Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0950 and B158DRAFT_0951 are separated by 17 nucleotides B158DRAFT_0951 and B158DRAFT_0952 are separated by 6 nucleotides B158DRAFT_0952 and B158DRAFT_0953 overlap by 4 nucleotides
B158DRAFT_0950: B158DRAFT_0950 - ABC-type antimicrobial peptide transport system, ATPase component, at 978,498 to 979,211
_0950
B158DRAFT_0951: B158DRAFT_0951 - Cytochrome C', at 979,229 to 979,708
_0951
B158DRAFT_0952: B158DRAFT_0952 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 979,715 to 981,181
_0952
B158DRAFT_0953: B158DRAFT_0953 - K+-dependent Na+/Ca+ exchanger related-protein, at 981,178 to 982,146
_0953
Position (kb) 979
980
981
982 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 978.906 kb on + strand, within B158DRAFT_0950 at 978.906 kb on + strand, within B158DRAFT_0950 at 978.911 kb on + strand, within B158DRAFT_0950 at 978.925 kb on - strand, within B158DRAFT_0950 at 978.956 kb on + strand, within B158DRAFT_0950 at 979.018 kb on + strand, within B158DRAFT_0950 at 979.045 kb on + strand, within B158DRAFT_0950 at 979.193 kb on - strand at 979.198 kb on - strand at 979.198 kb on - strand at 979.225 kb on - strand at 979.320 kb on - strand, within B158DRAFT_0951 at 979.648 kb on + strand, within B158DRAFT_0951 at 979.792 kb on + strand at 979.869 kb on + strand, within B158DRAFT_0952 at 979.974 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.018 kb on - strand, within B158DRAFT_0952 at 980.018 kb on - strand, within B158DRAFT_0952 at 980.029 kb on + strand, within B158DRAFT_0952 at 980.187 kb on + strand, within B158DRAFT_0952 at 980.195 kb on - strand, within B158DRAFT_0952 at 980.210 kb on - strand, within B158DRAFT_0952 at 980.217 kb on + strand, within B158DRAFT_0952 at 980.244 kb on + strand, within B158DRAFT_0952 at 980.247 kb on - strand, within B158DRAFT_0952 at 980.279 kb on + strand, within B158DRAFT_0952 at 980.279 kb on + strand, within B158DRAFT_0952 at 980.306 kb on + strand, within B158DRAFT_0952 at 980.308 kb on + strand, within B158DRAFT_0952 at 980.316 kb on - strand, within B158DRAFT_0952 at 980.316 kb on - strand, within B158DRAFT_0952 at 980.328 kb on + strand, within B158DRAFT_0952 at 980.422 kb on + strand, within B158DRAFT_0952 at 980.585 kb on - strand, within B158DRAFT_0952 at 980.619 kb on - strand, within B158DRAFT_0952 at 980.961 kb on + strand, within B158DRAFT_0952 at 980.966 kb on + strand, within B158DRAFT_0952 at 980.999 kb on - strand, within B158DRAFT_0952 at 981.045 kb on - strand at 981.069 kb on + strand at 981.106 kb on + strand at 981.106 kb on + strand at 981.106 kb on + strand at 981.114 kb on - strand at 981.114 kb on - strand at 981.114 kb on - strand at 981.170 kb on - strand at 981.204 kb on - strand at 981.217 kb on + strand at 981.270 kb on - strand at 981.304 kb on + strand, within B158DRAFT_0953 at 981.307 kb on + strand, within B158DRAFT_0953 at 981.312 kb on - strand, within B158DRAFT_0953 at 981.314 kb on + strand, within B158DRAFT_0953 at 981.314 kb on + strand, within B158DRAFT_0953 at 981.314 kb on + strand, within B158DRAFT_0953 at 981.314 kb on + strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.322 kb on - strand, within B158DRAFT_0953 at 981.349 kb on - strand, within B158DRAFT_0953 at 981.350 kb on - strand, within B158DRAFT_0953 at 981.398 kb on + strand, within B158DRAFT_0953 at 981.398 kb on - strand, within B158DRAFT_0953 at 981.406 kb on - strand, within B158DRAFT_0953 at 981.406 kb on - strand, within B158DRAFT_0953 at 981.408 kb on + strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.430 kb on - strand, within B158DRAFT_0953 at 981.446 kb on - strand, within B158DRAFT_0953 at 981.545 kb on - strand, within B158DRAFT_0953 at 981.545 kb on - strand, within B158DRAFT_0953 at 981.547 kb on - strand, within B158DRAFT_0953 at 981.547 kb on - strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.579 kb on + strand, within B158DRAFT_0953 at 981.579 kb on + strand, within B158DRAFT_0953 at 981.587 kb on - strand, within B158DRAFT_0953 at 981.617 kb on + strand, within B158DRAFT_0953 at 981.654 kb on - strand, within B158DRAFT_0953 at 981.727 kb on - strand, within B158DRAFT_0953 at 981.778 kb on + strand, within B158DRAFT_0953 at 981.812 kb on - strand, within B158DRAFT_0953 at 981.874 kb on + strand, within B158DRAFT_0953 at 981.882 kb on - strand, within B158DRAFT_0953 at 981.883 kb on + strand, within B158DRAFT_0953 at 981.929 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.942 kb on - strand, within B158DRAFT_0953 at 981.950 kb on + strand, within B158DRAFT_0953 at 981.950 kb on + strand, within B158DRAFT_0953 at 981.955 kb on + strand, within B158DRAFT_0953 at 981.958 kb on - strand, within B158DRAFT_0953 at 981.963 kb on - strand, within B158DRAFT_0953 at 981.963 kb on - strand, within B158DRAFT_0953 at 982.051 kb on - strand at 982.143 kb on + strand at 982.151 kb on - strand at 982.167 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 978,906 + B158DRAFT_0950 0.57 +0.1 978,906 + B158DRAFT_0950 0.57 +0.2 978,911 + B158DRAFT_0950 0.58 -0.9 978,925 - B158DRAFT_0950 0.60 -1.0 978,956 + B158DRAFT_0950 0.64 -1.1 979,018 + B158DRAFT_0950 0.73 -0.7 979,045 + B158DRAFT_0950 0.77 -1.3 979,193 - -1.6 979,198 - +0.6 979,198 - +0.1 979,225 - -0.4 979,320 - B158DRAFT_0951 0.19 +0.6 979,648 + B158DRAFT_0951 0.87 -0.6 979,792 + -1.4 979,869 + B158DRAFT_0952 0.10 -0.3 979,974 + B158DRAFT_0952 0.18 +0.9 980,010 + B158DRAFT_0952 0.20 -2.6 980,010 + B158DRAFT_0952 0.20 -1.1 980,010 + B158DRAFT_0952 0.20 +1.7 980,010 + B158DRAFT_0952 0.20 -0.5 980,018 - B158DRAFT_0952 0.21 -0.7 980,018 - B158DRAFT_0952 0.21 -1.6 980,029 + B158DRAFT_0952 0.21 -1.1 980,187 + B158DRAFT_0952 0.32 +1.6 980,195 - B158DRAFT_0952 0.33 +0.6 980,210 - B158DRAFT_0952 0.34 -0.9 980,217 + B158DRAFT_0952 0.34 +0.1 980,244 + B158DRAFT_0952 0.36 -0.8 980,247 - B158DRAFT_0952 0.36 -1.2 980,279 + B158DRAFT_0952 0.38 +0.9 980,279 + B158DRAFT_0952 0.38 -0.9 980,306 + B158DRAFT_0952 0.40 +1.0 980,308 + B158DRAFT_0952 0.40 -1.8 980,316 - B158DRAFT_0952 0.41 -1.3 980,316 - B158DRAFT_0952 0.41 -0.1 980,328 + B158DRAFT_0952 0.42 +0.8 980,422 + B158DRAFT_0952 0.48 -1.5 980,585 - B158DRAFT_0952 0.59 -0.0 980,619 - B158DRAFT_0952 0.62 -0.8 980,961 + B158DRAFT_0952 0.85 -0.3 980,966 + B158DRAFT_0952 0.85 +0.2 980,999 - B158DRAFT_0952 0.88 -0.1 981,045 - -1.9 981,069 + -1.3 981,106 + -0.6 981,106 + -0.4 981,106 + +0.9 981,114 - -0.2 981,114 - +2.3 981,114 - +0.2 981,170 - -0.3 981,204 - +0.1 981,217 + +0.5 981,270 - -1.1 981,304 + B158DRAFT_0953 0.13 -0.9 981,307 + B158DRAFT_0953 0.13 -1.1 981,312 - B158DRAFT_0953 0.14 -0.3 981,314 + B158DRAFT_0953 0.14 +0.4 981,314 + B158DRAFT_0953 0.14 +2.2 981,314 + B158DRAFT_0953 0.14 -2.2 981,314 + B158DRAFT_0953 0.14 -1.0 981,322 - B158DRAFT_0953 0.15 -2.3 981,322 - B158DRAFT_0953 0.15 -0.0 981,322 - B158DRAFT_0953 0.15 -0.0 981,322 - B158DRAFT_0953 0.15 -1.4 981,322 - B158DRAFT_0953 0.15 -0.4 981,322 - B158DRAFT_0953 0.15 +0.6 981,349 - B158DRAFT_0953 0.18 -0.8 981,350 - B158DRAFT_0953 0.18 -1.4 981,398 + B158DRAFT_0953 0.23 -0.1 981,398 - B158DRAFT_0953 0.23 -1.3 981,406 - B158DRAFT_0953 0.24 +0.4 981,406 - B158DRAFT_0953 0.24 +0.4 981,408 + B158DRAFT_0953 0.24 +0.0 981,416 - B158DRAFT_0953 0.25 +1.2 981,416 - B158DRAFT_0953 0.25 -0.2 981,416 - B158DRAFT_0953 0.25 +7.0 981,416 - B158DRAFT_0953 0.25 +0.5 981,430 - B158DRAFT_0953 0.26 +0.3 981,446 - B158DRAFT_0953 0.28 -1.0 981,545 - B158DRAFT_0953 0.38 +0.4 981,545 - B158DRAFT_0953 0.38 +0.4 981,547 - B158DRAFT_0953 0.38 -0.4 981,547 - B158DRAFT_0953 0.38 -0.4 981,566 + B158DRAFT_0953 0.40 -1.0 981,566 + B158DRAFT_0953 0.40 -0.1 981,566 + B158DRAFT_0953 0.40 -0.3 981,566 + B158DRAFT_0953 0.40 -0.3 981,566 + B158DRAFT_0953 0.40 -0.2 981,579 + B158DRAFT_0953 0.41 -2.3 981,579 + B158DRAFT_0953 0.41 +0.4 981,587 - B158DRAFT_0953 0.42 -0.8 981,617 + B158DRAFT_0953 0.45 -1.4 981,654 - B158DRAFT_0953 0.49 -0.4 981,727 - B158DRAFT_0953 0.57 -2.5 981,778 + B158DRAFT_0953 0.62 -1.2 981,812 - B158DRAFT_0953 0.65 +2.3 981,874 + B158DRAFT_0953 0.72 -0.2 981,882 - B158DRAFT_0953 0.73 -2.9 981,883 + B158DRAFT_0953 0.73 -0.8 981,929 + B158DRAFT_0953 0.78 +2.3 981,934 + B158DRAFT_0953 0.78 -1.3 981,934 + B158DRAFT_0953 0.78 -0.7 981,934 + B158DRAFT_0953 0.78 -0.4 981,942 - B158DRAFT_0953 0.79 -0.8 981,950 + B158DRAFT_0953 0.80 -0.1 981,950 + B158DRAFT_0953 0.80 +0.2 981,955 + B158DRAFT_0953 0.80 -0.8 981,958 - B158DRAFT_0953 0.80 +2.6 981,963 - B158DRAFT_0953 0.81 -0.0 981,963 - B158DRAFT_0953 0.81 -0.8 982,051 - -0.9 982,143 + -1.2 982,151 - +0.2 982,167 - +2.4
Or see this region's nucleotide sequence