Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0304 and B158DRAFT_0305 overlap by 4 nucleotides B158DRAFT_0305 and B158DRAFT_0306 are separated by 95 nucleotides B158DRAFT_0306 and B158DRAFT_0307 are separated by 29 nucleotides
B158DRAFT_0304: B158DRAFT_0304 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 307,875 to 309,242
_0304
B158DRAFT_0305: B158DRAFT_0305 - ATPase, P-type (transporting), HAD superfamily, subfamily IC, at 309,239 to 311,950
_0305
B158DRAFT_0306: B158DRAFT_0306 - Predicted flavoprotein, at 312,046 to 312,705
_0306
B158DRAFT_0307: B158DRAFT_0307 - hypothetical protein, at 312,735 to 313,187
_0307
Position (kb) 309
310
311
312 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 308.347 kb on - strand, within B158DRAFT_0304 at 308.375 kb on - strand, within B158DRAFT_0304 at 308.375 kb on - strand, within B158DRAFT_0304 at 308.437 kb on + strand, within B158DRAFT_0304 at 308.819 kb on + strand, within B158DRAFT_0304 at 308.819 kb on + strand, within B158DRAFT_0304 at 308.819 kb on + strand, within B158DRAFT_0304 at 308.824 kb on + strand, within B158DRAFT_0304 at 308.827 kb on - strand, within B158DRAFT_0304 at 308.827 kb on - strand, within B158DRAFT_0304 at 308.827 kb on - strand, within B158DRAFT_0304 at 308.876 kb on - strand, within B158DRAFT_0304 at 308.899 kb on + strand, within B158DRAFT_0304 at 308.936 kb on + strand, within B158DRAFT_0304 at 308.948 kb on + strand, within B158DRAFT_0304 at 309.006 kb on + strand, within B158DRAFT_0304 at 309.014 kb on + strand, within B158DRAFT_0304 at 309.113 kb on + strand at 309.155 kb on - strand at 309.265 kb on + strand at 309.265 kb on + strand at 309.265 kb on + strand at 309.270 kb on + strand at 309.278 kb on - strand at 309.315 kb on - strand at 309.340 kb on + strand at 309.406 kb on + strand at 309.406 kb on + strand at 309.414 kb on - strand at 309.416 kb on + strand at 309.450 kb on - strand at 309.577 kb on + strand, within B158DRAFT_0305 at 309.587 kb on + strand, within B158DRAFT_0305 at 309.691 kb on + strand, within B158DRAFT_0305 at 309.691 kb on + strand, within B158DRAFT_0305 at 309.699 kb on - strand, within B158DRAFT_0305 at 309.735 kb on - strand, within B158DRAFT_0305 at 309.740 kb on + strand, within B158DRAFT_0305 at 309.748 kb on - strand, within B158DRAFT_0305 at 309.869 kb on - strand, within B158DRAFT_0305 at 310.070 kb on + strand, within B158DRAFT_0305 at 310.072 kb on + strand, within B158DRAFT_0305 at 310.088 kb on - strand, within B158DRAFT_0305 at 310.107 kb on + strand, within B158DRAFT_0305 at 310.107 kb on + strand, within B158DRAFT_0305 at 310.107 kb on + strand, within B158DRAFT_0305 at 310.107 kb on + strand, within B158DRAFT_0305 at 310.115 kb on - strand, within B158DRAFT_0305 at 310.182 kb on + strand, within B158DRAFT_0305 at 310.187 kb on + strand, within B158DRAFT_0305 at 310.305 kb on + strand, within B158DRAFT_0305 at 310.402 kb on - strand, within B158DRAFT_0305 at 310.436 kb on + strand, within B158DRAFT_0305 at 310.444 kb on - strand, within B158DRAFT_0305 at 310.449 kb on - strand, within B158DRAFT_0305 at 310.483 kb on - strand, within B158DRAFT_0305 at 310.605 kb on + strand, within B158DRAFT_0305 at 310.688 kb on - strand, within B158DRAFT_0305 at 310.879 kb on - strand, within B158DRAFT_0305 at 311.013 kb on - strand, within B158DRAFT_0305 at 311.036 kb on - strand, within B158DRAFT_0305 at 311.043 kb on - strand, within B158DRAFT_0305 at 311.043 kb on - strand, within B158DRAFT_0305 at 311.222 kb on - strand, within B158DRAFT_0305 at 311.286 kb on + strand, within B158DRAFT_0305 at 311.319 kb on + strand, within B158DRAFT_0305 at 311.320 kb on - strand, within B158DRAFT_0305 at 311.375 kb on + strand, within B158DRAFT_0305 at 311.375 kb on + strand, within B158DRAFT_0305 at 311.390 kb on + strand, within B158DRAFT_0305 at 311.400 kb on + strand, within B158DRAFT_0305 at 311.556 kb on - strand, within B158DRAFT_0305 at 311.571 kb on + strand, within B158DRAFT_0305 at 311.579 kb on - strand, within B158DRAFT_0305 at 311.579 kb on - strand, within B158DRAFT_0305 at 311.579 kb on - strand, within B158DRAFT_0305 at 311.758 kb on - strand at 311.819 kb on - strand at 311.854 kb on + strand at 311.861 kb on + strand at 311.862 kb on - strand at 311.862 kb on - strand at 311.862 kb on - strand at 311.862 kb on - strand at 311.870 kb on + strand at 311.870 kb on + strand at 311.870 kb on + strand at 311.870 kb on + strand at 311.878 kb on - strand at 311.878 kb on - strand at 311.878 kb on - strand at 311.880 kb on - strand at 311.885 kb on - strand at 311.954 kb on + strand at 311.961 kb on + strand at 311.994 kb on + strand at 311.995 kb on + strand at 312.002 kb on - strand at 312.058 kb on - strand at 312.128 kb on - strand, within B158DRAFT_0306 at 312.155 kb on + strand, within B158DRAFT_0306 at 312.184 kb on + strand, within B158DRAFT_0306 at 312.267 kb on + strand, within B158DRAFT_0306 at 312.277 kb on + strand, within B158DRAFT_0306 at 312.277 kb on + strand, within B158DRAFT_0306 at 312.285 kb on - strand, within B158DRAFT_0306 at 312.285 kb on - strand, within B158DRAFT_0306 at 312.328 kb on + strand, within B158DRAFT_0306 at 312.328 kb on + strand, within B158DRAFT_0306 at 312.336 kb on - strand, within B158DRAFT_0306 at 312.338 kb on + strand, within B158DRAFT_0306 at 312.338 kb on + strand, within B158DRAFT_0306 at 312.346 kb on - strand, within B158DRAFT_0306 at 312.363 kb on + strand, within B158DRAFT_0306 at 312.375 kb on + strand, within B158DRAFT_0306 at 312.375 kb on + strand, within B158DRAFT_0306 at 312.383 kb on - strand, within B158DRAFT_0306 at 312.411 kb on - strand, within B158DRAFT_0306 at 312.427 kb on - strand, within B158DRAFT_0306 at 312.435 kb on + strand, within B158DRAFT_0306 at 312.435 kb on + strand, within B158DRAFT_0306 at 312.435 kb on + strand, within B158DRAFT_0306 at 312.443 kb on - strand, within B158DRAFT_0306 at 312.443 kb on - strand, within B158DRAFT_0306 at 312.445 kb on + strand, within B158DRAFT_0306 at 312.453 kb on - strand, within B158DRAFT_0306 at 312.512 kb on + strand, within B158DRAFT_0306 at 312.566 kb on + strand, within B158DRAFT_0306 at 312.576 kb on + strand, within B158DRAFT_0306 at 312.576 kb on + strand, within B158DRAFT_0306 at 312.596 kb on - strand, within B158DRAFT_0306 at 312.648 kb on + strand at 312.653 kb on + strand at 312.653 kb on + strand at 312.653 kb on + strand at 312.653 kb on + strand at 312.660 kb on - strand at 312.661 kb on - strand at 312.661 kb on - strand at 312.661 kb on - strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.670 kb on + strand at 312.678 kb on - strand at 312.678 kb on - strand at 312.678 kb on - strand at 312.678 kb on - strand at 312.700 kb on - strand at 312.765 kb on + strand at 312.829 kb on - strand, within B158DRAFT_0307 at 312.829 kb on - strand, within B158DRAFT_0307 at 312.858 kb on - strand, within B158DRAFT_0307 at 312.863 kb on - strand, within B158DRAFT_0307 at 312.864 kb on - strand, within B158DRAFT_0307 at 312.929 kb on + strand, within B158DRAFT_0307 at 312.937 kb on - strand, within B158DRAFT_0307
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 308,347 - B158DRAFT_0304 0.35 -0.4 308,375 - B158DRAFT_0304 0.37 -0.2 308,375 - B158DRAFT_0304 0.37 -0.8 308,437 + B158DRAFT_0304 0.41 -0.5 308,819 + B158DRAFT_0304 0.69 +0.7 308,819 + B158DRAFT_0304 0.69 -1.2 308,819 + B158DRAFT_0304 0.69 -1.0 308,824 + B158DRAFT_0304 0.69 -0.2 308,827 - B158DRAFT_0304 0.70 +0.4 308,827 - B158DRAFT_0304 0.70 +0.2 308,827 - B158DRAFT_0304 0.70 -0.8 308,876 - B158DRAFT_0304 0.73 -0.5 308,899 + B158DRAFT_0304 0.75 -1.3 308,936 + B158DRAFT_0304 0.78 -2.0 308,948 + B158DRAFT_0304 0.78 +1.5 309,006 + B158DRAFT_0304 0.83 -0.8 309,014 + B158DRAFT_0304 0.83 -1.0 309,113 + -0.9 309,155 - -2.6 309,265 + -0.1 309,265 + +1.4 309,265 + -0.5 309,270 + +1.2 309,278 - -1.3 309,315 - -1.5 309,340 + -0.7 309,406 + +0.7 309,406 + -0.9 309,414 - -1.2 309,416 + -0.6 309,450 - -0.6 309,577 + B158DRAFT_0305 0.12 +1.7 309,587 + B158DRAFT_0305 0.13 +1.6 309,691 + B158DRAFT_0305 0.17 +0.0 309,691 + B158DRAFT_0305 0.17 +0.7 309,699 - B158DRAFT_0305 0.17 +0.4 309,735 - B158DRAFT_0305 0.18 +1.7 309,740 + B158DRAFT_0305 0.18 -0.1 309,748 - B158DRAFT_0305 0.19 -1.0 309,869 - B158DRAFT_0305 0.23 +0.3 310,070 + B158DRAFT_0305 0.31 -0.5 310,072 + B158DRAFT_0305 0.31 -0.9 310,088 - B158DRAFT_0305 0.31 -0.1 310,107 + B158DRAFT_0305 0.32 +1.0 310,107 + B158DRAFT_0305 0.32 -1.0 310,107 + B158DRAFT_0305 0.32 +2.1 310,107 + B158DRAFT_0305 0.32 +2.0 310,115 - B158DRAFT_0305 0.32 +0.1 310,182 + B158DRAFT_0305 0.35 -0.2 310,187 + B158DRAFT_0305 0.35 -1.5 310,305 + B158DRAFT_0305 0.39 -0.2 310,402 - B158DRAFT_0305 0.43 -0.3 310,436 + B158DRAFT_0305 0.44 -0.8 310,444 - B158DRAFT_0305 0.44 -0.5 310,449 - B158DRAFT_0305 0.45 -0.9 310,483 - B158DRAFT_0305 0.46 -0.5 310,605 + B158DRAFT_0305 0.50 -0.8 310,688 - B158DRAFT_0305 0.53 -0.6 310,879 - B158DRAFT_0305 0.60 -0.1 311,013 - B158DRAFT_0305 0.65 +0.3 311,036 - B158DRAFT_0305 0.66 +1.1 311,043 - B158DRAFT_0305 0.67 +0.7 311,043 - B158DRAFT_0305 0.67 +1.1 311,222 - B158DRAFT_0305 0.73 -0.0 311,286 + B158DRAFT_0305 0.75 +1.2 311,319 + B158DRAFT_0305 0.77 -0.2 311,320 - B158DRAFT_0305 0.77 -1.0 311,375 + B158DRAFT_0305 0.79 +1.3 311,375 + B158DRAFT_0305 0.79 +0.4 311,390 + B158DRAFT_0305 0.79 -0.5 311,400 + B158DRAFT_0305 0.80 +3.1 311,556 - B158DRAFT_0305 0.85 +0.0 311,571 + B158DRAFT_0305 0.86 -0.5 311,579 - B158DRAFT_0305 0.86 -1.0 311,579 - B158DRAFT_0305 0.86 -2.4 311,579 - B158DRAFT_0305 0.86 -1.0 311,758 - +0.2 311,819 - -0.7 311,854 + -0.9 311,861 + -0.6 311,862 - -0.8 311,862 - +0.8 311,862 - +2.3 311,862 - -0.4 311,870 + +1.6 311,870 + +1.6 311,870 + -0.9 311,870 + -0.1 311,878 - -1.9 311,878 - -0.2 311,878 - +0.9 311,880 - +1.3 311,885 - +1.4 311,954 + +0.3 311,961 + -0.4 311,994 + +0.4 311,995 + -0.3 312,002 - +0.1 312,058 - -0.4 312,128 - B158DRAFT_0306 0.12 -0.7 312,155 + B158DRAFT_0306 0.17 +1.5 312,184 + B158DRAFT_0306 0.21 +4.1 312,267 + B158DRAFT_0306 0.33 -0.5 312,277 + B158DRAFT_0306 0.35 -1.4 312,277 + B158DRAFT_0306 0.35 +0.0 312,285 - B158DRAFT_0306 0.36 -0.3 312,285 - B158DRAFT_0306 0.36 +0.2 312,328 + B158DRAFT_0306 0.43 +0.5 312,328 + B158DRAFT_0306 0.43 +0.0 312,336 - B158DRAFT_0306 0.44 -0.5 312,338 + B158DRAFT_0306 0.44 -0.5 312,338 + B158DRAFT_0306 0.44 -0.7 312,346 - B158DRAFT_0306 0.45 +1.4 312,363 + B158DRAFT_0306 0.48 -1.0 312,375 + B158DRAFT_0306 0.50 -0.9 312,375 + B158DRAFT_0306 0.50 -1.1 312,383 - B158DRAFT_0306 0.51 +0.7 312,411 - B158DRAFT_0306 0.55 -1.3 312,427 - B158DRAFT_0306 0.58 -0.4 312,435 + B158DRAFT_0306 0.59 -0.5 312,435 + B158DRAFT_0306 0.59 -1.5 312,435 + B158DRAFT_0306 0.59 -2.0 312,443 - B158DRAFT_0306 0.60 +1.4 312,443 - B158DRAFT_0306 0.60 -1.2 312,445 + B158DRAFT_0306 0.60 -0.7 312,453 - B158DRAFT_0306 0.62 -0.8 312,512 + B158DRAFT_0306 0.71 +0.6 312,566 + B158DRAFT_0306 0.79 -0.7 312,576 + B158DRAFT_0306 0.80 +0.3 312,576 + B158DRAFT_0306 0.80 -0.7 312,596 - B158DRAFT_0306 0.83 +0.5 312,648 + -0.0 312,653 + -0.4 312,653 + -1.4 312,653 + -0.3 312,653 + +0.4 312,660 - -0.8 312,661 - -0.8 312,661 - -0.0 312,661 - -1.1 312,670 + +0.0 312,670 + -2.6 312,670 + -2.4 312,670 + -0.8 312,670 + -1.4 312,670 + -1.1 312,670 + +0.8 312,670 + -1.0 312,678 - -1.3 312,678 - -0.3 312,678 - +1.6 312,678 - -0.0 312,700 - -0.9 312,765 + -1.3 312,829 - B158DRAFT_0307 0.21 -0.5 312,829 - B158DRAFT_0307 0.21 -0.6 312,858 - B158DRAFT_0307 0.27 -0.4 312,863 - B158DRAFT_0307 0.28 +0.4 312,864 - B158DRAFT_0307 0.28 +0.7 312,929 + B158DRAFT_0307 0.43 -0.9 312,937 - B158DRAFT_0307 0.45 -1.2
Or see this region's nucleotide sequence