT_0994 0.15 -0.5 1,027,530 - B158DRAFT_0994 0.15 +0.2 1,027,536 + B158DRAFT_0994 0.15 -1.1 1,027,536 + B158DRAFT_0994 0.15 -0.3 1,027,631 + B158DRAFT_0994 0.20 +0.1 1,027,631 + B158DRAFT_0994 0.20 +0.0 1,027,631 + B158DRAFT_0994 0.20 -1.2 1,027,648 + B158DRAFT_0994 0.21 -0.9 1,027,648 + B158DRAFT_0994 0.21 -1.6 1,027,648 + B158DRAFT_0994 0.21 -0.1 1,027,678 + B158DRAFT_0994 0.23 -1.1 1,027,678 + B158DRAFT_0994 0.23 -1.1 1,027,686 - B158DRAFT_0994 0.23 -1.4 1,027,717 + B158DRAFT_0994 0.25 -1.7 1,027,741 + B158DRAFT_0994 0.26 -2.6 1,027,751 + B158DRAFT_0994 0.27 -1.4 1,027,751 + B158DRAFT_0994 0.27 -0.1 1,027,751 + B158DRAFT_0994 0.27 -0.8 1,027,751 + B158DRAFT_0994 0.27 -0.8 1,027,751 + B158DRAFT_0994 0.27 +0.3 1,027,751 + B158DRAFT_0994 0.27 -0.9 1,027,751 + B158DRAFT_0994 0.27 +1.2 1,027,751 + B158DRAFT_0994 0.27 -0.5 1,027,751 + B158DRAFT_0994 0.27 -0.2 1,027,751 + B158DRAFT_0994 0.27 -1.3 1,027,751 + B158DRAFT_0994 0.27 -0.9 1,027,759 - B158DRAFT_0994 0.27 +1.2 1,027,759 - B158DRAFT_0994 0.27 -0.8 1,027,759 - B158DRAFT_0994 0.27 +1.6 1,027,759 - B158DRAFT_0994 0.27 +0.5 1,027,759 - B158DRAFT_0994 0.27 +0.0 1,027,759 - B158DRAFT_0994 0.27 -1.0 1,027,759 - B158DRAFT_0994 0.27 -0.4 1,027,759 - B158DRAFT_0994 0.27 -1.0 1,027,759 - B158DRAFT_0994 0.27 -0.5 1,027,759 - B158DRAFT_0994 0.27 -1.3 1,027,834 + B158DRAFT_0994 0.31 -0.3 1,027,850 - B158DRAFT_0994 0.32 +4.2 1,027,864 + B158DRAFT_0994 0.32 -0.6 1,027,864 + B158DRAFT_0994 0.32 -0.3
Or see this region's nucleotide sequence