Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0441

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0440 and B158DRAFT_0441 overlap by 8 nucleotidesB158DRAFT_0441 and B158DRAFT_0442 are separated by 17 nucleotides B158DRAFT_0440: B158DRAFT_0440 - Cell division protein, at 442,242 to 443,210 _0440 B158DRAFT_0441: B158DRAFT_0441 - cell division ATP-binding protein FtsE, at 443,203 to 443,886 _0441 B158DRAFT_0442: B158DRAFT_0442 - signal recognition particle-docking protein FtsY, at 443,904 to 445,148 _0442 Position (kb) 443 444Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 442.234 kb on + strandat 442.256 kb on - strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.258 kb on + strandat 442.266 kb on - strandat 442.289 kb on - strandat 442.311 kb on + strandat 442.371 kb on + strand, within B158DRAFT_0440at 442.371 kb on + strand, within B158DRAFT_0440at 442.377 kb on - strand, within B158DRAFT_0440at 442.379 kb on - strand, within B158DRAFT_0440at 442.388 kb on + strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.396 kb on - strand, within B158DRAFT_0440at 442.443 kb on + strand, within B158DRAFT_0440at 442.455 kb on + strand, within B158DRAFT_0440at 442.511 kb on - strand, within B158DRAFT_0440at 442.513 kb on + strand, within B158DRAFT_0440at 442.551 kb on + strand, within B158DRAFT_0440at 442.551 kb on + strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.559 kb on - strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.775 kb on + strand, within B158DRAFT_0440at 442.783 kb on - strand, within B158DRAFT_0440at 442.808 kb on + strand, within B158DRAFT_0440at 442.812 kb on + strand, within B158DRAFT_0440at 442.820 kb on - strand, within B158DRAFT_0440at 442.850 kb on + strand, within B158DRAFT_0440at 442.885 kb on + strand, within B158DRAFT_0440at 442.953 kb on - strand, within B158DRAFT_0440at 443.037 kb on + strand, within B158DRAFT_0440at 443.042 kb on + strand, within B158DRAFT_0440at 443.042 kb on + strand, within B158DRAFT_0440at 443.042 kb on + strand, within B158DRAFT_0440at 443.043 kb on + strand, within B158DRAFT_0440at 443.043 kb on + strand, within B158DRAFT_0440at 443.051 kb on - strand, within B158DRAFT_0440at 443.051 kb on - strand, within B158DRAFT_0440at 443.051 kb on - strand, within B158DRAFT_0440at 443.138 kb on + strandat 443.138 kb on + strandat 443.138 kb on + strandat 443.138 kb on + strandat 443.138 kb on + strandat 443.138 kb on + strandat 443.138 kb on + strandat 443.146 kb on - strandat 443.146 kb on - strandat 443.146 kb on - strandat 443.146 kb on - strandat 443.148 kb on - strandat 443.261 kb on - strandat 443.300 kb on - strand, within B158DRAFT_0441at 443.422 kb on + strand, within B158DRAFT_0441at 443.473 kb on - strand, within B158DRAFT_0441at 443.516 kb on - strand, within B158DRAFT_0441at 443.526 kb on - strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.528 kb on + strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.536 kb on - strand, within B158DRAFT_0441at 443.573 kb on + strand, within B158DRAFT_0441at 443.675 kb on + strand, within B158DRAFT_0441at 443.675 kb on + strand, within B158DRAFT_0441at 443.675 kb on + strand, within B158DRAFT_0441at 443.683 kb on - strand, within B158DRAFT_0441at 443.747 kb on - strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.814 kb on + strand, within B158DRAFT_0441at 443.821 kb on + strandat 443.822 kb on - strandat 443.822 kb on - strandat 443.822 kb on - strandat 443.822 kb on - strandat 443.822 kb on - strandat 443.849 kb on + strandat 443.849 kb on + strandat 443.857 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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442,234 + -0.6
442,256 - -1.1
442,258 + -1.1
442,258 + -1.2
442,258 + -0.1
442,258 + -0.3
442,266 - -1.5
442,289 - -0.1
442,311 + -0.2
442,371 + B158DRAFT_0440 0.13 +0.5
442,371 + B158DRAFT_0440 0.13 +0.1
442,377 - B158DRAFT_0440 0.14 -0.4
442,379 - B158DRAFT_0440 0.14 +0.8
442,388 + B158DRAFT_0440 0.15 +1.4
442,396 - B158DRAFT_0440 0.16 -1.2
442,396 - B158DRAFT_0440 0.16 +0.0
442,396 - B158DRAFT_0440 0.16 -1.4
442,443 + B158DRAFT_0440 0.21 -2.5
442,455 + B158DRAFT_0440 0.22 +0.6
442,511 - B158DRAFT_0440 0.28 +0.3
442,513 + B158DRAFT_0440 0.28 +1.4
442,551 + B158DRAFT_0440 0.32 -0.4
442,551 + B158DRAFT_0440 0.32 -2.0
442,559 - B158DRAFT_0440 0.33 -0.9
442,559 - B158DRAFT_0440 0.33 -0.8
442,559 - B158DRAFT_0440 0.33 +1.0
442,559 - B158DRAFT_0440 0.33 -0.1
442,775 + B158DRAFT_0440 0.55 -0.6
442,775 + B158DRAFT_0440 0.55 +1.3
442,775 + B158DRAFT_0440 0.55 +0.1
442,783 - B158DRAFT_0440 0.56 -0.5
442,808 + B158DRAFT_0440 0.58 -0.9
442,812 + B158DRAFT_0440 0.59 -0.5
442,820 - B158DRAFT_0440 0.60 -0.1
442,850 + B158DRAFT_0440 0.63 -0.5
442,885 + B158DRAFT_0440 0.66 +1.1
442,953 - B158DRAFT_0440 0.73 -0.3
443,037 + B158DRAFT_0440 0.82 +0.2
443,042 + B158DRAFT_0440 0.83 +0.4
443,042 + B158DRAFT_0440 0.83 -1.0
443,042 + B158DRAFT_0440 0.83 -1.2
443,043 + B158DRAFT_0440 0.83 +2.1
443,043 + B158DRAFT_0440 0.83 +0.1
443,051 - B158DRAFT_0440 0.83 -1.2
443,051 - B158DRAFT_0440 0.83 +0.8
443,051 - B158DRAFT_0440 0.83 -0.7
443,138 + +0.1
443,138 + -0.8
443,138 + +0.4
443,138 + +4.1
443,138 + +0.7
443,138 + +0.2
443,138 + -0.1
443,146 - +0.3
443,146 - -0.2
443,146 - -0.8
443,146 - -0.1
443,148 - -0.3
443,261 - +0.4
443,300 - B158DRAFT_0441 0.14 +0.8
443,422 + B158DRAFT_0441 0.32 +1.2
443,473 - B158DRAFT_0441 0.39 -0.3
443,516 - B158DRAFT_0441 0.46 +2.4
443,526 - B158DRAFT_0441 0.47 -0.3
443,528 + B158DRAFT_0441 0.48 +1.6
443,528 + B158DRAFT_0441 0.48 +0.4
443,528 + B158DRAFT_0441 0.48 -1.5
443,528 + B158DRAFT_0441 0.48 -2.3
443,528 + B158DRAFT_0441 0.48 -1.4
443,528 + B158DRAFT_0441 0.48 -0.6
443,528 + B158DRAFT_0441 0.48 +0.2
443,528 + B158DRAFT_0441 0.48 +1.0
443,528 + B158DRAFT_0441 0.48 -0.1
443,528 + B158DRAFT_0441 0.48 -0.2
443,536 - B158DRAFT_0441 0.49 +0.2
443,536 - B158DRAFT_0441 0.49 -0.6
443,536 - B158DRAFT_0441 0.49 +1.5
443,536 - B158DRAFT_0441 0.49 +0.9
443,536 - B158DRAFT_0441 0.49 +1.5
443,536 - B158DRAFT_0441 0.49 +1.2
443,536 - B158DRAFT_0441 0.49 +0.5
443,536 - B158DRAFT_0441 0.49 +0.6
443,536 - B158DRAFT_0441 0.49 -0.2
443,536 - B158DRAFT_0441 0.49 -0.7
443,536 - B158DRAFT_0441 0.49 -0.6
443,536 - B158DRAFT_0441 0.49 -1.1
443,573 + B158DRAFT_0441 0.54 -0.5
443,675 + B158DRAFT_0441 0.69 +0.6
443,675 + B158DRAFT_0441 0.69 -0.7
443,675 + B158DRAFT_0441 0.69 -0.0
443,683 - B158DRAFT_0441 0.70 -0.3
443,747 - B158DRAFT_0441 0.80 +1.0
443,814 + B158DRAFT_0441 0.89 -0.3
443,814 + B158DRAFT_0441 0.89 +0.4
443,814 + B158DRAFT_0441 0.89 -0.4
443,814 + B158DRAFT_0441 0.89 +5.5
443,814 + B158DRAFT_0441 0.89 +0.9
443,814 + B158DRAFT_0441 0.89 -0.9
443,821 + +5.1
443,822 - -0.2
443,822 - +0.8
443,822 - +0.0
443,822 - -0.5
443,822 - +0.5
443,849 + -1.2
443,849 + -1.2
443,857 - +0.1

Or see this region's nucleotide sequence