Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1821 and B158DRAFT_1822 are separated by 92 nucleotides B158DRAFT_1822 and B158DRAFT_1823 are separated by 141 nucleotides
B158DRAFT_1821: B158DRAFT_1821 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 1,919,708 to 1,922,047
_1821
B158DRAFT_1822: B158DRAFT_1822 - Transcriptional regulators, at 1,922,140 to 1,922,637
_1822
B158DRAFT_1823: B158DRAFT_1823 - alanine dehydrogenase, at 1,922,779 to 1,923,912
_1823
Position (kb)
1922
1923 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1921.173 kb on - strand, within B158DRAFT_1821 at 1921.251 kb on + strand, within B158DRAFT_1821 at 1921.259 kb on - strand, within B158DRAFT_1821 at 1921.259 kb on - strand, within B158DRAFT_1821 at 1921.263 kb on + strand, within B158DRAFT_1821 at 1921.263 kb on + strand, within B158DRAFT_1821 at 1921.263 kb on + strand, within B158DRAFT_1821 at 1921.271 kb on - strand, within B158DRAFT_1821 at 1921.271 kb on - strand, within B158DRAFT_1821 at 1921.271 kb on - strand, within B158DRAFT_1821 at 1921.279 kb on + strand, within B158DRAFT_1821 at 1921.293 kb on - strand, within B158DRAFT_1821 at 1921.298 kb on - strand, within B158DRAFT_1821 at 1921.322 kb on - strand, within B158DRAFT_1821 at 1921.333 kb on - strand, within B158DRAFT_1821 at 1921.340 kb on + strand, within B158DRAFT_1821 at 1921.348 kb on - strand, within B158DRAFT_1821 at 1921.391 kb on - strand, within B158DRAFT_1821 at 1921.391 kb on - strand, within B158DRAFT_1821 at 1921.425 kb on + strand, within B158DRAFT_1821 at 1921.543 kb on + strand, within B158DRAFT_1821 at 1921.551 kb on - strand, within B158DRAFT_1821 at 1921.551 kb on - strand, within B158DRAFT_1821 at 1921.551 kb on - strand, within B158DRAFT_1821 at 1921.551 kb on - strand, within B158DRAFT_1821 at 1921.615 kb on - strand, within B158DRAFT_1821 at 1921.635 kb on + strand, within B158DRAFT_1821 at 1921.640 kb on + strand, within B158DRAFT_1821 at 1921.643 kb on - strand, within B158DRAFT_1821 at 1921.643 kb on - strand, within B158DRAFT_1821 at 1921.646 kb on - strand, within B158DRAFT_1821 at 1921.646 kb on - strand, within B158DRAFT_1821 at 1921.648 kb on - strand, within B158DRAFT_1821 at 1921.648 kb on - strand, within B158DRAFT_1821 at 1921.653 kb on - strand, within B158DRAFT_1821 at 1921.653 kb on - strand, within B158DRAFT_1821 at 1921.653 kb on - strand, within B158DRAFT_1821 at 1921.661 kb on - strand, within B158DRAFT_1821 at 1921.666 kb on - strand, within B158DRAFT_1821 at 1921.700 kb on - strand, within B158DRAFT_1821 at 1921.978 kb on + strand at 1921.978 kb on + strand at 1921.986 kb on - strand at 1921.986 kb on - strand at 1921.986 kb on - strand at 1921.991 kb on - strand at 1921.991 kb on - strand at 1921.991 kb on - strand at 1921.991 kb on - strand at 1922.096 kb on + strand at 1922.096 kb on + strand at 1922.096 kb on + strand at 1922.104 kb on - strand at 1922.120 kb on + strand at 1922.177 kb on + strand at 1922.213 kb on + strand, within B158DRAFT_1822 at 1922.221 kb on - strand, within B158DRAFT_1822 at 1922.221 kb on - strand, within B158DRAFT_1822 at 1922.334 kb on - strand, within B158DRAFT_1822 at 1922.419 kb on + strand, within B158DRAFT_1822 at 1922.427 kb on - strand, within B158DRAFT_1822 at 1922.451 kb on + strand, within B158DRAFT_1822 at 1922.451 kb on + strand, within B158DRAFT_1822 at 1922.456 kb on + strand, within B158DRAFT_1822 at 1922.459 kb on - strand, within B158DRAFT_1822 at 1922.489 kb on + strand, within B158DRAFT_1822 at 1922.497 kb on - strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.499 kb on + strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.507 kb on - strand, within B158DRAFT_1822 at 1922.511 kb on + strand, within B158DRAFT_1822 at 1922.511 kb on + strand, within B158DRAFT_1822 at 1922.512 kb on - strand, within B158DRAFT_1822 at 1922.519 kb on - strand, within B158DRAFT_1822 at 1922.587 kb on + strand, within B158DRAFT_1822 at 1922.592 kb on + strand at 1922.592 kb on + strand at 1922.592 kb on + strand at 1922.600 kb on - strand at 1922.600 kb on - strand at 1922.600 kb on - strand at 1922.600 kb on - strand at 1922.600 kb on - strand at 1922.600 kb on - strand at 1922.792 kb on - strand at 1922.837 kb on + strand at 1922.860 kb on + strand at 1923.029 kb on - strand, within B158DRAFT_1823 at 1923.040 kb on + strand, within B158DRAFT_1823 at 1923.040 kb on + strand, within B158DRAFT_1823 at 1923.059 kb on + strand, within B158DRAFT_1823 at 1923.068 kb on - strand, within B158DRAFT_1823 at 1923.068 kb on - strand, within B158DRAFT_1823 at 1923.070 kb on + strand, within B158DRAFT_1823 at 1923.099 kb on + strand, within B158DRAFT_1823 at 1923.099 kb on + strand, within B158DRAFT_1823 at 1923.114 kb on + strand, within B158DRAFT_1823 at 1923.124 kb on + strand, within B158DRAFT_1823 at 1923.124 kb on + strand, within B158DRAFT_1823 at 1923.132 kb on - strand, within B158DRAFT_1823 at 1923.173 kb on - strand, within B158DRAFT_1823 at 1923.207 kb on + strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.229 kb on - strand, within B158DRAFT_1823 at 1923.231 kb on + strand, within B158DRAFT_1823 at 1923.231 kb on + strand, within B158DRAFT_1823 at 1923.231 kb on + strand, within B158DRAFT_1823 at 1923.239 kb on - strand, within B158DRAFT_1823 at 1923.239 kb on - strand, within B158DRAFT_1823 at 1923.239 kb on - strand, within B158DRAFT_1823 at 1923.358 kb on - strand, within B158DRAFT_1823 at 1923.420 kb on + strand, within B158DRAFT_1823 at 1923.422 kb on + strand, within B158DRAFT_1823 at 1923.428 kb on - strand, within B158DRAFT_1823 at 1923.448 kb on - strand, within B158DRAFT_1823 at 1923.548 kb on - strand, within B158DRAFT_1823 at 1923.550 kb on + strand, within B158DRAFT_1823 at 1923.555 kb on + strand, within B158DRAFT_1823 at 1923.555 kb on + strand, within B158DRAFT_1823 at 1923.563 kb on - strand, within B158DRAFT_1823 at 1923.565 kb on + strand, within B158DRAFT_1823 at 1923.568 kb on - strand, within B158DRAFT_1823 at 1923.573 kb on - strand, within B158DRAFT_1823 at 1923.591 kb on + strand, within B158DRAFT_1823 at 1923.599 kb on - strand, within B158DRAFT_1823 at 1923.616 kb on - strand, within B158DRAFT_1823 at 1923.617 kb on + strand, within B158DRAFT_1823 at 1923.625 kb on - strand, within B158DRAFT_1823
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 1,921,173 - B158DRAFT_1821 0.63 -1.5 1,921,251 + B158DRAFT_1821 0.66 +1.3 1,921,259 - B158DRAFT_1821 0.66 -1.0 1,921,259 - B158DRAFT_1821 0.66 +0.9 1,921,263 + B158DRAFT_1821 0.66 -0.5 1,921,263 + B158DRAFT_1821 0.66 +0.9 1,921,263 + B158DRAFT_1821 0.66 -1.2 1,921,271 - B158DRAFT_1821 0.67 -0.6 1,921,271 - B158DRAFT_1821 0.67 -0.2 1,921,271 - B158DRAFT_1821 0.67 -2.1 1,921,279 + B158DRAFT_1821 0.67 +0.7 1,921,293 - B158DRAFT_1821 0.68 +0.4 1,921,298 - B158DRAFT_1821 0.68 +0.3 1,921,322 - B158DRAFT_1821 0.69 -1.0 1,921,333 - B158DRAFT_1821 0.69 +0.7 1,921,340 + B158DRAFT_1821 0.70 -1.8 1,921,348 - B158DRAFT_1821 0.70 -1.8 1,921,391 - B158DRAFT_1821 0.72 +0.7 1,921,391 - B158DRAFT_1821 0.72 +0.6 1,921,425 + B158DRAFT_1821 0.73 -1.0 1,921,543 + B158DRAFT_1821 0.78 -1.1 1,921,551 - B158DRAFT_1821 0.79 +0.4 1,921,551 - B158DRAFT_1821 0.79 +0.4 1,921,551 - B158DRAFT_1821 0.79 +1.4 1,921,551 - B158DRAFT_1821 0.79 -1.2 1,921,615 - B158DRAFT_1821 0.81 -0.4 1,921,635 + B158DRAFT_1821 0.82 -1.6 1,921,640 + B158DRAFT_1821 0.83 -1.0 1,921,643 - B158DRAFT_1821 0.83 -2.9 1,921,643 - B158DRAFT_1821 0.83 -1.9 1,921,646 - B158DRAFT_1821 0.83 -0.6 1,921,646 - B158DRAFT_1821 0.83 -1.0 1,921,648 - B158DRAFT_1821 0.83 -0.2 1,921,648 - B158DRAFT_1821 0.83 +0.8 1,921,653 - B158DRAFT_1821 0.83 -0.4 1,921,653 - B158DRAFT_1821 0.83 -1.6 1,921,653 - B158DRAFT_1821 0.83 -1.3 1,921,661 - B158DRAFT_1821 0.83 +0.0 1,921,666 - B158DRAFT_1821 0.84 +0.4 1,921,700 - B158DRAFT_1821 0.85 -1.5 1,921,978 + -1.4 1,921,978 + -0.4 1,921,986 - -1.0 1,921,986 - +1.0 1,921,986 - -0.6 1,921,991 - -1.1 1,921,991 - -0.2 1,921,991 - -0.8 1,921,991 - -1.8 1,922,096 + -1.1 1,922,096 + +1.0 1,922,096 + -0.6 1,922,104 - -0.6 1,922,120 + -2.4 1,922,177 + -0.3 1,922,213 + B158DRAFT_1822 0.15 -1.7 1,922,221 - B158DRAFT_1822 0.16 -0.7 1,922,221 - B158DRAFT_1822 0.16 -0.4 1,922,334 - B158DRAFT_1822 0.39 -2.1 1,922,419 + B158DRAFT_1822 0.56 -1.1 1,922,427 - B158DRAFT_1822 0.58 -0.3 1,922,451 + B158DRAFT_1822 0.62 +0.1 1,922,451 + B158DRAFT_1822 0.62 -0.7 1,922,456 + B158DRAFT_1822 0.63 -0.6 1,922,459 - B158DRAFT_1822 0.64 -1.0 1,922,489 + B158DRAFT_1822 0.70 -2.4 1,922,497 - B158DRAFT_1822 0.72 -1.3 1,922,499 + B158DRAFT_1822 0.72 -0.8 1,922,499 + B158DRAFT_1822 0.72 -1.5 1,922,499 + B158DRAFT_1822 0.72 -1.0 1,922,499 + B158DRAFT_1822 0.72 -0.6 1,922,499 + B158DRAFT_1822 0.72 +0.3 1,922,499 + B158DRAFT_1822 0.72 -0.0 1,922,499 + B158DRAFT_1822 0.72 -1.2 1,922,499 + B158DRAFT_1822 0.72 -0.0 1,922,499 + B158DRAFT_1822 0.72 -0.4 1,922,499 + B158DRAFT_1822 0.72 -0.7 1,922,499 + B158DRAFT_1822 0.72 -0.9 1,922,499 + B158DRAFT_1822 0.72 -0.5 1,922,499 + B158DRAFT_1822 0.72 -0.7 1,922,507 - B158DRAFT_1822 0.74 -0.1 1,922,507 - B158DRAFT_1822 0.74 -0.3 1,922,507 - B158DRAFT_1822 0.74 -0.7 1,922,507 - B158DRAFT_1822 0.74 -0.6 1,922,507 - B158DRAFT_1822 0.74 -0.8 1,922,507 - B158DRAFT_1822 0.74 -1.5 1,922,507 - B158DRAFT_1822 0.74 +0.0 1,922,507 - B158DRAFT_1822 0.74 -0.5 1,922,507 - B158DRAFT_1822 0.74 -0.6 1,922,507 - B158DRAFT_1822 0.74 -0.0 1,922,507 - B158DRAFT_1822 0.74 -0.9 1,922,511 + B158DRAFT_1822 0.74 -0.7 1,922,511 + B158DRAFT_1822 0.74 -1.1 1,922,512 - B158DRAFT_1822 0.75 -0.5 1,922,519 - B158DRAFT_1822 0.76 -1.5 1,922,587 + B158DRAFT_1822 0.90 +0.0 1,922,592 + -0.6 1,922,592 + -1.8 1,922,592 + +0.0 1,922,600 - -0.3 1,922,600 - -0.2 1,922,600 - -0.5 1,922,600 - -0.7 1,922,600 - +0.2 1,922,600 - -0.4 1,922,792 - -1.7 1,922,837 + +0.2 1,922,860 + +0.7 1,923,029 - B158DRAFT_1823 0.22 -0.7 1,923,040 + B158DRAFT_1823 0.23 +0.8 1,923,040 + B158DRAFT_1823 0.23 -0.4 1,923,059 + B158DRAFT_1823 0.25 -0.9 1,923,068 - B158DRAFT_1823 0.25 -2.3 1,923,068 - B158DRAFT_1823 0.25 -0.5 1,923,070 + B158DRAFT_1823 0.26 -0.9 1,923,099 + B158DRAFT_1823 0.28 -1.6 1,923,099 + B158DRAFT_1823 0.28 -1.7 1,923,114 + B158DRAFT_1823 0.30 -1.6 1,923,124 + B158DRAFT_1823 0.30 -0.4 1,923,124 + B158DRAFT_1823 0.30 -0.8 1,923,132 - B158DRAFT_1823 0.31 +0.3 1,923,173 - B158DRAFT_1823 0.35 -1.7 1,923,207 + B158DRAFT_1823 0.38 -1.0 1,923,229 - B158DRAFT_1823 0.40 -1.5 1,923,229 - B158DRAFT_1823 0.40 -0.8 1,923,229 - B158DRAFT_1823 0.40 +0.8 1,923,229 - B158DRAFT_1823 0.40 -0.8 1,923,229 - B158DRAFT_1823 0.40 +0.2 1,923,229 - B158DRAFT_1823 0.40 +0.6 1,923,231 + B158DRAFT_1823 0.40 -0.8 1,923,231 + B158DRAFT_1823 0.40 -0.9 1,923,231 + B158DRAFT_1823 0.40 +0.6 1,923,239 - B158DRAFT_1823 0.41 +0.5 1,923,239 - B158DRAFT_1823 0.41 +0.3 1,923,239 - B158DRAFT_1823 0.41 -0.8 1,923,358 - B158DRAFT_1823 0.51 -1.7 1,923,420 + B158DRAFT_1823 0.57 -2.0 1,923,422 + B158DRAFT_1823 0.57 -1.1 1,923,428 - B158DRAFT_1823 0.57 -0.7 1,923,448 - B158DRAFT_1823 0.59 -0.5 1,923,548 - B158DRAFT_1823 0.68 +0.5 1,923,550 + B158DRAFT_1823 0.68 -0.9 1,923,555 + B158DRAFT_1823 0.68 +0.4 1,923,555 + B158DRAFT_1823 0.68 -2.4 1,923,563 - B158DRAFT_1823 0.69 -1.2 1,923,565 + B158DRAFT_1823 0.69 -0.0 1,923,568 - B158DRAFT_1823 0.70 +1.8 1,923,573 - B158DRAFT_1823 0.70 -0.7 1,923,591 + B158DRAFT_1823 0.72 -1.3 1,923,599 - B158DRAFT_1823 0.72 +0.8 1,923,616 - B158DRAFT_1823 0.74 -0.5 1,923,617 + B158DRAFT_1823 0.74 -1.1 1,923,625 - B158DRAFT_1823 0.75 +1.8
Or see this region's nucleotide sequence