Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0268

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0266 and B158DRAFT_0267 are separated by 44 nucleotidesB158DRAFT_0267 and B158DRAFT_0268 are separated by 160 nucleotidesB158DRAFT_0268 and B158DRAFT_0269 are separated by 387 nucleotides B158DRAFT_0266: B158DRAFT_0266 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 271,091 to 271,951 _0266 B158DRAFT_0267: B158DRAFT_0267 - ribulose-phosphate 3-epimerase, at 271,996 to 272,673 _0267 B158DRAFT_0268: B158DRAFT_0268 - Protein of unknown function (DUF3050)., at 272,834 to 273,577 _0268 B158DRAFT_0269: B158DRAFT_0269 - hypothetical protein, at 273,965 to 274,501 _0269 Position (kb) 272 273 274Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 271.873 kb on - strandat 272.001 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.756 kb on - strandat 272.767 kb on - strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.793 kb on - strandat 272.793 kb on - strandat 272.839 kb on - strandat 272.839 kb on - strandat 272.841 kb on + strandat 272.993 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.169 kb on + strand, within B158DRAFT_0268at 273.191 kb on + strand, within B158DRAFT_0268at 273.193 kb on + strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.218 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.333 kb on - strand, within B158DRAFT_0268at 273.416 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.473 kb on - strand, within B158DRAFT_0268at 273.515 kb on - strandat 273.533 kb on - strandat 273.537 kb on + strandat 273.555 kb on - strandat 273.556 kb on - strandat 273.597 kb on + strandat 273.605 kb on - strandat 273.742 kb on - strandat 273.899 kb on + strandat 273.899 kb on + strandat 273.899 kb on + strandat 273.907 kb on - strandat 273.907 kb on - strandat 273.907 kb on - strandat 273.949 kb on + strandat 274.024 kb on + strand, within B158DRAFT_0269at 274.025 kb on - strand, within B158DRAFT_0269at 274.031 kb on - strand, within B158DRAFT_0269at 274.031 kb on - strand, within B158DRAFT_0269at 274.080 kb on + strand, within B158DRAFT_0269at 274.105 kb on + strand, within B158DRAFT_0269at 274.113 kb on - strand, within B158DRAFT_0269at 274.113 kb on - strand, within B158DRAFT_0269at 274.138 kb on + strand, within B158DRAFT_0269at 274.147 kb on + strand, within B158DRAFT_0269at 274.155 kb on - strand, within B158DRAFT_0269at 274.155 kb on - strand, within B158DRAFT_0269at 274.161 kb on + strand, within B158DRAFT_0269at 274.169 kb on - strand, within B158DRAFT_0269at 274.177 kb on - strand, within B158DRAFT_0269at 274.207 kb on + strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.259 kb on - strand, within B158DRAFT_0269at 274.260 kb on - strand, within B158DRAFT_0269at 274.296 kb on + strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.314 kb on - strand, within B158DRAFT_0269at 274.439 kb on + strand, within B158DRAFT_0269at 274.452 kb on - strandat 274.474 kb on + strandat 274.486 kb on + strandat 274.486 kb on + strandat 274.486 kb on + strandat 274.494 kb on - strandat 274.549 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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271,873 - -1.7
272,001 - +1.6
272,701 - +1.0
272,701 - +0.5
272,701 - +0.1
272,701 - +0.8
272,701 - +1.0
272,756 - -0.5
272,767 - +1.2
272,785 + +2.7
272,785 + -1.5
272,785 + -0.4
272,785 + +0.4
272,785 + +0.2
272,793 - +1.1
272,793 - -0.1
272,839 - -0.1
272,839 - -0.8
272,841 + +1.9
272,993 + B158DRAFT_0268 0.21 +0.9
273,043 + B158DRAFT_0268 0.28 +2.2
273,043 + B158DRAFT_0268 0.28 +0.4
273,043 + B158DRAFT_0268 0.28 -0.5
273,043 + B158DRAFT_0268 0.28 -0.1
273,043 + B158DRAFT_0268 0.28 -0.4
273,051 - B158DRAFT_0268 0.29 -1.3
273,051 - B158DRAFT_0268 0.29 -1.5
273,051 - B158DRAFT_0268 0.29 +1.6
273,169 + B158DRAFT_0268 0.45 +0.5
273,191 + B158DRAFT_0268 0.48 -0.0
273,193 + B158DRAFT_0268 0.48 +0.3
273,201 - B158DRAFT_0268 0.49 -0.5
273,201 - B158DRAFT_0268 0.49 -1.2
273,201 - B158DRAFT_0268 0.49 -0.6
273,218 + B158DRAFT_0268 0.52 +4.8
273,239 + B158DRAFT_0268 0.54 +0.3
273,239 + B158DRAFT_0268 0.54 -0.2
273,333 - B158DRAFT_0268 0.67 -1.2
273,416 + B158DRAFT_0268 0.78 +0.9
273,465 + B158DRAFT_0268 0.85 -0.9
273,465 + B158DRAFT_0268 0.85 -1.0
273,465 + B158DRAFT_0268 0.85 -1.2
273,473 - B158DRAFT_0268 0.86 -1.3
273,515 - -0.7
273,533 - -1.7
273,537 + -0.7
273,555 - -0.2
273,556 - -1.5
273,597 + -0.8
273,605 - -0.9
273,742 - -1.2
273,899 + -0.8
273,899 + -1.1
273,899 + -1.0
273,907 - -0.3
273,907 - -0.4
273,907 - -2.4
273,949 + -0.5
274,024 + B158DRAFT_0269 0.11 -1.0
274,025 - B158DRAFT_0269 0.11 -1.1
274,031 - B158DRAFT_0269 0.12 -0.8
274,031 - B158DRAFT_0269 0.12 +0.4
274,080 + B158DRAFT_0269 0.21 -0.1
274,105 + B158DRAFT_0269 0.26 -1.1
274,113 - B158DRAFT_0269 0.28 -0.5
274,113 - B158DRAFT_0269 0.28 -1.0
274,138 + B158DRAFT_0269 0.32 -0.5
274,147 + B158DRAFT_0269 0.34 +0.8
274,155 - B158DRAFT_0269 0.35 +0.4
274,155 - B158DRAFT_0269 0.35 -1.7
274,161 + B158DRAFT_0269 0.36 -0.7
274,169 - B158DRAFT_0269 0.38 +1.0
274,177 - B158DRAFT_0269 0.39 -0.1
274,207 + B158DRAFT_0269 0.45 +0.1
274,215 - B158DRAFT_0269 0.47 +0.5
274,215 - B158DRAFT_0269 0.47 -1.2
274,215 - B158DRAFT_0269 0.47 -1.5
274,215 - B158DRAFT_0269 0.47 -0.8
274,215 - B158DRAFT_0269 0.47 +1.9
274,259 - B158DRAFT_0269 0.55 +1.0
274,260 - B158DRAFT_0269 0.55 +0.1
274,296 + B158DRAFT_0269 0.62 -0.4
274,304 - B158DRAFT_0269 0.63 +0.6
274,304 - B158DRAFT_0269 0.63 +0.5
274,304 - B158DRAFT_0269 0.63 -0.9
274,314 - B158DRAFT_0269 0.65 -1.0
274,439 + B158DRAFT_0269 0.88 +1.0
274,452 - +0.3
274,474 + -0.5
274,486 + -0.6
274,486 + -1.4
274,486 + -1.0
274,494 - +0.1
274,549 - -1.6

Or see this region's nucleotide sequence