Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1934

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1933 and B158DRAFT_1934 are separated by 209 nucleotidesB158DRAFT_1934 and B158DRAFT_1935 overlap by 8 nucleotidesB158DRAFT_1935 and B158DRAFT_1936 are separated by 13 nucleotidesB158DRAFT_1936 and B158DRAFT_1937 are separated by 24 nucleotides B158DRAFT_1933: B158DRAFT_1933 - Outer membrane receptor for Fe3+-dicitrate, at 68,081 to 70,303 _1933 B158DRAFT_1934: B158DRAFT_1934 - Protein of unknown function (DUF2889)., at 70,513 to 71,088 _1934 B158DRAFT_1935: B158DRAFT_1935 - Uncharacterized protein conserved in bacteria, at 71,081 to 71,419 _1935 B158DRAFT_1936: B158DRAFT_1936 - transcriptional regulator, TraR/DksA family, at 71,433 to 71,804 _1936 B158DRAFT_1937: B158DRAFT_1937 - O-6-methylguanine DNA methyltransferase, at 71,829 to 72,236 _1937 Position (kb) 70 71 72Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 69.520 kb on - strand, within B158DRAFT_1933at 69.533 kb on + strand, within B158DRAFT_1933at 69.599 kb on + strand, within B158DRAFT_1933at 69.599 kb on + strand, within B158DRAFT_1933at 69.600 kb on - strand, within B158DRAFT_1933at 69.627 kb on + strand, within B158DRAFT_1933at 69.643 kb on + strand, within B158DRAFT_1933at 69.643 kb on + strand, within B158DRAFT_1933at 69.651 kb on - strand, within B158DRAFT_1933at 69.662 kb on + strand, within B158DRAFT_1933at 69.736 kb on - strand, within B158DRAFT_1933at 69.799 kb on + strand, within B158DRAFT_1933at 69.838 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.867 kb on + strand, within B158DRAFT_1933at 69.875 kb on - strand, within B158DRAFT_1933at 69.875 kb on - strand, within B158DRAFT_1933at 69.998 kb on + strand, within B158DRAFT_1933at 70.006 kb on - strand, within B158DRAFT_1933at 70.009 kb on - strand, within B158DRAFT_1933at 70.045 kb on - strand, within B158DRAFT_1933at 70.050 kb on - strand, within B158DRAFT_1933at 70.070 kb on + strand, within B158DRAFT_1933at 70.072 kb on + strand, within B158DRAFT_1933at 70.078 kb on - strand, within B158DRAFT_1933at 70.078 kb on - strand, within B158DRAFT_1933at 70.313 kb on + strandat 70.321 kb on - strandat 70.388 kb on - strandat 70.409 kb on + strandat 70.612 kb on + strand, within B158DRAFT_1934at 70.623 kb on + strand, within B158DRAFT_1934at 70.688 kb on + strand, within B158DRAFT_1934at 70.696 kb on - strand, within B158DRAFT_1934at 70.696 kb on - strand, within B158DRAFT_1934at 70.750 kb on - strand, within B158DRAFT_1934at 70.799 kb on - strand, within B158DRAFT_1934at 70.800 kb on + strand, within B158DRAFT_1934at 70.808 kb on - strand, within B158DRAFT_1934at 70.808 kb on - strand, within B158DRAFT_1934at 70.815 kb on - strand, within B158DRAFT_1934at 70.840 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.859 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.861 kb on + strand, within B158DRAFT_1934at 70.867 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.869 kb on - strand, within B158DRAFT_1934at 70.871 kb on + strand, within B158DRAFT_1934at 70.871 kb on + strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 70.879 kb on - strand, within B158DRAFT_1934at 71.145 kb on - strand, within B158DRAFT_1935at 71.235 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.351 kb on + strand, within B158DRAFT_1935at 71.359 kb on - strand, within B158DRAFT_1935at 71.459 kb on + strandat 71.459 kb on + strandat 71.459 kb on + strandat 71.510 kb on - strand, within B158DRAFT_1936at 71.512 kb on + strand, within B158DRAFT_1936at 71.583 kb on - strand, within B158DRAFT_1936at 71.600 kb on + strand, within B158DRAFT_1936at 71.610 kb on + strand, within B158DRAFT_1936at 71.618 kb on - strand, within B158DRAFT_1936at 71.755 kb on - strand, within B158DRAFT_1936at 71.799 kb on - strandat 71.841 kb on + strandat 71.884 kb on - strand, within B158DRAFT_1937at 71.902 kb on + strand, within B158DRAFT_1937at 71.910 kb on - strand, within B158DRAFT_1937at 71.910 kb on - strand, within B158DRAFT_1937at 71.951 kb on + strand, within B158DRAFT_1937at 71.998 kb on + strand, within B158DRAFT_1937at 71.998 kb on + strand, within B158DRAFT_1937at 72.001 kb on - strand, within B158DRAFT_1937at 72.008 kb on + strand, within B158DRAFT_1937at 72.008 kb on + strand, within B158DRAFT_1937at 72.016 kb on - strand, within B158DRAFT_1937at 72.020 kb on - strand, within B158DRAFT_1937at 72.023 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.045 kb on + strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.053 kb on - strand, within B158DRAFT_1937at 72.070 kb on - strand, within B158DRAFT_1937

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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69,520 - B158DRAFT_1933 0.65 -0.7
69,533 + B158DRAFT_1933 0.65 -0.8
69,599 + B158DRAFT_1933 0.68 -1.1
69,599 + B158DRAFT_1933 0.68 +0.2
69,600 - B158DRAFT_1933 0.68 +0.7
69,627 + B158DRAFT_1933 0.70 -0.6
69,643 + B158DRAFT_1933 0.70 -1.1
69,643 + B158DRAFT_1933 0.70 -1.0
69,651 - B158DRAFT_1933 0.71 -1.2
69,662 + B158DRAFT_1933 0.71 +0.6
69,736 - B158DRAFT_1933 0.74 -1.0
69,799 + B158DRAFT_1933 0.77 -0.6
69,838 + B158DRAFT_1933 0.79 -2.4
69,867 + B158DRAFT_1933 0.80 -0.6
69,867 + B158DRAFT_1933 0.80 -0.6
69,867 + B158DRAFT_1933 0.80 -0.9
69,867 + B158DRAFT_1933 0.80 -1.1
69,867 + B158DRAFT_1933 0.80 -1.1
69,867 + B158DRAFT_1933 0.80 -1.4
69,875 - B158DRAFT_1933 0.81 -0.2
69,875 - B158DRAFT_1933 0.81 -0.1
69,998 + B158DRAFT_1933 0.86 -1.2
70,006 - B158DRAFT_1933 0.87 -0.2
70,009 - B158DRAFT_1933 0.87 -0.3
70,045 - B158DRAFT_1933 0.88 -1.7
70,050 - B158DRAFT_1933 0.89 -1.5
70,070 + B158DRAFT_1933 0.89 +0.1
70,072 + B158DRAFT_1933 0.90 -0.9
70,078 - B158DRAFT_1933 0.90 -1.7
70,078 - B158DRAFT_1933 0.90 -0.7
70,313 + -1.0
70,321 - -1.0
70,388 - -1.8
70,409 + -3.9
70,612 + B158DRAFT_1934 0.17 -1.9
70,623 + B158DRAFT_1934 0.19 +0.4
70,688 + B158DRAFT_1934 0.30 -0.6
70,696 - B158DRAFT_1934 0.32 -1.1
70,696 - B158DRAFT_1934 0.32 -0.2
70,750 - B158DRAFT_1934 0.41 -0.1
70,799 - B158DRAFT_1934 0.50 -0.4
70,800 + B158DRAFT_1934 0.50 -0.0
70,808 - B158DRAFT_1934 0.51 -0.6
70,808 - B158DRAFT_1934 0.51 -1.6
70,815 - B158DRAFT_1934 0.52 -0.3
70,840 + B158DRAFT_1934 0.57 +1.0
70,859 + B158DRAFT_1934 0.60 +0.3
70,859 + B158DRAFT_1934 0.60 -0.1
70,859 + B158DRAFT_1934 0.60 +0.4
70,859 + B158DRAFT_1934 0.60 +0.1
70,861 + B158DRAFT_1934 0.60 -1.2
70,861 + B158DRAFT_1934 0.60 +0.2
70,861 + B158DRAFT_1934 0.60 -1.9
70,861 + B158DRAFT_1934 0.60 +0.9
70,867 - B158DRAFT_1934 0.61 +1.3
70,869 - B158DRAFT_1934 0.62 -0.4
70,869 - B158DRAFT_1934 0.62 -0.7
70,869 - B158DRAFT_1934 0.62 +1.0
70,869 - B158DRAFT_1934 0.62 +0.9
70,869 - B158DRAFT_1934 0.62 -0.7
70,869 - B158DRAFT_1934 0.62 +0.9
70,871 + B158DRAFT_1934 0.62 -0.3
70,871 + B158DRAFT_1934 0.62 +0.7
70,879 - B158DRAFT_1934 0.64 +1.5
70,879 - B158DRAFT_1934 0.64 -0.1
70,879 - B158DRAFT_1934 0.64 -1.0
71,145 - B158DRAFT_1935 0.19 -2.5
71,235 + B158DRAFT_1935 0.45 +1.5
71,351 + B158DRAFT_1935 0.80 +0.6
71,351 + B158DRAFT_1935 0.80 +1.0
71,351 + B158DRAFT_1935 0.80 +1.2
71,359 - B158DRAFT_1935 0.82 +1.6
71,459 + -2.0
71,459 + -1.4
71,459 + -0.9
71,510 - B158DRAFT_1936 0.21 -0.5
71,512 + B158DRAFT_1936 0.21 -0.3
71,583 - B158DRAFT_1936 0.40 +0.0
71,600 + B158DRAFT_1936 0.45 -0.6
71,610 + B158DRAFT_1936 0.48 +0.9
71,618 - B158DRAFT_1936 0.50 +0.1
71,755 - B158DRAFT_1936 0.87 +0.5
71,799 - +1.1
71,841 + -1.0
71,884 - B158DRAFT_1937 0.13 -0.2
71,902 + B158DRAFT_1937 0.18 +1.4
71,910 - B158DRAFT_1937 0.20 +1.8
71,910 - B158DRAFT_1937 0.20 -0.6
71,951 + B158DRAFT_1937 0.30 -0.5
71,998 + B158DRAFT_1937 0.41 -0.9
71,998 + B158DRAFT_1937 0.41 -0.2
72,001 - B158DRAFT_1937 0.42 -0.0
72,008 + B158DRAFT_1937 0.44 -0.6
72,008 + B158DRAFT_1937 0.44 -0.4
72,016 - B158DRAFT_1937 0.46 -1.4
72,020 - B158DRAFT_1937 0.47 +0.1
72,023 + B158DRAFT_1937 0.48 -0.3
72,045 + B158DRAFT_1937 0.53 -0.4
72,045 + B158DRAFT_1937 0.53 -0.8
72,045 + B158DRAFT_1937 0.53 +0.3
72,045 + B158DRAFT_1937 0.53 -0.7
72,045 + B158DRAFT_1937 0.53 -0.6
72,045 + B158DRAFT_1937 0.53 +0.0
72,045 + B158DRAFT_1937 0.53 -0.3
72,053 - B158DRAFT_1937 0.55 -0.7
72,053 - B158DRAFT_1937 0.55 -1.2
72,053 - B158DRAFT_1937 0.55 +0.2
72,070 - B158DRAFT_1937 0.59 +0.3

Or see this region's nucleotide sequence