Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0334

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0333 and B158DRAFT_0334 are separated by 103 nucleotidesB158DRAFT_0334 and B158DRAFT_0335 are separated by 19 nucleotides B158DRAFT_0333: B158DRAFT_0333 - Domain of unknown function (DUF1996)., at 334,999 to 336,411 _0333 B158DRAFT_0334: B158DRAFT_0334 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 336,515 to 337,177 _0334 B158DRAFT_0335: B158DRAFT_0335 - Signal transduction histidine kinase, at 337,197 to 338,639 _0335 Position (kb) 336 337 338Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 335.529 kb on - strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.554 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.577 kb on + strand, within B158DRAFT_0333at 335.604 kb on - strand, within B158DRAFT_0333at 335.643 kb on + strand, within B158DRAFT_0333at 335.752 kb on - strand, within B158DRAFT_0333at 335.799 kb on + strand, within B158DRAFT_0333at 335.799 kb on + strand, within B158DRAFT_0333at 335.837 kb on + strand, within B158DRAFT_0333at 335.866 kb on + strand, within B158DRAFT_0333at 335.893 kb on + strand, within B158DRAFT_0333at 335.955 kb on - strand, within B158DRAFT_0333at 336.000 kb on + strand, within B158DRAFT_0333at 336.000 kb on + strand, within B158DRAFT_0333at 336.008 kb on - strand, within B158DRAFT_0333at 336.098 kb on + strand, within B158DRAFT_0333at 336.180 kb on - strand, within B158DRAFT_0333at 336.182 kb on + strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.190 kb on - strand, within B158DRAFT_0333at 336.208 kb on + strand, within B158DRAFT_0333at 336.228 kb on - strand, within B158DRAFT_0333at 336.323 kb on - strandat 336.368 kb on + strandat 336.376 kb on - strandat 336.418 kb on + strandat 336.450 kb on - strandat 336.458 kb on - strandat 336.458 kb on - strandat 336.458 kb on - strandat 336.502 kb on + strandat 336.567 kb on + strandat 336.611 kb on + strand, within B158DRAFT_0334at 336.715 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.802 kb on - strand, within B158DRAFT_0334at 336.802 kb on - strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.832 kb on - strand, within B158DRAFT_0334at 336.871 kb on - strand, within B158DRAFT_0334at 336.943 kb on + strand, within B158DRAFT_0334at 336.988 kb on + strand, within B158DRAFT_0334at 337.012 kb on + strand, within B158DRAFT_0334at 337.087 kb on - strand, within B158DRAFT_0334at 337.124 kb on + strandat 337.179 kb on + strandat 337.189 kb on + strandat 337.192 kb on - strandat 337.197 kb on - strandat 337.237 kb on - strandat 337.279 kb on - strandat 337.351 kb on + strand, within B158DRAFT_0335at 337.475 kb on - strand, within B158DRAFT_0335at 337.486 kb on + strand, within B158DRAFT_0335at 337.486 kb on - strand, within B158DRAFT_0335at 337.489 kb on - strand, within B158DRAFT_0335at 337.494 kb on - strand, within B158DRAFT_0335at 337.494 kb on - strand, within B158DRAFT_0335at 337.498 kb on + strand, within B158DRAFT_0335at 337.557 kb on - strand, within B158DRAFT_0335at 337.654 kb on - strand, within B158DRAFT_0335at 337.683 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.957 kb on + strand, within B158DRAFT_0335at 337.963 kb on + strand, within B158DRAFT_0335at 337.963 kb on + strand, within B158DRAFT_0335at 337.971 kb on - strand, within B158DRAFT_0335at 338.031 kb on + strand, within B158DRAFT_0335at 338.055 kb on + strand, within B158DRAFT_0335at 338.060 kb on + strand, within B158DRAFT_0335at 338.063 kb on - strand, within B158DRAFT_0335at 338.087 kb on + strand, within B158DRAFT_0335at 338.087 kb on + strand, within B158DRAFT_0335at 338.151 kb on - strand, within B158DRAFT_0335at 338.167 kb on + strand, within B158DRAFT_0335at 338.175 kb on - strand, within B158DRAFT_0335at 338.175 kb on - strand, within B158DRAFT_0335

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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335,529 - B158DRAFT_0333 0.38 -0.7
335,546 + B158DRAFT_0333 0.39 +1.1
335,546 + B158DRAFT_0333 0.39 +2.3
335,546 + B158DRAFT_0333 0.39 -1.0
335,551 + B158DRAFT_0333 0.39 -0.8
335,551 + B158DRAFT_0333 0.39 +6.1
335,551 + B158DRAFT_0333 0.39 -0.8
335,551 + B158DRAFT_0333 0.39 -1.2
335,551 + B158DRAFT_0333 0.39 -0.1
335,551 + B158DRAFT_0333 0.39 +1.0
335,551 + B158DRAFT_0333 0.39 -0.2
335,554 - B158DRAFT_0333 0.39 -1.4
335,559 - B158DRAFT_0333 0.40 +1.8
335,559 - B158DRAFT_0333 0.40 -1.4
335,559 - B158DRAFT_0333 0.40 -1.6
335,559 - B158DRAFT_0333 0.40 -2.1
335,559 - B158DRAFT_0333 0.40 -0.6
335,559 - B158DRAFT_0333 0.40 +0.2
335,559 - B158DRAFT_0333 0.40 +0.8
335,559 - B158DRAFT_0333 0.40 -0.6
335,559 - B158DRAFT_0333 0.40 -0.9
335,559 - B158DRAFT_0333 0.40 +0.6
335,559 - B158DRAFT_0333 0.40 -0.6
335,559 - B158DRAFT_0333 0.40 +0.5
335,559 - B158DRAFT_0333 0.40 +0.2
335,559 - B158DRAFT_0333 0.40 +0.8
335,577 + B158DRAFT_0333 0.41 -0.5
335,604 - B158DRAFT_0333 0.43 -1.4
335,643 + B158DRAFT_0333 0.46 -2.2
335,752 - B158DRAFT_0333 0.53 +0.6
335,799 + B158DRAFT_0333 0.57 -2.2
335,799 + B158DRAFT_0333 0.57 -1.3
335,837 + B158DRAFT_0333 0.59 +0.6
335,866 + B158DRAFT_0333 0.61 +2.5
335,893 + B158DRAFT_0333 0.63 -1.9
335,955 - B158DRAFT_0333 0.68 +1.2
336,000 + B158DRAFT_0333 0.71 -0.2
336,000 + B158DRAFT_0333 0.71 +0.2
336,008 - B158DRAFT_0333 0.71 -0.3
336,098 + B158DRAFT_0333 0.78 +0.0
336,180 - B158DRAFT_0333 0.84 +0.1
336,182 + B158DRAFT_0333 0.84 -0.1
336,190 - B158DRAFT_0333 0.84 +0.7
336,190 - B158DRAFT_0333 0.84 -1.5
336,190 - B158DRAFT_0333 0.84 +1.3
336,190 - B158DRAFT_0333 0.84 -0.0
336,190 - B158DRAFT_0333 0.84 -1.9
336,190 - B158DRAFT_0333 0.84 -0.9
336,208 + B158DRAFT_0333 0.86 +1.0
336,228 - B158DRAFT_0333 0.87 -1.2
336,323 - -1.9
336,368 + +0.3
336,376 - -0.4
336,418 + +2.4
336,450 - +0.0
336,458 - -1.2
336,458 - -0.5
336,458 - +1.6
336,502 + -0.8
336,567 + -0.6
336,611 + B158DRAFT_0334 0.14 -1.0
336,715 + B158DRAFT_0334 0.30 +2.9
336,794 + B158DRAFT_0334 0.42 +1.0
336,794 + B158DRAFT_0334 0.42 -1.1
336,794 + B158DRAFT_0334 0.42 +1.2
336,794 + B158DRAFT_0334 0.42 -0.1
336,802 - B158DRAFT_0334 0.43 +0.9
336,802 - B158DRAFT_0334 0.43 +0.1
336,824 + B158DRAFT_0334 0.47 +1.7
336,824 + B158DRAFT_0334 0.47 -0.5
336,824 + B158DRAFT_0334 0.47 +0.6
336,832 - B158DRAFT_0334 0.48 +4.1
336,871 - B158DRAFT_0334 0.54 -0.7
336,943 + B158DRAFT_0334 0.65 +0.4
336,988 + B158DRAFT_0334 0.71 +0.4
337,012 + B158DRAFT_0334 0.75 -0.2
337,087 - B158DRAFT_0334 0.86 -0.5
337,124 + +2.1
337,179 + +0.2
337,189 + +2.1
337,192 - +0.0
337,197 - -0.4
337,237 - +1.3
337,279 - +2.5
337,351 + B158DRAFT_0335 0.11 -0.7
337,475 - B158DRAFT_0335 0.19 +2.7
337,486 + B158DRAFT_0335 0.20 +0.5
337,486 - B158DRAFT_0335 0.20 -1.1
337,489 - B158DRAFT_0335 0.20 +0.0
337,494 - B158DRAFT_0335 0.21 -0.1
337,494 - B158DRAFT_0335 0.21 -1.9
337,498 + B158DRAFT_0335 0.21 +0.4
337,557 - B158DRAFT_0335 0.25 +1.3
337,654 - B158DRAFT_0335 0.32 -1.5
337,683 + B158DRAFT_0335 0.34 -0.7
337,910 + B158DRAFT_0335 0.49 -0.5
337,910 + B158DRAFT_0335 0.49 +3.1
337,910 + B158DRAFT_0335 0.49 -0.1
337,910 + B158DRAFT_0335 0.49 +1.9
337,918 - B158DRAFT_0335 0.50 -0.5
337,918 - B158DRAFT_0335 0.50 +0.1
337,918 - B158DRAFT_0335 0.50 -0.2
337,918 - B158DRAFT_0335 0.50 -0.7
337,957 + B158DRAFT_0335 0.53 +1.2
337,963 + B158DRAFT_0335 0.53 +1.3
337,963 + B158DRAFT_0335 0.53 -0.2
337,971 - B158DRAFT_0335 0.54 -1.0
338,031 + B158DRAFT_0335 0.58 -0.5
338,055 + B158DRAFT_0335 0.59 +1.9
338,060 + B158DRAFT_0335 0.60 +0.2
338,063 - B158DRAFT_0335 0.60 -0.6
338,087 + B158DRAFT_0335 0.62 +0.0
338,087 + B158DRAFT_0335 0.62 +0.8
338,151 - B158DRAFT_0335 0.66 +0.1
338,167 + B158DRAFT_0335 0.67 -0.4
338,175 - B158DRAFT_0335 0.68 +0.4
338,175 - B158DRAFT_0335 0.68 -1.3

Or see this region's nucleotide sequence