Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0543 and B158DRAFT_0544 are separated by 130 nucleotides B158DRAFT_0544 and B158DRAFT_0545 are separated by 305 nucleotides B158DRAFT_0545 and B158DRAFT_0546 are separated by 68 nucleotides B158DRAFT_0546 and B158DRAFT_0547 are separated by 69 nucleotides
B158DRAFT_0543: B158DRAFT_0543 - glycine cleavage system T protein, at 548,728 to 549,816
_0543
B158DRAFT_0544: B158DRAFT_0544 - glycine cleavage system H protein, at 549,947 to 550,336
_0544
B158DRAFT_0545: B158DRAFT_0545 - glycine dehydrogenase (decarboxylating), at 550,642 to 553,527
_0545
B158DRAFT_0546: B158DRAFT_0546 - Tetrapyrrole (Corrin/Porphyrin) Methylases., at 553,596 to 554,396
_0546
B158DRAFT_0547: B158DRAFT_0547 - Aromatic-ring-opening dioxygenase LigAB, LigA subunit., at 554,466 to 554,687
_0547
Position (kb) 550
551
552
553
554 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 549.780 kb on + strand at 549.810 kb on + strand at 549.810 kb on + strand at 549.834 kb on - strand at 550.227 kb on - strand, within B158DRAFT_0544 at 550.324 kb on - strand at 553.529 kb on - strand at 553.619 kb on - strand at 553.650 kb on + strand at 553.698 kb on + strand, within B158DRAFT_0546 at 553.744 kb on + strand, within B158DRAFT_0546 at 553.752 kb on - strand, within B158DRAFT_0546 at 553.850 kb on + strand, within B158DRAFT_0546 at 553.858 kb on - strand, within B158DRAFT_0546 at 553.952 kb on + strand, within B158DRAFT_0546 at 554.022 kb on + strand, within B158DRAFT_0546 at 554.130 kb on - strand, within B158DRAFT_0546 at 554.152 kb on + strand, within B158DRAFT_0546 at 554.243 kb on + strand, within B158DRAFT_0546 at 554.251 kb on - strand, within B158DRAFT_0546 at 554.251 kb on - strand, within B158DRAFT_0546 at 554.321 kb on + strand at 554.396 kb on - strand at 554.526 kb on - strand, within B158DRAFT_0547
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 549,780 + +1.1 549,810 + +1.3 549,810 + -0.2 549,834 - +0.2 550,227 - B158DRAFT_0544 0.72 +3.6 550,324 - +1.3 553,529 - -1.4 553,619 - -0.4 553,650 + +1.0 553,698 + B158DRAFT_0546 0.13 +2.0 553,744 + B158DRAFT_0546 0.18 +1.6 553,752 - B158DRAFT_0546 0.19 -0.5 553,850 + B158DRAFT_0546 0.32 +0.6 553,858 - B158DRAFT_0546 0.33 -0.6 553,952 + B158DRAFT_0546 0.44 +0.3 554,022 + B158DRAFT_0546 0.53 -0.1 554,130 - B158DRAFT_0546 0.67 -0.4 554,152 + B158DRAFT_0546 0.69 -1.0 554,243 + B158DRAFT_0546 0.81 -0.7 554,251 - B158DRAFT_0546 0.82 -1.3 554,251 - B158DRAFT_0546 0.82 -1.1 554,321 + -2.6 554,396 - -0.8 554,526 - B158DRAFT_0547 0.27 +0.1
Or see this region's nucleotide sequence