Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0354

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0352 and B158DRAFT_0353 are separated by 6 nucleotidesB158DRAFT_0353 and B158DRAFT_0354 are separated by 132 nucleotidesB158DRAFT_0354 and B158DRAFT_0355 are separated by 72 nucleotides B158DRAFT_0352: B158DRAFT_0352 - ATP-dependent DNA helicase Rep (EC 3.6.1.-), at 353,470 to 355,536 _0352 B158DRAFT_0353: B158DRAFT_0353 - Lactoylglutathione lyase and related lyases, at 355,543 to 355,935 _0353 B158DRAFT_0354: B158DRAFT_0354 - hypothetical protein, at 356,068 to 356,211 _0354 B158DRAFT_0355: B158DRAFT_0355 - fatty oxidation complex, beta subunit FadA, at 356,284 to 357,453 _0355 Position (kb) 356 357Strain fitness (log2 ratio) -2 -1 0 1 2 3at 355.078 kb on - strand, within B158DRAFT_0352at 355.092 kb on + strand, within B158DRAFT_0352at 355.123 kb on - strand, within B158DRAFT_0352at 355.349 kb on + strandat 355.386 kb on + strandat 355.395 kb on - strandat 355.395 kb on - strandat 355.572 kb on - strandat 355.609 kb on - strand, within B158DRAFT_0353at 355.727 kb on + strand, within B158DRAFT_0353at 355.727 kb on + strand, within B158DRAFT_0353at 355.769 kb on - strand, within B158DRAFT_0353at 355.831 kb on - strand, within B158DRAFT_0353at 355.845 kb on + strand, within B158DRAFT_0353at 355.853 kb on - strand, within B158DRAFT_0353at 355.922 kb on + strandat 355.959 kb on + strandat 355.959 kb on + strandat 355.967 kb on - strandat 355.979 kb on + strandat 356.061 kb on - strandat 356.327 kb on + strandat 356.431 kb on + strand, within B158DRAFT_0355at 356.433 kb on + strand, within B158DRAFT_0355at 356.438 kb on - strand, within B158DRAFT_0355at 356.491 kb on + strand, within B158DRAFT_0355at 356.599 kb on - strand, within B158DRAFT_0355at 356.672 kb on - strand, within B158DRAFT_0355at 356.704 kb on - strand, within B158DRAFT_0355at 356.923 kb on - strand, within B158DRAFT_0355at 356.939 kb on - strand, within B158DRAFT_0355at 356.956 kb on - strand, within B158DRAFT_0355at 356.980 kb on - strand, within B158DRAFT_0355at 357.034 kb on + strand, within B158DRAFT_0355at 357.042 kb on - strand, within B158DRAFT_0355at 357.094 kb on - strand, within B158DRAFT_0355at 357.149 kb on + strand, within B158DRAFT_0355at 357.173 kb on - strand, within B158DRAFT_0355at 357.201 kb on - strand, within B158DRAFT_0355

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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355,078 - B158DRAFT_0352 0.78 +3.2
355,092 + B158DRAFT_0352 0.78 +1.5
355,123 - B158DRAFT_0352 0.80 +0.1
355,349 + +2.6
355,386 + +2.6
355,395 - +0.4
355,395 - +2.7
355,572 - +0.2
355,609 - B158DRAFT_0353 0.17 +0.6
355,727 + B158DRAFT_0353 0.47 -1.6
355,727 + B158DRAFT_0353 0.47 -1.5
355,769 - B158DRAFT_0353 0.58 -0.3
355,831 - B158DRAFT_0353 0.73 -1.6
355,845 + B158DRAFT_0353 0.77 +1.9
355,853 - B158DRAFT_0353 0.79 -1.1
355,922 + +2.5
355,959 + -0.9
355,959 + +1.0
355,967 - +1.4
355,979 + +1.0
356,061 - -0.9
356,327 + +1.5
356,431 + B158DRAFT_0355 0.13 -0.2
356,433 + B158DRAFT_0355 0.13 +2.1
356,438 - B158DRAFT_0355 0.13 -1.0
356,491 + B158DRAFT_0355 0.18 +0.2
356,599 - B158DRAFT_0355 0.27 -0.8
356,672 - B158DRAFT_0355 0.33 -0.4
356,704 - B158DRAFT_0355 0.36 -0.4
356,923 - B158DRAFT_0355 0.55 +0.8
356,939 - B158DRAFT_0355 0.56 -0.7
356,956 - B158DRAFT_0355 0.57 -0.5
356,980 - B158DRAFT_0355 0.59 -0.0
357,034 + B158DRAFT_0355 0.64 -1.1
357,042 - B158DRAFT_0355 0.65 -1.9
357,094 - B158DRAFT_0355 0.69 +0.2
357,149 + B158DRAFT_0355 0.74 -0.4
357,173 - B158DRAFT_0355 0.76 -0.0
357,201 - B158DRAFT_0355 0.78 -1.9

Or see this region's nucleotide sequence