Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0100

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0099 and B158DRAFT_0100 are separated by 149 nucleotidesB158DRAFT_0100 and B158DRAFT_0101 are separated by 195 nucleotides B158DRAFT_0099: B158DRAFT_0099 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 92,470 to 93,810 _0099 B158DRAFT_0100: B158DRAFT_0100 - Na+/proline symporter, at 93,960 to 95,360 _0100 B158DRAFT_0101: B158DRAFT_0101 - YceI-like domain., at 95,556 to 96,170 _0101 Position (kb) 93 94 95 96Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 92.983 kb on - strand, within B158DRAFT_0099at 92.983 kb on - strand, within B158DRAFT_0099at 92.983 kb on - strand, within B158DRAFT_0099at 93.015 kb on - strand, within B158DRAFT_0099at 93.015 kb on - strand, within B158DRAFT_0099at 93.030 kb on - strand, within B158DRAFT_0099at 93.071 kb on - strand, within B158DRAFT_0099at 93.174 kb on - strand, within B158DRAFT_0099at 93.174 kb on - strand, within B158DRAFT_0099at 93.198 kb on - strand, within B158DRAFT_0099at 93.299 kb on - strand, within B158DRAFT_0099at 93.312 kb on - strand, within B158DRAFT_0099at 93.315 kb on - strand, within B158DRAFT_0099at 93.588 kb on - strand, within B158DRAFT_0099at 93.588 kb on - strand, within B158DRAFT_0099at 93.883 kb on - strandat 93.883 kb on - strandat 93.883 kb on - strandat 93.883 kb on - strandat 93.883 kb on - strandat 93.893 kb on - strandat 93.932 kb on + strandat 93.940 kb on - strandat 94.013 kb on - strandat 94.020 kb on + strandat 94.064 kb on - strandat 94.108 kb on + strand, within B158DRAFT_0100at 94.116 kb on - strand, within B158DRAFT_0100at 94.119 kb on + strand, within B158DRAFT_0100at 94.119 kb on + strand, within B158DRAFT_0100at 94.127 kb on - strand, within B158DRAFT_0100at 94.175 kb on + strand, within B158DRAFT_0100at 94.184 kb on + strand, within B158DRAFT_0100at 94.222 kb on - strand, within B158DRAFT_0100at 94.222 kb on - strand, within B158DRAFT_0100at 94.228 kb on - strand, within B158DRAFT_0100at 94.229 kb on - strand, within B158DRAFT_0100at 94.229 kb on - strand, within B158DRAFT_0100at 94.231 kb on + strand, within B158DRAFT_0100at 94.231 kb on + strand, within B158DRAFT_0100at 94.239 kb on - strand, within B158DRAFT_0100at 94.239 kb on - strand, within B158DRAFT_0100at 94.239 kb on - strand, within B158DRAFT_0100at 94.244 kb on + strand, within B158DRAFT_0100at 94.274 kb on + strand, within B158DRAFT_0100at 94.289 kb on - strand, within B158DRAFT_0100at 94.327 kb on - strand, within B158DRAFT_0100at 94.338 kb on - strand, within B158DRAFT_0100at 94.532 kb on - strand, within B158DRAFT_0100at 94.545 kb on + strand, within B158DRAFT_0100at 94.558 kb on + strand, within B158DRAFT_0100at 94.566 kb on - strand, within B158DRAFT_0100at 94.576 kb on - strand, within B158DRAFT_0100at 94.583 kb on + strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.601 kb on + strand, within B158DRAFT_0100at 94.626 kb on - strand, within B158DRAFT_0100at 94.630 kb on - strand, within B158DRAFT_0100at 94.707 kb on - strand, within B158DRAFT_0100at 94.733 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.751 kb on - strand, within B158DRAFT_0100at 94.818 kb on + strand, within B158DRAFT_0100at 94.829 kb on + strand, within B158DRAFT_0100at 94.829 kb on + strand, within B158DRAFT_0100at 94.841 kb on - strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.964 kb on - strand, within B158DRAFT_0100at 94.969 kb on + strand, within B158DRAFT_0100at 94.977 kb on - strand, within B158DRAFT_0100at 94.977 kb on - strand, within B158DRAFT_0100at 94.985 kb on - strand, within B158DRAFT_0100at 95.029 kb on - strand, within B158DRAFT_0100at 95.034 kb on - strand, within B158DRAFT_0100at 95.040 kb on + strand, within B158DRAFT_0100at 95.048 kb on + strand, within B158DRAFT_0100at 95.064 kb on - strand, within B158DRAFT_0100at 95.064 kb on - strand, within B158DRAFT_0100at 95.117 kb on + strand, within B158DRAFT_0100at 95.177 kb on - strand, within B158DRAFT_0100at 95.291 kb on - strandat 95.370 kb on + strandat 95.377 kb on - strandat 95.380 kb on + strandat 95.399 kb on + strandat 95.407 kb on - strandat 95.607 kb on + strandat 95.610 kb on + strandat 95.610 kb on + strandat 95.612 kb on + strandat 95.676 kb on - strand, within B158DRAFT_0101at 95.681 kb on - strand, within B158DRAFT_0101at 95.689 kb on - strand, within B158DRAFT_0101at 95.709 kb on + strand, within B158DRAFT_0101at 95.714 kb on + strand, within B158DRAFT_0101at 95.722 kb on - strand, within B158DRAFT_0101at 95.722 kb on - strand, within B158DRAFT_0101at 95.817 kb on - strand, within B158DRAFT_0101at 95.991 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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92,983 - B158DRAFT_0099 0.38 +1.1
92,983 - B158DRAFT_0099 0.38 +3.5
92,983 - B158DRAFT_0099 0.38 +2.7
93,015 - B158DRAFT_0099 0.41 +1.5
93,015 - B158DRAFT_0099 0.41 +0.6
93,030 - B158DRAFT_0099 0.42 -1.2
93,071 - B158DRAFT_0099 0.45 -1.1
93,174 - B158DRAFT_0099 0.52 -0.9
93,174 - B158DRAFT_0099 0.52 -0.6
93,198 - B158DRAFT_0099 0.54 +1.7
93,299 - B158DRAFT_0099 0.62 +0.3
93,312 - B158DRAFT_0099 0.63 +0.8
93,315 - B158DRAFT_0099 0.63 +2.5
93,588 - B158DRAFT_0099 0.83 -0.9
93,588 - B158DRAFT_0099 0.83 +0.0
93,883 - -1.1
93,883 - -0.1
93,883 - +0.8
93,883 - -0.9
93,883 - -0.5
93,893 - +0.6
93,932 + -1.9
93,940 - +0.2
94,013 - -0.8
94,020 + +0.4
94,064 - -2.1
94,108 + B158DRAFT_0100 0.11 -1.7
94,116 - B158DRAFT_0100 0.11 +0.6
94,119 + B158DRAFT_0100 0.11 +0.9
94,119 + B158DRAFT_0100 0.11 +0.1
94,127 - B158DRAFT_0100 0.12 -0.4
94,175 + B158DRAFT_0100 0.15 -1.0
94,184 + B158DRAFT_0100 0.16 +0.1
94,222 - B158DRAFT_0100 0.19 +0.8
94,222 - B158DRAFT_0100 0.19 -1.3
94,228 - B158DRAFT_0100 0.19 +0.4
94,229 - B158DRAFT_0100 0.19 -0.8
94,229 - B158DRAFT_0100 0.19 -1.1
94,231 + B158DRAFT_0100 0.19 -2.6
94,231 + B158DRAFT_0100 0.19 -1.8
94,239 - B158DRAFT_0100 0.20 -1.3
94,239 - B158DRAFT_0100 0.20 +1.4
94,239 - B158DRAFT_0100 0.20 +1.3
94,244 + B158DRAFT_0100 0.20 +0.4
94,274 + B158DRAFT_0100 0.22 -0.8
94,289 - B158DRAFT_0100 0.23 -0.7
94,327 - B158DRAFT_0100 0.26 -1.1
94,338 - B158DRAFT_0100 0.27 -0.9
94,532 - B158DRAFT_0100 0.41 +0.6
94,545 + B158DRAFT_0100 0.42 -1.1
94,558 + B158DRAFT_0100 0.43 -1.1
94,566 - B158DRAFT_0100 0.43 +0.2
94,576 - B158DRAFT_0100 0.44 +0.8
94,583 + B158DRAFT_0100 0.44 +1.5
94,591 - B158DRAFT_0100 0.45 -0.3
94,591 - B158DRAFT_0100 0.45 +0.6
94,591 - B158DRAFT_0100 0.45 -0.3
94,591 - B158DRAFT_0100 0.45 -0.3
94,601 + B158DRAFT_0100 0.46 -0.1
94,626 - B158DRAFT_0100 0.48 -1.1
94,630 - B158DRAFT_0100 0.48 +0.2
94,707 - B158DRAFT_0100 0.53 -0.7
94,733 + B158DRAFT_0100 0.55 -0.1
94,743 + B158DRAFT_0100 0.56 -0.2
94,743 + B158DRAFT_0100 0.56 -0.8
94,743 + B158DRAFT_0100 0.56 +4.7
94,743 + B158DRAFT_0100 0.56 -0.1
94,743 + B158DRAFT_0100 0.56 +0.0
94,743 + B158DRAFT_0100 0.56 +0.2
94,743 + B158DRAFT_0100 0.56 -0.0
94,743 + B158DRAFT_0100 0.56 -0.3
94,751 - B158DRAFT_0100 0.56 -1.1
94,818 + B158DRAFT_0100 0.61 -1.0
94,829 + B158DRAFT_0100 0.62 +2.1
94,829 + B158DRAFT_0100 0.62 -0.7
94,841 - B158DRAFT_0100 0.63 -0.4
94,951 + B158DRAFT_0100 0.71 -1.3
94,951 + B158DRAFT_0100 0.71 -0.8
94,951 + B158DRAFT_0100 0.71 -0.7
94,951 + B158DRAFT_0100 0.71 -0.7
94,964 - B158DRAFT_0100 0.72 -0.2
94,969 + B158DRAFT_0100 0.72 +0.2
94,977 - B158DRAFT_0100 0.73 -0.8
94,977 - B158DRAFT_0100 0.73 +1.3
94,985 - B158DRAFT_0100 0.73 -1.2
95,029 - B158DRAFT_0100 0.76 -0.3
95,034 - B158DRAFT_0100 0.77 +1.8
95,040 + B158DRAFT_0100 0.77 -0.2
95,048 + B158DRAFT_0100 0.78 +2.9
95,064 - B158DRAFT_0100 0.79 +1.1
95,064 - B158DRAFT_0100 0.79 +0.8
95,117 + B158DRAFT_0100 0.83 -0.5
95,177 - B158DRAFT_0100 0.87 +0.1
95,291 - +0.9
95,370 + +1.2
95,377 - +0.7
95,380 + -0.9
95,399 + -1.0
95,407 - -1.5
95,607 + +0.3
95,610 + +1.8
95,610 + -2.8
95,612 + -0.2
95,676 - B158DRAFT_0101 0.20 +0.4
95,681 - B158DRAFT_0101 0.20 +2.5
95,689 - B158DRAFT_0101 0.22 -0.3
95,709 + B158DRAFT_0101 0.25 -0.8
95,714 + B158DRAFT_0101 0.26 +1.4
95,722 - B158DRAFT_0101 0.27 +0.4
95,722 - B158DRAFT_0101 0.27 -1.2
95,817 - B158DRAFT_0101 0.42 -0.0
95,991 + B158DRAFT_0101 0.71 -0.9
96,058 + B158DRAFT_0101 0.82 -1.8
96,058 + B158DRAFT_0101 0.82 -0.3
96,058 + B158DRAFT_0101 0.82 -0.3
96,066 - B158DRAFT_0101 0.83 -1.7
96,066 - B158DRAFT_0101 0.83 -0.6
96,066 - B158DRAFT_0101 0.83 -0.2

Or see this region's nucleotide sequence