Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0112

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0111 and B158DRAFT_0112 are separated by 43 nucleotidesB158DRAFT_0112 and B158DRAFT_0113 are separated by 462 nucleotidesB158DRAFT_0113 and B158DRAFT_0114 are separated by 324 nucleotides B158DRAFT_0111: B158DRAFT_0111 - NusA antitermination factor, at 107,298 to 108,791 _0111 B158DRAFT_0112: B158DRAFT_0112 - Uncharacterized protein conserved in bacteria, at 108,835 to 109,287 _0112 B158DRAFT_0113: B158DRAFT_0113 - tRNA_Met_CAT, at 109,750 to 109,826 _0113 B158DRAFT_0114: B158DRAFT_0114 - NADH dehydrogenase subunit N (EC 1.6.5.3), at 110,151 to 111,581 _0114 Position (kb) 108 109 110Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7at 108.809 kb on - strandat 108.953 kb on - strand, within B158DRAFT_0112at 109.002 kb on - strand, within B158DRAFT_0112at 109.131 kb on - strand, within B158DRAFT_0112at 109.136 kb on - strand, within B158DRAFT_0112at 109.136 kb on - strand, within B158DRAFT_0112at 109.225 kb on - strand, within B158DRAFT_0112at 109.531 kb on + strandat 109.550 kb on + strandat 109.599 kb on - strandat 109.599 kb on - strandat 109.604 kb on - strandat 109.619 kb on - strandat 109.716 kb on + strandat 110.085 kb on - strandat 110.101 kb on - strandat 110.132 kb on + strandat 110.150 kb on - strandat 110.156 kb on - strandat 110.156 kb on - strandat 110.173 kb on + strandat 110.200 kb on - strandat 110.236 kb on - strandat 110.236 kb on - strandat 110.242 kb on + strandat 110.250 kb on - strandat 110.271 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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108,809 - +1.3
108,953 - B158DRAFT_0112 0.26 +0.4
109,002 - B158DRAFT_0112 0.37 -1.4
109,131 - B158DRAFT_0112 0.65 +1.0
109,136 - B158DRAFT_0112 0.66 +2.5
109,136 - B158DRAFT_0112 0.66 +2.9
109,225 - B158DRAFT_0112 0.86 +1.1
109,531 + -1.1
109,550 + +0.2
109,599 - -0.2
109,599 - +0.1
109,604 - -0.9
109,619 - +2.8
109,716 + -1.1
110,085 - -1.3
110,101 - -0.1
110,132 + +1.0
110,150 - -1.6
110,156 - -0.1
110,156 - -1.1
110,173 + +2.2
110,200 - +5.7
110,236 - +6.8
110,236 - +6.7
110,242 + +6.6
110,250 - +6.3
110,271 - +2.9

Or see this region's nucleotide sequence