Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1464 and B158DRAFT_1465 are separated by 25 nucleotides B158DRAFT_1465 and B158DRAFT_1466 are separated by 120 nucleotides B158DRAFT_1466 and B158DRAFT_1467 are separated by 216 nucleotides B158DRAFT_1467 and B158DRAFT_1468 are separated by 84 nucleotides B158DRAFT_1468 and B158DRAFT_1469 are separated by 344 nucleotides
B158DRAFT_1464: B158DRAFT_1464 - ferredoxin, 2Fe-2S type, ISC system, at 1,517,495 to 1,517,833
_1464
B158DRAFT_1465: B158DRAFT_1465 - FeS assembly protein IscX, at 1,517,859 to 1,518,053
_1465
B158DRAFT_1466: B158DRAFT_1466 - tRNA_Lys_TTT, at 1,518,174 to 1,518,249
_1466
B158DRAFT_1467: B158DRAFT_1467 - tRNA_Lys_TTT, at 1,518,466 to 1,518,541
_1467
B158DRAFT_1468: B158DRAFT_1468 - Predicted transcriptional regulators, at 1,518,626 to 1,519,354
_1468
B158DRAFT_1469: B158DRAFT_1469 - hypothetical protein, at 1,519,699 to 1,520,340
_1469
Position (kb)
1518
1519
1520 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1517.887 kb on + strand, within B158DRAFT_1465 at 1517.895 kb on - strand, within B158DRAFT_1465 at 1517.895 kb on - strand, within B158DRAFT_1465 at 1517.909 kb on + strand, within B158DRAFT_1465 at 1517.983 kb on - strand, within B158DRAFT_1465 at 1517.986 kb on + strand, within B158DRAFT_1465 at 1517.993 kb on + strand, within B158DRAFT_1465 at 1518.005 kb on + strand, within B158DRAFT_1465 at 1518.011 kb on + strand, within B158DRAFT_1465 at 1518.034 kb on + strand at 1518.034 kb on + strand at 1518.218 kb on + strand, within B158DRAFT_1466 at 1518.259 kb on + strand at 1518.263 kb on + strand at 1518.269 kb on - strand at 1518.269 kb on - strand at 1518.517 kb on + strand, within B158DRAFT_1467 at 1518.529 kb on + strand, within B158DRAFT_1467 at 1518.564 kb on - strand at 1518.566 kb on - strand at 1518.671 kb on + strand at 1518.671 kb on + strand at 1518.671 kb on + strand at 1518.707 kb on + strand, within B158DRAFT_1468 at 1518.727 kb on - strand, within B158DRAFT_1468 at 1518.800 kb on - strand, within B158DRAFT_1468 at 1518.805 kb on - strand, within B158DRAFT_1468 at 1518.817 kb on - strand, within B158DRAFT_1468 at 1518.818 kb on + strand, within B158DRAFT_1468 at 1518.871 kb on + strand, within B158DRAFT_1468 at 1518.886 kb on - strand, within B158DRAFT_1468 at 1518.889 kb on + strand, within B158DRAFT_1468 at 1518.950 kb on + strand, within B158DRAFT_1468 at 1518.950 kb on + strand, within B158DRAFT_1468 at 1518.958 kb on - strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.037 kb on + strand, within B158DRAFT_1468 at 1519.045 kb on - strand, within B158DRAFT_1468 at 1519.045 kb on - strand, within B158DRAFT_1468 at 1519.157 kb on + strand, within B158DRAFT_1468 at 1519.157 kb on + strand, within B158DRAFT_1468 at 1519.157 kb on + strand, within B158DRAFT_1468 at 1519.157 kb on + strand, within B158DRAFT_1468 at 1519.165 kb on - strand, within B158DRAFT_1468 at 1519.185 kb on - strand, within B158DRAFT_1468 at 1519.197 kb on + strand, within B158DRAFT_1468 at 1519.198 kb on - strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.200 kb on + strand, within B158DRAFT_1468 at 1519.208 kb on - strand, within B158DRAFT_1468 at 1519.208 kb on - strand, within B158DRAFT_1468 at 1519.208 kb on - strand, within B158DRAFT_1468 at 1519.208 kb on - strand, within B158DRAFT_1468 at 1519.208 kb on - strand, within B158DRAFT_1468 at 1519.268 kb on - strand, within B158DRAFT_1468 at 1519.268 kb on - strand, within B158DRAFT_1468 at 1519.270 kb on + strand, within B158DRAFT_1468 at 1519.270 kb on + strand, within B158DRAFT_1468 at 1519.270 kb on + strand, within B158DRAFT_1468 at 1519.273 kb on - strand, within B158DRAFT_1468 at 1519.278 kb on - strand, within B158DRAFT_1468 at 1519.278 kb on - strand, within B158DRAFT_1468 at 1519.278 kb on - strand, within B158DRAFT_1468 at 1519.311 kb on - strand at 1519.356 kb on - strand at 1519.499 kb on - strand at 1519.533 kb on - strand at 1519.534 kb on + strand at 1519.534 kb on + strand at 1519.534 kb on + strand at 1519.535 kb on + strand at 1519.542 kb on - strand at 1519.543 kb on - strand at 1519.581 kb on + strand at 1519.591 kb on + strand at 1519.594 kb on - strand at 1519.609 kb on - strand at 1519.735 kb on + strand at 1519.743 kb on + strand at 1519.743 kb on + strand at 1519.743 kb on - strand at 1519.743 kb on - strand at 1519.885 kb on - strand, within B158DRAFT_1469 at 1519.934 kb on + strand, within B158DRAFT_1469 at 1519.979 kb on - strand, within B158DRAFT_1469 at 1520.108 kb on + strand, within B158DRAFT_1469 at 1520.116 kb on - strand, within B158DRAFT_1469 at 1520.166 kb on + strand, within B158DRAFT_1469
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 1,517,887 + B158DRAFT_1465 0.14 +1.9 1,517,895 - B158DRAFT_1465 0.18 +2.4 1,517,895 - B158DRAFT_1465 0.18 +2.3 1,517,909 + B158DRAFT_1465 0.26 +2.3 1,517,983 - B158DRAFT_1465 0.64 +3.0 1,517,986 + B158DRAFT_1465 0.65 +2.6 1,517,993 + B158DRAFT_1465 0.69 +2.2 1,518,005 + B158DRAFT_1465 0.75 +2.7 1,518,011 + B158DRAFT_1465 0.78 +2.3 1,518,034 + +1.2 1,518,034 + +1.9 1,518,218 + B158DRAFT_1466 0.58 +3.2 1,518,259 + -0.3 1,518,263 + +1.3 1,518,269 - -0.5 1,518,269 - -0.1 1,518,517 + B158DRAFT_1467 0.67 +0.2 1,518,529 + B158DRAFT_1467 0.83 -1.2 1,518,564 - -0.2 1,518,566 - -1.9 1,518,671 + -0.3 1,518,671 + -0.2 1,518,671 + -0.3 1,518,707 + B158DRAFT_1468 0.11 -0.0 1,518,727 - B158DRAFT_1468 0.14 -2.2 1,518,800 - B158DRAFT_1468 0.24 -0.3 1,518,805 - B158DRAFT_1468 0.25 -0.9 1,518,817 - B158DRAFT_1468 0.26 +0.5 1,518,818 + B158DRAFT_1468 0.26 -0.2 1,518,871 + B158DRAFT_1468 0.34 +0.2 1,518,886 - B158DRAFT_1468 0.36 +1.9 1,518,889 + B158DRAFT_1468 0.36 -0.6 1,518,950 + B158DRAFT_1468 0.44 +0.8 1,518,950 + B158DRAFT_1468 0.44 -0.3 1,518,958 - B158DRAFT_1468 0.46 +0.5 1,519,037 + B158DRAFT_1468 0.56 -0.3 1,519,037 + B158DRAFT_1468 0.56 -0.6 1,519,037 + B158DRAFT_1468 0.56 -1.5 1,519,037 + B158DRAFT_1468 0.56 +0.0 1,519,037 + B158DRAFT_1468 0.56 -0.5 1,519,037 + B158DRAFT_1468 0.56 -0.6 1,519,045 - B158DRAFT_1468 0.57 -2.5 1,519,045 - B158DRAFT_1468 0.57 -1.1 1,519,157 + B158DRAFT_1468 0.73 +0.0 1,519,157 + B158DRAFT_1468 0.73 -0.8 1,519,157 + B158DRAFT_1468 0.73 -0.9 1,519,157 + B158DRAFT_1468 0.73 +0.2 1,519,165 - B158DRAFT_1468 0.74 +0.3 1,519,185 - B158DRAFT_1468 0.77 -1.2 1,519,197 + B158DRAFT_1468 0.78 +1.2 1,519,198 - B158DRAFT_1468 0.78 -1.3 1,519,200 + B158DRAFT_1468 0.79 +0.1 1,519,200 + B158DRAFT_1468 0.79 -0.4 1,519,200 + B158DRAFT_1468 0.79 -0.6 1,519,200 + B158DRAFT_1468 0.79 -1.0 1,519,200 + B158DRAFT_1468 0.79 -0.4 1,519,200 + B158DRAFT_1468 0.79 +0.7 1,519,200 + B158DRAFT_1468 0.79 -0.6 1,519,200 + B158DRAFT_1468 0.79 -0.2 1,519,200 + B158DRAFT_1468 0.79 +0.0 1,519,200 + B158DRAFT_1468 0.79 -0.7 1,519,208 - B158DRAFT_1468 0.80 -0.4 1,519,208 - B158DRAFT_1468 0.80 -1.2 1,519,208 - B158DRAFT_1468 0.80 -0.9 1,519,208 - B158DRAFT_1468 0.80 -1.3 1,519,208 - B158DRAFT_1468 0.80 +1.5 1,519,268 - B158DRAFT_1468 0.88 -0.1 1,519,268 - B158DRAFT_1468 0.88 -1.5 1,519,270 + B158DRAFT_1468 0.88 +0.6 1,519,270 + B158DRAFT_1468 0.88 +0.9 1,519,270 + B158DRAFT_1468 0.88 +0.4 1,519,273 - B158DRAFT_1468 0.89 -0.5 1,519,278 - B158DRAFT_1468 0.89 -0.6 1,519,278 - B158DRAFT_1468 0.89 -1.2 1,519,278 - B158DRAFT_1468 0.89 -0.8 1,519,311 - +0.0 1,519,356 - +0.1 1,519,499 - -2.3 1,519,533 - -0.1 1,519,534 + -0.6 1,519,534 + +0.7 1,519,534 + +1.0 1,519,535 + -0.2 1,519,542 - +0.5 1,519,543 - +0.6 1,519,581 + -1.4 1,519,591 + -0.8 1,519,594 - +0.7 1,519,609 - -0.7 1,519,735 + -0.3 1,519,743 + -0.8 1,519,743 + -0.6 1,519,743 - +0.8 1,519,743 - +0.6 1,519,885 - B158DRAFT_1469 0.29 +0.5 1,519,934 + B158DRAFT_1469 0.37 +0.8 1,519,979 - B158DRAFT_1469 0.44 -1.1 1,520,108 + B158DRAFT_1469 0.64 -1.2 1,520,116 - B158DRAFT_1469 0.65 -0.8 1,520,166 + B158DRAFT_1469 0.73 -0.6
Or see this region's nucleotide sequence