Experiment: m.b. copper (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0040 and B158DRAFT_0041 overlap by 35 nucleotides B158DRAFT_0041 and B158DRAFT_0042 are separated by 40 nucleotides B158DRAFT_0042 and B158DRAFT_0043 are separated by 3 nucleotides
B158DRAFT_0040: B158DRAFT_0040 - diguanylate cyclase (GGDEF) domain, at 39,907 to 41,715
_0040
B158DRAFT_0041: B158DRAFT_0041 - hypothetical protein, at 41,681 to 41,929
_0041
B158DRAFT_0042: B158DRAFT_0042 - Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain, at 41,970 to 42,707
_0042
B158DRAFT_0043: B158DRAFT_0043 - hypothetical protein, at 42,711 to 43,235
_0043
Position (kb) 41
42 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 40.723 kb on + strand, within B158DRAFT_0040 at 40.855 kb on - strand, within B158DRAFT_0040 at 40.857 kb on + strand, within B158DRAFT_0040 at 40.857 kb on + strand, within B158DRAFT_0040 at 40.889 kb on + strand, within B158DRAFT_0040 at 40.889 kb on + strand, within B158DRAFT_0040 at 40.995 kb on + strand, within B158DRAFT_0040 at 41.113 kb on + strand, within B158DRAFT_0040 at 41.283 kb on + strand, within B158DRAFT_0040 at 41.327 kb on + strand, within B158DRAFT_0040 at 41.370 kb on - strand, within B158DRAFT_0040 at 41.397 kb on - strand, within B158DRAFT_0040 at 41.397 kb on - strand, within B158DRAFT_0040 at 41.420 kb on - strand, within B158DRAFT_0040 at 41.558 kb on - strand at 41.681 kb on - strand at 41.716 kb on + strand, within B158DRAFT_0041 at 41.724 kb on - strand, within B158DRAFT_0041 at 41.734 kb on - strand, within B158DRAFT_0041 at 41.748 kb on + strand, within B158DRAFT_0041 at 41.843 kb on + strand, within B158DRAFT_0041 at 41.851 kb on - strand, within B158DRAFT_0041 at 41.851 kb on - strand, within B158DRAFT_0041 at 41.878 kb on + strand, within B158DRAFT_0041 at 41.886 kb on - strand, within B158DRAFT_0041 at 41.886 kb on - strand, within B158DRAFT_0041 at 41.891 kb on - strand, within B158DRAFT_0041 at 41.946 kb on - strand at 42.223 kb on - strand, within B158DRAFT_0042 at 42.253 kb on + strand, within B158DRAFT_0042 at 42.283 kb on + strand, within B158DRAFT_0042 at 42.511 kb on + strand, within B158DRAFT_0042 at 42.519 kb on - strand, within B158DRAFT_0042 at 42.521 kb on + strand, within B158DRAFT_0042 at 42.529 kb on - strand, within B158DRAFT_0042 at 42.529 kb on - strand, within B158DRAFT_0042 at 42.561 kb on - strand, within B158DRAFT_0042 at 42.563 kb on + strand, within B158DRAFT_0042 at 42.571 kb on - strand, within B158DRAFT_0042 at 42.571 kb on - strand, within B158DRAFT_0042 at 42.586 kb on - strand, within B158DRAFT_0042 at 42.656 kb on - strand at 42.656 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM remove 40,723 + B158DRAFT_0040 0.45 -0.6 40,855 - B158DRAFT_0040 0.52 -1.3 40,857 + B158DRAFT_0040 0.53 -2.4 40,857 + B158DRAFT_0040 0.53 +3.2 40,889 + B158DRAFT_0040 0.54 +0.5 40,889 + B158DRAFT_0040 0.54 -0.3 40,995 + B158DRAFT_0040 0.60 -0.1 41,113 + B158DRAFT_0040 0.67 -1.6 41,283 + B158DRAFT_0040 0.76 -1.0 41,327 + B158DRAFT_0040 0.78 -1.5 41,370 - B158DRAFT_0040 0.81 -0.6 41,397 - B158DRAFT_0040 0.82 +1.6 41,397 - B158DRAFT_0040 0.82 -0.2 41,420 - B158DRAFT_0040 0.84 +0.3 41,558 - -2.1 41,681 - +2.9 41,716 + B158DRAFT_0041 0.14 -1.0 41,724 - B158DRAFT_0041 0.17 -1.6 41,734 - B158DRAFT_0041 0.21 -0.6 41,748 + B158DRAFT_0041 0.27 +1.8 41,843 + B158DRAFT_0041 0.65 +0.2 41,851 - B158DRAFT_0041 0.68 -1.6 41,851 - B158DRAFT_0041 0.68 -0.7 41,878 + B158DRAFT_0041 0.79 -2.1 41,886 - B158DRAFT_0041 0.82 +0.6 41,886 - B158DRAFT_0041 0.82 -2.7 41,891 - B158DRAFT_0041 0.84 -0.7 41,946 - -0.1 42,223 - B158DRAFT_0042 0.34 -0.5 42,253 + B158DRAFT_0042 0.38 -1.5 42,283 + B158DRAFT_0042 0.42 +0.1 42,511 + B158DRAFT_0042 0.73 +0.0 42,519 - B158DRAFT_0042 0.74 -0.4 42,521 + B158DRAFT_0042 0.75 -2.0 42,529 - B158DRAFT_0042 0.76 +0.3 42,529 - B158DRAFT_0042 0.76 -0.9 42,561 - B158DRAFT_0042 0.80 -0.8 42,563 + B158DRAFT_0042 0.80 -1.1 42,571 - B158DRAFT_0042 0.81 -0.9 42,571 - B158DRAFT_0042 0.81 -1.0 42,586 - B158DRAFT_0042 0.83 -0.5 42,656 - +0.6 42,656 - -0.1
Or see this region's nucleotide sequence