Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0833

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0831 and B158DRAFT_0832 overlap by 4 nucleotidesB158DRAFT_0832 and B158DRAFT_0833 are separated by 359 nucleotidesB158DRAFT_0833 and B158DRAFT_0834 overlap by 27 nucleotides B158DRAFT_0831: B158DRAFT_0831 - Uncharacterized conserved protein, at 841,584 to 842,798 _0831 B158DRAFT_0832: B158DRAFT_0832 - hypothetical protein, at 842,795 to 843,058 _0832 B158DRAFT_0833: B158DRAFT_0833 - undecaprenyl-diphosphatase UppP, at 843,418 to 844,242 _0833 B158DRAFT_0834: B158DRAFT_0834 - tRNA nucleotidyltransferase/poly(A) polymerase, at 844,216 to 845,451 _0834 Position (kb) 843 844 845Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 842.431 kb on + strand, within B158DRAFT_0831at 842.443 kb on + strand, within B158DRAFT_0831at 842.446 kb on + strand, within B158DRAFT_0831at 842.446 kb on + strand, within B158DRAFT_0831at 842.449 kb on - strand, within B158DRAFT_0831at 842.449 kb on - strand, within B158DRAFT_0831at 842.451 kb on - strand, within B158DRAFT_0831at 842.451 kb on - strand, within B158DRAFT_0831at 842.451 kb on - strand, within B158DRAFT_0831at 842.454 kb on - strand, within B158DRAFT_0831at 842.463 kb on + strand, within B158DRAFT_0831at 842.463 kb on + strand, within B158DRAFT_0831at 842.464 kb on - strand, within B158DRAFT_0831at 842.471 kb on - strand, within B158DRAFT_0831at 842.473 kb on - strand, within B158DRAFT_0831at 842.569 kb on + strand, within B158DRAFT_0831at 842.569 kb on + strand, within B158DRAFT_0831at 842.577 kb on - strand, within B158DRAFT_0831at 842.610 kb on - strand, within B158DRAFT_0831at 842.610 kb on - strand, within B158DRAFT_0831at 842.617 kb on + strand, within B158DRAFT_0831at 842.625 kb on - strand, within B158DRAFT_0831at 842.636 kb on + strand, within B158DRAFT_0831at 842.636 kb on + strand, within B158DRAFT_0831at 842.644 kb on - strand, within B158DRAFT_0831at 842.695 kb on + strandat 842.695 kb on + strandat 842.724 kb on + strandat 842.764 kb on + strandat 842.828 kb on + strand, within B158DRAFT_0832at 842.903 kb on + strand, within B158DRAFT_0832at 842.903 kb on + strand, within B158DRAFT_0832at 843.044 kb on + strandat 843.342 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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842,431 + B158DRAFT_0831 0.70 +0.7
842,443 + B158DRAFT_0831 0.71 +0.3
842,446 + B158DRAFT_0831 0.71 -0.5
842,446 + B158DRAFT_0831 0.71 -0.6
842,449 - B158DRAFT_0831 0.71 -0.1
842,449 - B158DRAFT_0831 0.71 +8.1
842,451 - B158DRAFT_0831 0.71 -1.1
842,451 - B158DRAFT_0831 0.71 +0.8
842,451 - B158DRAFT_0831 0.71 -0.5
842,454 - B158DRAFT_0831 0.72 -1.2
842,463 + B158DRAFT_0831 0.72 -0.7
842,463 + B158DRAFT_0831 0.72 +0.9
842,464 - B158DRAFT_0831 0.72 -0.6
842,471 - B158DRAFT_0831 0.73 -2.4
842,473 - B158DRAFT_0831 0.73 +2.0
842,569 + B158DRAFT_0831 0.81 -1.9
842,569 + B158DRAFT_0831 0.81 -0.6
842,577 - B158DRAFT_0831 0.82 -0.0
842,610 - B158DRAFT_0831 0.84 +2.3
842,610 - B158DRAFT_0831 0.84 -1.5
842,617 + B158DRAFT_0831 0.85 -0.4
842,625 - B158DRAFT_0831 0.86 -1.2
842,636 + B158DRAFT_0831 0.87 +0.3
842,636 + B158DRAFT_0831 0.87 +1.1
842,644 - B158DRAFT_0831 0.87 +1.0
842,695 + -0.0
842,695 + -0.3
842,724 + -0.4
842,764 + -1.2
842,828 + B158DRAFT_0832 0.12 +1.3
842,903 + B158DRAFT_0832 0.41 -0.1
842,903 + B158DRAFT_0832 0.41 -0.1
843,044 + -0.3
843,342 + +1.9

Or see this region's nucleotide sequence