Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0635

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0633 and B158DRAFT_0634 are separated by 59 nucleotidesB158DRAFT_0634 and B158DRAFT_0635 are separated by 147 nucleotidesB158DRAFT_0635 and B158DRAFT_0636 are separated by 51 nucleotidesB158DRAFT_0636 and B158DRAFT_0637 are separated by 23 nucleotides B158DRAFT_0633: B158DRAFT_0633 - putative RNA-binding protein, YhbY family, at 641,703 to 642,032 _0633 B158DRAFT_0634: B158DRAFT_0634 - 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166), at 642,092 to 642,712 _0634 B158DRAFT_0635: B158DRAFT_0635 - ATP-dependent metalloprotease FtsH, at 642,860 to 644,785 _0635 B158DRAFT_0636: B158DRAFT_0636 - Dihydropteroate synthase (EC 2.5.1.15), at 644,837 to 645,652 _0636 B158DRAFT_0637: B158DRAFT_0637 - phosphoglucosamine mutase (EC 5.4.2.10), at 645,676 to 647,016 _0637 Position (kb) 642 643 644 645Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 641.914 kb on - strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.954 kb on - strand, within B158DRAFT_0633at 641.985 kb on + strand, within B158DRAFT_0633at 642.115 kb on + strandat 642.195 kb on + strand, within B158DRAFT_0634at 642.195 kb on + strand, within B158DRAFT_0634at 642.237 kb on + strand, within B158DRAFT_0634at 642.245 kb on + strand, within B158DRAFT_0634at 642.261 kb on - strand, within B158DRAFT_0634at 642.290 kb on + strand, within B158DRAFT_0634at 642.290 kb on + strand, within B158DRAFT_0634at 642.310 kb on + strand, within B158DRAFT_0634at 642.371 kb on - strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.427 kb on + strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.435 kb on - strand, within B158DRAFT_0634at 642.440 kb on - strand, within B158DRAFT_0634at 642.493 kb on + strand, within B158DRAFT_0634at 642.493 kb on + strand, within B158DRAFT_0634at 642.501 kb on - strand, within B158DRAFT_0634at 642.521 kb on + strand, within B158DRAFT_0634at 642.532 kb on + strand, within B158DRAFT_0634at 642.540 kb on - strand, within B158DRAFT_0634at 642.607 kb on - strand, within B158DRAFT_0634at 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.706 kb on + strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.714 kb on - strandat 642.747 kb on - strandat 643.192 kb on + strand, within B158DRAFT_0635at 643.754 kb on + strandat 643.776 kb on + strand, within B158DRAFT_0635at 644.064 kb on + strand, within B158DRAFT_0635at 644.076 kb on + strand, within B158DRAFT_0635at 644.104 kb on + strand, within B158DRAFT_0635at 644.184 kb on + strand, within B158DRAFT_0635at 644.465 kb on + strand, within B158DRAFT_0635at 644.664 kb on + strandat 644.711 kb on + strandat 645.633 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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641,914 - B158DRAFT_0633 0.64 -0.3
641,946 + B158DRAFT_0633 0.74 +2.3
641,946 + B158DRAFT_0633 0.74 -1.4
641,946 + B158DRAFT_0633 0.74 +0.7
641,954 - B158DRAFT_0633 0.76 +0.1
641,985 + B158DRAFT_0633 0.85 -0.8
642,115 + +0.6
642,195 + B158DRAFT_0634 0.17 -0.5
642,195 + B158DRAFT_0634 0.17 +0.5
642,237 + B158DRAFT_0634 0.23 +0.2
642,245 + B158DRAFT_0634 0.25 -2.3
642,261 - B158DRAFT_0634 0.27 +0.1
642,290 + B158DRAFT_0634 0.32 -0.9
642,290 + B158DRAFT_0634 0.32 -1.8
642,310 + B158DRAFT_0634 0.35 +0.0
642,371 - B158DRAFT_0634 0.45 -0.3
642,427 + B158DRAFT_0634 0.54 -1.1
642,427 + B158DRAFT_0634 0.54 +1.0
642,427 + B158DRAFT_0634 0.54 -1.5
642,427 + B158DRAFT_0634 0.54 +3.3
642,427 + B158DRAFT_0634 0.54 -1.1
642,435 - B158DRAFT_0634 0.55 +0.3
642,435 - B158DRAFT_0634 0.55 +0.8
642,435 - B158DRAFT_0634 0.55 +0.2
642,435 - B158DRAFT_0634 0.55 +0.3
642,435 - B158DRAFT_0634 0.55 -1.2
642,435 - B158DRAFT_0634 0.55 -1.2
642,435 - B158DRAFT_0634 0.55 -1.0
642,440 - B158DRAFT_0634 0.56 -1.5
642,493 + B158DRAFT_0634 0.65 -1.4
642,493 + B158DRAFT_0634 0.65 -1.4
642,501 - B158DRAFT_0634 0.66 -0.4
642,521 + B158DRAFT_0634 0.69 -0.4
642,532 + B158DRAFT_0634 0.71 +0.8
642,540 - B158DRAFT_0634 0.72 +0.2
642,607 - B158DRAFT_0634 0.83 -1.0
642,706 + -1.2
642,706 + -2.4
642,706 + -0.7
642,706 + -0.4
642,706 + +0.3
642,714 - -0.5
642,714 - +1.1
642,714 - -1.0
642,714 - -0.6
642,747 - +1.8
643,192 + B158DRAFT_0635 0.17 +3.3
643,754 + +4.9
643,776 + B158DRAFT_0635 0.48 +2.3
644,064 + B158DRAFT_0635 0.63 +1.9
644,076 + B158DRAFT_0635 0.63 +0.8
644,104 + B158DRAFT_0635 0.65 +2.1
644,184 + B158DRAFT_0635 0.69 +0.5
644,465 + B158DRAFT_0635 0.83 +0.4
644,664 + -0.6
644,711 + -0.8
645,633 + -0.5

Or see this region's nucleotide sequence