Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1965

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1963 and B158DRAFT_1964 are separated by 71 nucleotidesB158DRAFT_1964 and B158DRAFT_1965 are separated by 209 nucleotidesB158DRAFT_1965 and B158DRAFT_1966 are separated by 445 nucleotides B158DRAFT_1963: B158DRAFT_1963 - Saccharopine dehydrogenase and related proteins, at 97,433 to 98,548 _1963 B158DRAFT_1964: B158DRAFT_1964 - elongation factor P-like protein YeiP, at 98,620 to 99,189 _1964 B158DRAFT_1965: B158DRAFT_1965 - Carboxypeptidase C (cathepsin A), at 99,399 to 100,889 _1965 B158DRAFT_1966: B158DRAFT_1966 - cytochrome c oxidase, cbb3-type, subunit I, at 101,335 to 102,768 _1966 Position (kb) 99 100 101Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 98.404 kb on + strand, within B158DRAFT_1963at 98.499 kb on - strandat 98.617 kb on + strandat 98.625 kb on - strandat 98.667 kb on - strandat 98.712 kb on - strand, within B158DRAFT_1964at 98.729 kb on + strand, within B158DRAFT_1964at 98.734 kb on + strand, within B158DRAFT_1964at 98.833 kb on + strand, within B158DRAFT_1964at 98.860 kb on - strand, within B158DRAFT_1964at 98.916 kb on - strand, within B158DRAFT_1964at 98.960 kb on + strand, within B158DRAFT_1964at 99.007 kb on - strand, within B158DRAFT_1964at 99.025 kb on - strand, within B158DRAFT_1964at 99.025 kb on - strand, within B158DRAFT_1964at 99.111 kb on + strand, within B158DRAFT_1964at 99.119 kb on - strand, within B158DRAFT_1964at 99.153 kb on - strandat 99.166 kb on - strandat 99.249 kb on + strandat 99.290 kb on - strandat 99.348 kb on - strandat 99.351 kb on + strandat 99.351 kb on + strandat 99.351 kb on + strandat 99.359 kb on - strandat 99.359 kb on - strandat 99.366 kb on - strandat 99.372 kb on + strandat 99.425 kb on - strandat 99.479 kb on - strandat 99.507 kb on + strandat 99.518 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.543 kb on + strandat 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.551 kb on - strand, within B158DRAFT_1965at 99.561 kb on + strand, within B158DRAFT_1965at 99.603 kb on - strand, within B158DRAFT_1965at 99.608 kb on + strand, within B158DRAFT_1965at 99.628 kb on + strand, within B158DRAFT_1965at 99.634 kb on - strand, within B158DRAFT_1965at 99.634 kb on - strand, within B158DRAFT_1965at 99.722 kb on + strand, within B158DRAFT_1965at 99.730 kb on - strand, within B158DRAFT_1965at 99.822 kb on + strand, within B158DRAFT_1965at 99.836 kb on + strand, within B158DRAFT_1965at 99.844 kb on - strand, within B158DRAFT_1965at 99.844 kb on - strand, within B158DRAFT_1965at 99.844 kb on - strand, within B158DRAFT_1965at 99.967 kb on - strand, within B158DRAFT_1965at 100.006 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.007 kb on + strand, within B158DRAFT_1965at 100.013 kb on + strand, within B158DRAFT_1965at 100.015 kb on - strand, within B158DRAFT_1965at 100.015 kb on - strand, within B158DRAFT_1965at 100.037 kb on + strand, within B158DRAFT_1965at 100.052 kb on + strand, within B158DRAFT_1965at 100.078 kb on - strand, within B158DRAFT_1965at 100.078 kb on - strand, within B158DRAFT_1965at 100.078 kb on - strand, within B158DRAFT_1965at 100.136 kb on + strand, within B158DRAFT_1965at 100.144 kb on - strand, within B158DRAFT_1965at 100.167 kb on + strand, within B158DRAFT_1965at 100.226 kb on - strand, within B158DRAFT_1965at 100.257 kb on - strand, within B158DRAFT_1965at 100.257 kb on - strand, within B158DRAFT_1965at 100.262 kb on - strand, within B158DRAFT_1965at 100.262 kb on - strand, within B158DRAFT_1965at 100.266 kb on + strand, within B158DRAFT_1965at 100.272 kb on + strand, within B158DRAFT_1965at 100.348 kb on - strand, within B158DRAFT_1965at 100.351 kb on + strand, within B158DRAFT_1965at 100.389 kb on + strand, within B158DRAFT_1965at 100.399 kb on + strand, within B158DRAFT_1965at 100.407 kb on - strand, within B158DRAFT_1965at 100.420 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.437 kb on + strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.445 kb on - strand, within B158DRAFT_1965at 100.447 kb on + strand, within B158DRAFT_1965at 100.450 kb on - strand, within B158DRAFT_1965at 100.455 kb on - strand, within B158DRAFT_1965at 100.455 kb on - strand, within B158DRAFT_1965at 100.536 kb on + strand, within B158DRAFT_1965at 100.662 kb on + strand, within B158DRAFT_1965at 100.735 kb on + strand, within B158DRAFT_1965at 100.851 kb on + strandat 100.851 kb on + strandat 100.859 kb on - strandat 100.859 kb on - strandat 100.866 kb on - strandat 101.126 kb on + strandat 101.144 kb on - strandat 101.167 kb on - strandat 101.188 kb on - strandat 101.217 kb on + strandat 101.217 kb on + strandat 101.225 kb on - strandat 101.225 kb on - strandat 101.230 kb on - strandat 101.285 kb on + strandat 101.332 kb on + strandat 101.436 kb on - strandat 101.480 kb on + strand, within B158DRAFT_1966at 101.488 kb on - strand, within B158DRAFT_1966at 101.488 kb on - strand, within B158DRAFT_1966at 101.488 kb on - strand, within B158DRAFT_1966at 101.488 kb on - strand, within B158DRAFT_1966at 101.564 kb on + strand, within B158DRAFT_1966at 101.576 kb on + strand, within B158DRAFT_1966at 101.581 kb on + strand, within B158DRAFT_1966at 101.599 kb on + strand, within B158DRAFT_1966at 101.599 kb on + strand, within B158DRAFT_1966at 101.682 kb on + strand, within B158DRAFT_1966at 101.682 kb on + strand, within B158DRAFT_1966at 101.682 kb on + strand, within B158DRAFT_1966at 101.682 kb on + strand, within B158DRAFT_1966at 101.682 kb on + strand, within B158DRAFT_1966at 101.684 kb on - strand, within B158DRAFT_1966at 101.690 kb on - strand, within B158DRAFT_1966at 101.690 kb on - strand, within B158DRAFT_1966at 101.690 kb on - strand, within B158DRAFT_1966at 101.690 kb on - strand, within B158DRAFT_1966at 101.691 kb on - strand, within B158DRAFT_1966at 101.691 kb on - strand, within B158DRAFT_1966at 101.691 kb on - strand, within B158DRAFT_1966at 101.745 kb on + strand, within B158DRAFT_1966at 101.753 kb on - strand, within B158DRAFT_1966at 101.758 kb on - strand, within B158DRAFT_1966at 101.764 kb on + strand, within B158DRAFT_1966at 101.772 kb on - strand, within B158DRAFT_1966at 101.780 kb on + strand, within B158DRAFT_1966at 101.788 kb on - strand, within B158DRAFT_1966at 101.798 kb on - strand, within B158DRAFT_1966at 101.798 kb on - strand, within B158DRAFT_1966at 101.805 kb on + strand, within B158DRAFT_1966at 101.862 kb on - strand, within B158DRAFT_1966at 101.862 kb on - strand, within B158DRAFT_1966

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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98,404 + B158DRAFT_1963 0.87 +0.6
98,499 - -0.9
98,617 + -0.9
98,625 - +0.6
98,667 - -0.3
98,712 - B158DRAFT_1964 0.16 +1.2
98,729 + B158DRAFT_1964 0.19 +0.7
98,734 + B158DRAFT_1964 0.20 +0.7
98,833 + B158DRAFT_1964 0.37 -0.0
98,860 - B158DRAFT_1964 0.42 +0.1
98,916 - B158DRAFT_1964 0.52 -0.9
98,960 + B158DRAFT_1964 0.60 -1.1
99,007 - B158DRAFT_1964 0.68 -0.1
99,025 - B158DRAFT_1964 0.71 -3.2
99,025 - B158DRAFT_1964 0.71 +0.1
99,111 + B158DRAFT_1964 0.86 +0.5
99,119 - B158DRAFT_1964 0.88 +1.1
99,153 - -0.0
99,166 - -0.6
99,249 + -0.3
99,290 - +1.3
99,348 - +0.9
99,351 + -0.5
99,351 + +0.2
99,351 + -0.4
99,359 - -1.3
99,359 - -0.1
99,366 - +0.5
99,372 + -1.3
99,425 - -2.2
99,479 - +0.6
99,507 + +0.3
99,518 + -0.3
99,543 + +0.1
99,543 + -0.7
99,543 + -0.1
99,543 + +0.2
99,543 + +0.0
99,543 + -0.2
99,543 + -0.8
99,551 - B158DRAFT_1965 0.10 -0.0
99,551 - B158DRAFT_1965 0.10 +0.1
99,551 - B158DRAFT_1965 0.10 -1.4
99,551 - B158DRAFT_1965 0.10 -1.8
99,551 - B158DRAFT_1965 0.10 -1.0
99,551 - B158DRAFT_1965 0.10 -0.6
99,551 - B158DRAFT_1965 0.10 -1.9
99,551 - B158DRAFT_1965 0.10 -0.2
99,561 + B158DRAFT_1965 0.11 -1.1
99,603 - B158DRAFT_1965 0.14 +0.4
99,608 + B158DRAFT_1965 0.14 +0.0
99,628 + B158DRAFT_1965 0.15 -0.6
99,634 - B158DRAFT_1965 0.16 -0.1
99,634 - B158DRAFT_1965 0.16 +0.0
99,722 + B158DRAFT_1965 0.22 +1.0
99,730 - B158DRAFT_1965 0.22 -0.6
99,822 + B158DRAFT_1965 0.28 -0.3
99,836 + B158DRAFT_1965 0.29 -0.9
99,844 - B158DRAFT_1965 0.30 -1.9
99,844 - B158DRAFT_1965 0.30 -1.2
99,844 - B158DRAFT_1965 0.30 -0.1
99,967 - B158DRAFT_1965 0.38 -0.2
100,006 + B158DRAFT_1965 0.41 -2.6
100,007 + B158DRAFT_1965 0.41 +0.4
100,007 + B158DRAFT_1965 0.41 +0.0
100,007 + B158DRAFT_1965 0.41 -0.3
100,007 + B158DRAFT_1965 0.41 -0.8
100,007 + B158DRAFT_1965 0.41 -1.9
100,007 + B158DRAFT_1965 0.41 -1.8
100,007 + B158DRAFT_1965 0.41 -0.6
100,013 + B158DRAFT_1965 0.41 -1.6
100,015 - B158DRAFT_1965 0.41 -0.6
100,015 - B158DRAFT_1965 0.41 -0.9
100,037 + B158DRAFT_1965 0.43 -0.5
100,052 + B158DRAFT_1965 0.44 -0.6
100,078 - B158DRAFT_1965 0.46 -0.8
100,078 - B158DRAFT_1965 0.46 +0.5
100,078 - B158DRAFT_1965 0.46 -0.3
100,136 + B158DRAFT_1965 0.49 -0.4
100,144 - B158DRAFT_1965 0.50 -0.7
100,167 + B158DRAFT_1965 0.52 +0.3
100,226 - B158DRAFT_1965 0.55 -1.2
100,257 - B158DRAFT_1965 0.58 +0.6
100,257 - B158DRAFT_1965 0.58 +0.3
100,262 - B158DRAFT_1965 0.58 -0.3
100,262 - B158DRAFT_1965 0.58 -0.3
100,266 + B158DRAFT_1965 0.58 -1.8
100,272 + B158DRAFT_1965 0.59 +0.1
100,348 - B158DRAFT_1965 0.64 -1.2
100,351 + B158DRAFT_1965 0.64 -0.4
100,389 + B158DRAFT_1965 0.66 -0.4
100,399 + B158DRAFT_1965 0.67 -1.1
100,407 - B158DRAFT_1965 0.68 -1.8
100,420 + B158DRAFT_1965 0.68 +0.2
100,437 + B158DRAFT_1965 0.70 -0.1
100,437 + B158DRAFT_1965 0.70 +0.6
100,437 + B158DRAFT_1965 0.70 -0.5
100,437 + B158DRAFT_1965 0.70 -0.3
100,437 + B158DRAFT_1965 0.70 -0.5
100,437 + B158DRAFT_1965 0.70 -0.7
100,437 + B158DRAFT_1965 0.70 -0.2
100,437 + B158DRAFT_1965 0.70 -0.7
100,437 + B158DRAFT_1965 0.70 -1.0
100,437 + B158DRAFT_1965 0.70 +0.3
100,437 + B158DRAFT_1965 0.70 -0.3
100,437 + B158DRAFT_1965 0.70 -2.1
100,437 + B158DRAFT_1965 0.70 +1.0
100,437 + B158DRAFT_1965 0.70 -0.2
100,437 + B158DRAFT_1965 0.70 -1.4
100,445 - B158DRAFT_1965 0.70 -1.5
100,445 - B158DRAFT_1965 0.70 +0.4
100,445 - B158DRAFT_1965 0.70 +0.4
100,445 - B158DRAFT_1965 0.70 -0.4
100,445 - B158DRAFT_1965 0.70 -1.3
100,445 - B158DRAFT_1965 0.70 -2.8
100,445 - B158DRAFT_1965 0.70 +0.0
100,445 - B158DRAFT_1965 0.70 -1.5
100,445 - B158DRAFT_1965 0.70 -1.3
100,445 - B158DRAFT_1965 0.70 +0.4
100,445 - B158DRAFT_1965 0.70 -0.2
100,447 + B158DRAFT_1965 0.70 -0.3
100,450 - B158DRAFT_1965 0.70 -1.9
100,455 - B158DRAFT_1965 0.71 -0.6
100,455 - B158DRAFT_1965 0.71 +0.1
100,536 + B158DRAFT_1965 0.76 -0.1
100,662 + B158DRAFT_1965 0.85 -0.5
100,735 + B158DRAFT_1965 0.90 -1.7
100,851 + +0.3
100,851 + -0.4
100,859 - -0.6
100,859 - -0.2
100,866 - -0.4
101,126 + +0.4
101,144 - +0.2
101,167 - +0.2
101,188 - -0.2
101,217 + -0.3
101,217 + +0.6
101,225 - +0.5
101,225 - +0.6
101,230 - +0.5
101,285 + -0.1
101,332 + +0.1
101,436 - +0.3
101,480 + B158DRAFT_1966 0.10 +0.9
101,488 - B158DRAFT_1966 0.11 +0.0
101,488 - B158DRAFT_1966 0.11 +0.3
101,488 - B158DRAFT_1966 0.11 -0.0
101,488 - B158DRAFT_1966 0.11 +0.6
101,564 + B158DRAFT_1966 0.16 +2.6
101,576 + B158DRAFT_1966 0.17 -0.0
101,581 + B158DRAFT_1966 0.17 +0.1
101,599 + B158DRAFT_1966 0.18 +0.2
101,599 + B158DRAFT_1966 0.18 +0.6
101,682 + B158DRAFT_1966 0.24 +0.6
101,682 + B158DRAFT_1966 0.24 +0.6
101,682 + B158DRAFT_1966 0.24 -0.6
101,682 + B158DRAFT_1966 0.24 -0.9
101,682 + B158DRAFT_1966 0.24 +0.2
101,684 - B158DRAFT_1966 0.24 -0.0
101,690 - B158DRAFT_1966 0.25 +0.3
101,690 - B158DRAFT_1966 0.25 +0.4
101,690 - B158DRAFT_1966 0.25 +0.4
101,690 - B158DRAFT_1966 0.25 +0.7
101,691 - B158DRAFT_1966 0.25 -0.2
101,691 - B158DRAFT_1966 0.25 -0.1
101,691 - B158DRAFT_1966 0.25 +0.3
101,745 + B158DRAFT_1966 0.29 +1.0
101,753 - B158DRAFT_1966 0.29 -0.1
101,758 - B158DRAFT_1966 0.29 +0.4
101,764 + B158DRAFT_1966 0.30 +0.7
101,772 - B158DRAFT_1966 0.30 +0.9
101,780 + B158DRAFT_1966 0.31 +0.6
101,788 - B158DRAFT_1966 0.32 +0.6
101,798 - B158DRAFT_1966 0.32 -0.5
101,798 - B158DRAFT_1966 0.32 +0.2
101,805 + B158DRAFT_1966 0.33 +1.2
101,862 - B158DRAFT_1966 0.37 +0.4
101,862 - B158DRAFT_1966 0.37 -0.2

Or see this region's nucleotide sequence