Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0903

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0902 and B158DRAFT_0903 are separated by 181 nucleotidesB158DRAFT_0903 and B158DRAFT_0904 are separated by 156 nucleotides B158DRAFT_0902: B158DRAFT_0902 - phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1), at 926,592 to 927,548 _0902 B158DRAFT_0903: B158DRAFT_0903 - hypothetical protein, at 927,730 to 928,125 _0903 B158DRAFT_0904: B158DRAFT_0904 - 1-aminocyclopropane-1-carboxylate deaminase, at 928,282 to 929,145 _0904 Position (kb) 927 928 929Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 926.731 kb on - strand, within B158DRAFT_0902at 926.735 kb on - strand, within B158DRAFT_0902at 926.771 kb on + strand, within B158DRAFT_0902at 926.771 kb on + strand, within B158DRAFT_0902at 926.771 kb on + strand, within B158DRAFT_0902at 926.779 kb on - strand, within B158DRAFT_0902at 926.786 kb on - strand, within B158DRAFT_0902at 926.923 kb on + strand, within B158DRAFT_0902at 926.994 kb on - strand, within B158DRAFT_0902at 927.022 kb on - strand, within B158DRAFT_0902at 927.052 kb on - strand, within B158DRAFT_0902at 927.075 kb on + strand, within B158DRAFT_0902at 927.076 kb on + strand, within B158DRAFT_0902at 927.083 kb on - strand, within B158DRAFT_0902at 927.084 kb on - strand, within B158DRAFT_0902at 927.089 kb on - strand, within B158DRAFT_0902at 927.143 kb on - strand, within B158DRAFT_0902at 927.289 kb on + strand, within B158DRAFT_0902at 927.692 kb on + strandat 927.814 kb on - strand, within B158DRAFT_0903at 927.816 kb on + strand, within B158DRAFT_0903at 927.824 kb on - strand, within B158DRAFT_0903at 927.840 kb on + strand, within B158DRAFT_0903at 927.848 kb on + strand, within B158DRAFT_0903at 927.856 kb on - strand, within B158DRAFT_0903at 927.931 kb on - strand, within B158DRAFT_0903at 927.938 kb on + strand, within B158DRAFT_0903at 927.938 kb on + strand, within B158DRAFT_0903at 927.946 kb on - strand, within B158DRAFT_0903at 927.946 kb on - strand, within B158DRAFT_0903at 927.946 kb on - strand, within B158DRAFT_0903at 927.946 kb on - strand, within B158DRAFT_0903at 927.946 kb on - strand, within B158DRAFT_0903at 928.133 kb on - strandat 928.201 kb on + strandat 928.201 kb on + strandat 928.209 kb on - strandat 928.209 kb on - strandat 928.209 kb on - strandat 928.346 kb on - strandat 928.388 kb on - strand, within B158DRAFT_0904at 928.516 kb on + strand, within B158DRAFT_0904at 928.620 kb on - strand, within B158DRAFT_0904at 928.637 kb on - strand, within B158DRAFT_0904at 928.829 kb on - strand, within B158DRAFT_0904at 928.886 kb on - strand, within B158DRAFT_0904at 928.893 kb on + strand, within B158DRAFT_0904at 928.893 kb on + strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.913 kb on - strand, within B158DRAFT_0904at 928.973 kb on - strand, within B158DRAFT_0904

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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926,731 - B158DRAFT_0902 0.15 -0.4
926,735 - B158DRAFT_0902 0.15 -0.5
926,771 + B158DRAFT_0902 0.19 -0.4
926,771 + B158DRAFT_0902 0.19 +0.6
926,771 + B158DRAFT_0902 0.19 +0.7
926,779 - B158DRAFT_0902 0.20 -0.6
926,786 - B158DRAFT_0902 0.20 -1.8
926,923 + B158DRAFT_0902 0.35 +0.6
926,994 - B158DRAFT_0902 0.42 +0.4
927,022 - B158DRAFT_0902 0.45 -0.5
927,052 - B158DRAFT_0902 0.48 +1.9
927,075 + B158DRAFT_0902 0.50 +0.9
927,076 + B158DRAFT_0902 0.51 -1.6
927,083 - B158DRAFT_0902 0.51 -1.6
927,084 - B158DRAFT_0902 0.51 -1.4
927,089 - B158DRAFT_0902 0.52 +0.4
927,143 - B158DRAFT_0902 0.58 -0.5
927,289 + B158DRAFT_0902 0.73 +1.3
927,692 + +0.2
927,814 - B158DRAFT_0903 0.21 -1.8
927,816 + B158DRAFT_0903 0.22 -1.3
927,824 - B158DRAFT_0903 0.24 -0.4
927,840 + B158DRAFT_0903 0.28 -0.3
927,848 + B158DRAFT_0903 0.30 -0.6
927,856 - B158DRAFT_0903 0.32 -0.1
927,931 - B158DRAFT_0903 0.51 -0.5
927,938 + B158DRAFT_0903 0.53 -0.1
927,938 + B158DRAFT_0903 0.53 +1.6
927,946 - B158DRAFT_0903 0.55 +0.3
927,946 - B158DRAFT_0903 0.55 +0.3
927,946 - B158DRAFT_0903 0.55 -0.2
927,946 - B158DRAFT_0903 0.55 -0.8
927,946 - B158DRAFT_0903 0.55 -0.4
928,133 - -2.3
928,201 + +3.8
928,201 + -0.2
928,209 - +0.1
928,209 - +0.3
928,209 - +0.9
928,346 - -1.8
928,388 - B158DRAFT_0904 0.12 -2.5
928,516 + B158DRAFT_0904 0.27 +0.5
928,620 - B158DRAFT_0904 0.39 +0.9
928,637 - B158DRAFT_0904 0.41 -0.6
928,829 - B158DRAFT_0904 0.63 -0.1
928,886 - B158DRAFT_0904 0.70 -0.5
928,893 + B158DRAFT_0904 0.71 -2.1
928,893 + B158DRAFT_0904 0.71 +0.9
928,901 - B158DRAFT_0904 0.72 -1.9
928,901 - B158DRAFT_0904 0.72 -0.7
928,901 - B158DRAFT_0904 0.72 -2.1
928,913 - B158DRAFT_0904 0.73 +0.5
928,973 - B158DRAFT_0904 0.80 -1.5

Or see this region's nucleotide sequence