Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0772

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0770 and B158DRAFT_0771 are separated by 44 nucleotidesB158DRAFT_0771 and B158DRAFT_0772 are separated by 105 nucleotidesB158DRAFT_0772 and B158DRAFT_0773 are separated by 59 nucleotidesB158DRAFT_0773 and B158DRAFT_0774 are separated by 106 nucleotides B158DRAFT_0770: B158DRAFT_0770 - Choline dehydrogenase and related flavoproteins, at 777,281 to 778,831 _0770 B158DRAFT_0771: B158DRAFT_0771 - Phosphopantetheine adenylyltransferase (EC 2.7.7.3), at 778,876 to 779,358 _0771 B158DRAFT_0772: B158DRAFT_0772 - Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I), at 779,464 to 779,724 _0772 B158DRAFT_0773: B158DRAFT_0773 - Predicted esterase of the alpha-beta hydrolase superfamily, at 779,784 to 780,548 _0773 B158DRAFT_0774: B158DRAFT_0774 - Predicted Fe-S-cluster oxidoreductase, at 780,655 to 781,032 _0774 Position (kb) 779 780Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 778.480 kb on + strand, within B158DRAFT_0770at 778.520 kb on - strand, within B158DRAFT_0770at 778.570 kb on + strand, within B158DRAFT_0770at 778.655 kb on - strand, within B158DRAFT_0770at 778.722 kb on - strandat 778.811 kb on + strandat 779.362 kb on - strandat 779.387 kb on + strandat 779.395 kb on - strandat 779.395 kb on - strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.730 kb on + strandat 779.741 kb on + strandat 779.741 kb on + strandat 779.742 kb on + strandat 779.749 kb on - strandat 779.749 kb on - strandat 779.786 kb on + strandat 779.786 kb on + strandat 779.798 kb on + strandat 779.807 kb on + strandat 779.823 kb on + strandat 779.835 kb on + strandat 779.843 kb on - strandat 779.878 kb on - strand, within B158DRAFT_0773at 779.925 kb on + strand, within B158DRAFT_0773at 779.933 kb on - strand, within B158DRAFT_0773at 779.959 kb on + strand, within B158DRAFT_0773at 779.974 kb on + strand, within B158DRAFT_0773at 780.029 kb on + strand, within B158DRAFT_0773at 780.037 kb on - strand, within B158DRAFT_0773at 780.039 kb on + strand, within B158DRAFT_0773at 780.039 kb on + strand, within B158DRAFT_0773at 780.044 kb on + strand, within B158DRAFT_0773at 780.123 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.131 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.278 kb on + strand, within B158DRAFT_0773at 780.281 kb on - strand, within B158DRAFT_0773at 780.303 kb on - strand, within B158DRAFT_0773at 780.346 kb on + strand, within B158DRAFT_0773at 780.373 kb on - strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.473 kb on - strandat 780.479 kb on + strandat 780.485 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.503 kb on + strandat 780.503 kb on + strandat 780.511 kb on - strandat 780.561 kb on + strandat 780.569 kb on - strandat 780.619 kb on + strandat 780.635 kb on - strandat 780.647 kb on + strandat 780.674 kb on - strandat 780.698 kb on + strand, within B158DRAFT_0774at 780.698 kb on + strand, within B158DRAFT_0774

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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778,480 + B158DRAFT_0770 0.77 -0.3
778,520 - B158DRAFT_0770 0.80 -1.4
778,570 + B158DRAFT_0770 0.83 +1.2
778,655 - B158DRAFT_0770 0.89 -0.1
778,722 - +2.1
778,811 + -0.3
779,362 - -0.3
779,387 + +0.0
779,395 - -0.1
779,395 - -1.1
779,720 + +1.6
779,720 + +0.4
779,720 + -1.3
779,728 - -0.0
779,728 - -1.0
779,728 - -1.3
779,728 - -0.9
779,730 + -0.0
779,741 + +1.6
779,741 + +1.4
779,742 + -1.2
779,749 - -1.2
779,749 - -1.2
779,786 + +1.6
779,786 + +1.8
779,798 + -1.9
779,807 + +0.7
779,823 + -0.5
779,835 + +0.4
779,843 - +1.6
779,878 - B158DRAFT_0773 0.12 -1.2
779,925 + B158DRAFT_0773 0.18 +0.2
779,933 - B158DRAFT_0773 0.19 -0.3
779,959 + B158DRAFT_0773 0.23 -1.2
779,974 + B158DRAFT_0773 0.25 -1.8
780,029 + B158DRAFT_0773 0.32 -0.1
780,037 - B158DRAFT_0773 0.33 -1.2
780,039 + B158DRAFT_0773 0.33 +0.7
780,039 + B158DRAFT_0773 0.33 +3.0
780,044 + B158DRAFT_0773 0.34 +0.2
780,123 + B158DRAFT_0773 0.44 +0.2
780,128 + B158DRAFT_0773 0.45 -0.8
780,128 + B158DRAFT_0773 0.45 +3.0
780,131 - B158DRAFT_0773 0.45 -0.9
780,136 - B158DRAFT_0773 0.46 -0.5
780,136 - B158DRAFT_0773 0.46 +1.6
780,171 - B158DRAFT_0773 0.51 -0.5
780,171 - B158DRAFT_0773 0.51 -0.5
780,188 + B158DRAFT_0773 0.53 +1.8
780,188 + B158DRAFT_0773 0.53 -0.8
780,233 + B158DRAFT_0773 0.59 +0.1
780,233 + B158DRAFT_0773 0.59 -1.3
780,278 + B158DRAFT_0773 0.65 -1.0
780,281 - B158DRAFT_0773 0.65 +2.3
780,303 - B158DRAFT_0773 0.68 -1.0
780,346 + B158DRAFT_0773 0.73 +0.2
780,373 - B158DRAFT_0773 0.77 -0.6
780,430 + B158DRAFT_0773 0.84 -0.1
780,430 + B158DRAFT_0773 0.84 -0.5
780,473 - -0.3
780,479 + -0.4
780,485 - -1.4
780,497 - +0.3
780,497 - -2.6
780,497 - -1.8
780,497 - +2.1
780,497 - -0.1
780,503 + -1.1
780,503 + +1.2
780,511 - +6.4
780,561 + +0.8
780,569 - -0.5
780,619 + -0.9
780,635 - +0.1
780,647 + -0.7
780,674 - -0.1
780,698 + B158DRAFT_0774 0.11 -0.3
780,698 + B158DRAFT_0774 0.11 -0.8

Or see this region's nucleotide sequence