Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1273

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1271 and B158DRAFT_1272 are separated by 105 nucleotidesB158DRAFT_1272 and B158DRAFT_1273 are separated by 22 nucleotidesB158DRAFT_1273 and B158DRAFT_1274 are separated by 71 nucleotidesB158DRAFT_1274 and B158DRAFT_1275 are separated by 150 nucleotidesB158DRAFT_1275 and B158DRAFT_1276 are separated by 64 nucleotides B158DRAFT_1271: B158DRAFT_1271 - hypothetical protein, at 1,314,162 to 1,314,695 _1271 B158DRAFT_1272: B158DRAFT_1272 - two component transcriptional regulator, LuxR family, at 1,314,801 to 1,315,439 _1272 B158DRAFT_1273: B158DRAFT_1273 - Excinuclease ABC subunit C, at 1,315,462 to 1,317,300 _1273 B158DRAFT_1274: B158DRAFT_1274 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,317,372 to 1,317,938 _1274 B158DRAFT_1275: B158DRAFT_1275 - tRNA_Gly_GCC, at 1,318,089 to 1,318,164 _1275 B158DRAFT_1276: B158DRAFT_1276 - tRNA_Cys_GCA, at 1,318,229 to 1,318,302 _1276 Position (kb) 1315 1316 1317 1318Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1314.481 kb on + strand, within B158DRAFT_1271at 1314.485 kb on + strand, within B158DRAFT_1271at 1314.529 kb on + strand, within B158DRAFT_1271at 1314.535 kb on + strand, within B158DRAFT_1271at 1314.553 kb on - strand, within B158DRAFT_1271at 1314.569 kb on + strand, within B158DRAFT_1271at 1314.577 kb on - strand, within B158DRAFT_1271at 1314.625 kb on + strand, within B158DRAFT_1271at 1314.637 kb on + strand, within B158DRAFT_1271at 1314.712 kb on - strandat 1314.721 kb on - strandat 1314.792 kb on - strandat 1314.826 kb on - strandat 1314.846 kb on + strandat 1314.846 kb on + strandat 1314.846 kb on + strandat 1314.854 kb on - strandat 1314.854 kb on - strandat 1314.854 kb on - strandat 1314.854 kb on - strandat 1314.933 kb on + strand, within B158DRAFT_1272at 1314.934 kb on - strand, within B158DRAFT_1272at 1314.940 kb on + strand, within B158DRAFT_1272at 1315.005 kb on + strand, within B158DRAFT_1272at 1315.021 kb on - strand, within B158DRAFT_1272at 1315.032 kb on - strand, within B158DRAFT_1272at 1315.049 kb on + strand, within B158DRAFT_1272at 1315.054 kb on + strand, within B158DRAFT_1272at 1315.054 kb on + strand, within B158DRAFT_1272at 1315.057 kb on - strand, within B158DRAFT_1272at 1315.061 kb on + strand, within B158DRAFT_1272at 1315.062 kb on - strand, within B158DRAFT_1272at 1315.066 kb on + strand, within B158DRAFT_1272at 1315.069 kb on - strand, within B158DRAFT_1272at 1315.074 kb on - strand, within B158DRAFT_1272at 1315.076 kb on + strand, within B158DRAFT_1272at 1315.097 kb on + strand, within B158DRAFT_1272at 1315.114 kb on - strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.133 kb on + strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.141 kb on - strand, within B158DRAFT_1272at 1315.174 kb on - strand, within B158DRAFT_1272at 1315.296 kb on + strand, within B158DRAFT_1272at 1315.319 kb on + strand, within B158DRAFT_1272at 1315.351 kb on - strand, within B158DRAFT_1272at 1315.440 kb on + strandat 1315.450 kb on + strandat 1315.458 kb on + strandat 1315.458 kb on - strandat 1315.458 kb on - strandat 1315.458 kb on - strandat 1315.464 kb on - strandat 1315.464 kb on - strandat 1315.482 kb on - strandat 1315.575 kb on - strandat 1315.644 kb on + strandat 1315.689 kb on - strand, within B158DRAFT_1273at 1315.712 kb on + strand, within B158DRAFT_1273at 1315.785 kb on + strand, within B158DRAFT_1273at 1315.793 kb on - strand, within B158DRAFT_1273at 1315.793 kb on - strand, within B158DRAFT_1273at 1315.793 kb on - strand, within B158DRAFT_1273at 1315.869 kb on + strand, within B158DRAFT_1273at 1315.890 kb on - strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.006 kb on + strand, within B158DRAFT_1273at 1316.009 kb on - strand, within B158DRAFT_1273at 1316.014 kb on - strand, within B158DRAFT_1273at 1316.014 kb on - strand, within B158DRAFT_1273at 1316.014 kb on - strand, within B158DRAFT_1273at 1316.014 kb on - strand, within B158DRAFT_1273at 1316.046 kb on + strand, within B158DRAFT_1273at 1316.082 kb on + strand, within B158DRAFT_1273at 1316.082 kb on + strand, within B158DRAFT_1273at 1316.090 kb on - strand, within B158DRAFT_1273at 1316.090 kb on - strand, within B158DRAFT_1273at 1316.090 kb on - strand, within B158DRAFT_1273at 1316.200 kb on + strand, within B158DRAFT_1273at 1316.208 kb on - strand, within B158DRAFT_1273at 1316.242 kb on - strand, within B158DRAFT_1273at 1316.253 kb on + strand, within B158DRAFT_1273at 1316.253 kb on + strand, within B158DRAFT_1273at 1316.253 kb on + strand, within B158DRAFT_1273at 1316.253 kb on + strand, within B158DRAFT_1273at 1316.261 kb on + strand, within B158DRAFT_1273at 1316.261 kb on - strand, within B158DRAFT_1273at 1316.271 kb on + strand, within B158DRAFT_1273at 1316.271 kb on + strand, within B158DRAFT_1273at 1316.281 kb on + strand, within B158DRAFT_1273at 1316.311 kb on - strand, within B158DRAFT_1273at 1316.346 kb on - strand, within B158DRAFT_1273at 1316.354 kb on - strand, within B158DRAFT_1273at 1316.447 kb on + strand, within B158DRAFT_1273at 1316.502 kb on + strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.513 kb on + strand, within B158DRAFT_1273at 1316.516 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.531 kb on - strand, within B158DRAFT_1273at 1316.558 kb on - strand, within B158DRAFT_1273at 1316.580 kb on + strand, within B158DRAFT_1273at 1316.588 kb on - strand, within B158DRAFT_1273at 1316.588 kb on - strand, within B158DRAFT_1273at 1316.591 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.688 kb on + strand, within B158DRAFT_1273at 1316.688 kb on + strand, within B158DRAFT_1273at 1316.695 kb on - strand, within B158DRAFT_1273at 1316.695 kb on - strand, within B158DRAFT_1273at 1316.811 kb on - strand, within B158DRAFT_1273at 1316.862 kb on - strand, within B158DRAFT_1273at 1316.901 kb on + strand, within B158DRAFT_1273at 1316.903 kb on - strand, within B158DRAFT_1273at 1316.928 kb on + strand, within B158DRAFT_1273at 1316.936 kb on - strand, within B158DRAFT_1273at 1316.961 kb on + strand, within B158DRAFT_1273at 1316.970 kb on + strand, within B158DRAFT_1273at 1316.986 kb on + strand, within B158DRAFT_1273at 1317.044 kb on - strand, within B158DRAFT_1273at 1317.058 kb on - strand, within B158DRAFT_1273at 1317.099 kb on + strand, within B158DRAFT_1273at 1317.224 kb on + strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.991 kb on + strandat 1317.999 kb on - strandat 1317.999 kb on - strandat 1318.005 kb on - strandat 1318.007 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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1,314,481 + B158DRAFT_1271 0.60 +1.1
1,314,485 + B158DRAFT_1271 0.60 +0.0
1,314,529 + B158DRAFT_1271 0.69 -0.5
1,314,535 + B158DRAFT_1271 0.70 -0.4
1,314,553 - B158DRAFT_1271 0.73 -0.1
1,314,569 + B158DRAFT_1271 0.76 +1.2
1,314,577 - B158DRAFT_1271 0.78 -1.2
1,314,625 + B158DRAFT_1271 0.87 +0.2
1,314,637 + B158DRAFT_1271 0.89 +0.6
1,314,712 - -1.0
1,314,721 - +0.3
1,314,792 - -0.4
1,314,826 - +0.9
1,314,846 + -2.3
1,314,846 + -1.1
1,314,846 + +0.1
1,314,854 - -0.7
1,314,854 - -2.1
1,314,854 - -1.9
1,314,854 - -1.4
1,314,933 + B158DRAFT_1272 0.21 +1.2
1,314,934 - B158DRAFT_1272 0.21 -1.2
1,314,940 + B158DRAFT_1272 0.22 +0.9
1,315,005 + B158DRAFT_1272 0.32 +0.7
1,315,021 - B158DRAFT_1272 0.34 -1.3
1,315,032 - B158DRAFT_1272 0.36 -0.7
1,315,049 + B158DRAFT_1272 0.39 -0.7
1,315,054 + B158DRAFT_1272 0.40 -1.1
1,315,054 + B158DRAFT_1272 0.40 -0.9
1,315,057 - B158DRAFT_1272 0.40 -1.3
1,315,061 + B158DRAFT_1272 0.41 -2.6
1,315,062 - B158DRAFT_1272 0.41 -1.0
1,315,066 + B158DRAFT_1272 0.41 -0.8
1,315,069 - B158DRAFT_1272 0.42 +0.3
1,315,074 - B158DRAFT_1272 0.43 -1.5
1,315,076 + B158DRAFT_1272 0.43 -1.0
1,315,097 + B158DRAFT_1272 0.46 -1.9
1,315,114 - B158DRAFT_1272 0.49 -1.2
1,315,133 + B158DRAFT_1272 0.52 -2.0
1,315,133 + B158DRAFT_1272 0.52 -0.0
1,315,133 + B158DRAFT_1272 0.52 -2.9
1,315,133 + B158DRAFT_1272 0.52 -0.6
1,315,133 + B158DRAFT_1272 0.52 -1.5
1,315,133 + B158DRAFT_1272 0.52 -1.3
1,315,133 + B158DRAFT_1272 0.52 -0.3
1,315,141 - B158DRAFT_1272 0.53 -2.4
1,315,141 - B158DRAFT_1272 0.53 +0.1
1,315,141 - B158DRAFT_1272 0.53 -0.7
1,315,141 - B158DRAFT_1272 0.53 -0.2
1,315,141 - B158DRAFT_1272 0.53 +1.4
1,315,141 - B158DRAFT_1272 0.53 -0.2
1,315,174 - B158DRAFT_1272 0.58 -0.8
1,315,296 + B158DRAFT_1272 0.77 -0.9
1,315,319 + B158DRAFT_1272 0.81 -0.5
1,315,351 - B158DRAFT_1272 0.86 +2.5
1,315,440 + -0.2
1,315,450 + -0.8
1,315,458 + +0.4
1,315,458 - -0.5
1,315,458 - +0.5
1,315,458 - -0.5
1,315,464 - +0.5
1,315,464 - +1.5
1,315,482 - -0.4
1,315,575 - +1.2
1,315,644 + +0.0
1,315,689 - B158DRAFT_1273 0.12 +1.0
1,315,712 + B158DRAFT_1273 0.14 +1.8
1,315,785 + B158DRAFT_1273 0.18 +2.0
1,315,793 - B158DRAFT_1273 0.18 +1.2
1,315,793 - B158DRAFT_1273 0.18 +0.9
1,315,793 - B158DRAFT_1273 0.18 +0.5
1,315,869 + B158DRAFT_1273 0.22 +0.4
1,315,890 - B158DRAFT_1273 0.23 +1.4
1,316,006 + B158DRAFT_1273 0.30 +0.5
1,316,006 + B158DRAFT_1273 0.30 +0.5
1,316,006 + B158DRAFT_1273 0.30 +1.3
1,316,006 + B158DRAFT_1273 0.30 +0.3
1,316,006 + B158DRAFT_1273 0.30 -2.3
1,316,006 + B158DRAFT_1273 0.30 +1.5
1,316,006 + B158DRAFT_1273 0.30 +1.2
1,316,006 + B158DRAFT_1273 0.30 +0.6
1,316,006 + B158DRAFT_1273 0.30 +0.1
1,316,009 - B158DRAFT_1273 0.30 +0.3
1,316,014 - B158DRAFT_1273 0.30 -0.2
1,316,014 - B158DRAFT_1273 0.30 -0.2
1,316,014 - B158DRAFT_1273 0.30 +0.0
1,316,014 - B158DRAFT_1273 0.30 -0.3
1,316,046 + B158DRAFT_1273 0.32 -0.4
1,316,082 + B158DRAFT_1273 0.34 +0.7
1,316,082 + B158DRAFT_1273 0.34 +0.5
1,316,090 - B158DRAFT_1273 0.34 +1.9
1,316,090 - B158DRAFT_1273 0.34 +0.3
1,316,090 - B158DRAFT_1273 0.34 +0.1
1,316,200 + B158DRAFT_1273 0.40 +0.5
1,316,208 - B158DRAFT_1273 0.41 +0.0
1,316,242 - B158DRAFT_1273 0.42 +0.6
1,316,253 + B158DRAFT_1273 0.43 +1.5
1,316,253 + B158DRAFT_1273 0.43 -0.2
1,316,253 + B158DRAFT_1273 0.43 +0.7
1,316,253 + B158DRAFT_1273 0.43 +0.3
1,316,261 + B158DRAFT_1273 0.43 +0.5
1,316,261 - B158DRAFT_1273 0.43 +0.4
1,316,271 + B158DRAFT_1273 0.44 +0.9
1,316,271 + B158DRAFT_1273 0.44 +0.1
1,316,281 + B158DRAFT_1273 0.45 +0.9
1,316,311 - B158DRAFT_1273 0.46 -0.6
1,316,346 - B158DRAFT_1273 0.48 -0.7
1,316,354 - B158DRAFT_1273 0.49 +1.0
1,316,447 + B158DRAFT_1273 0.54 -0.5
1,316,502 + B158DRAFT_1273 0.57 -1.3
1,316,510 - B158DRAFT_1273 0.57 +1.5
1,316,510 - B158DRAFT_1273 0.57 -1.1
1,316,510 - B158DRAFT_1273 0.57 -0.2
1,316,513 + B158DRAFT_1273 0.57 +0.3
1,316,516 - B158DRAFT_1273 0.57 +0.7
1,316,521 - B158DRAFT_1273 0.58 +1.6
1,316,521 - B158DRAFT_1273 0.58 +0.7
1,316,521 - B158DRAFT_1273 0.58 -0.1
1,316,521 - B158DRAFT_1273 0.58 +0.5
1,316,521 - B158DRAFT_1273 0.58 +0.4
1,316,523 + B158DRAFT_1273 0.58 +1.8
1,316,523 + B158DRAFT_1273 0.58 +0.9
1,316,523 + B158DRAFT_1273 0.58 +0.4
1,316,523 + B158DRAFT_1273 0.58 +0.2
1,316,523 + B158DRAFT_1273 0.58 -0.5
1,316,523 + B158DRAFT_1273 0.58 +2.0
1,316,523 + B158DRAFT_1273 0.58 +1.1
1,316,523 + B158DRAFT_1273 0.58 -1.7
1,316,531 - B158DRAFT_1273 0.58 -0.2
1,316,558 - B158DRAFT_1273 0.60 +0.1
1,316,580 + B158DRAFT_1273 0.61 -1.0
1,316,588 - B158DRAFT_1273 0.61 +0.9
1,316,588 - B158DRAFT_1273 0.61 +1.6
1,316,591 + B158DRAFT_1273 0.61 -0.6
1,316,678 + B158DRAFT_1273 0.66 -1.2
1,316,678 + B158DRAFT_1273 0.66 +0.7
1,316,678 + B158DRAFT_1273 0.66 +1.8
1,316,678 + B158DRAFT_1273 0.66 +0.2
1,316,678 + B158DRAFT_1273 0.66 -0.2
1,316,678 + B158DRAFT_1273 0.66 -0.3
1,316,678 + B158DRAFT_1273 0.66 +1.5
1,316,678 + B158DRAFT_1273 0.66 +0.5
1,316,678 + B158DRAFT_1273 0.66 -1.5
1,316,678 + B158DRAFT_1273 0.66 +0.2
1,316,678 + B158DRAFT_1273 0.66 +0.4
1,316,678 + B158DRAFT_1273 0.66 -0.6
1,316,678 + B158DRAFT_1273 0.66 +1.7
1,316,678 + B158DRAFT_1273 0.66 -0.6
1,316,678 + B158DRAFT_1273 0.66 +0.2
1,316,686 - B158DRAFT_1273 0.67 +1.7
1,316,686 - B158DRAFT_1273 0.67 -0.4
1,316,686 - B158DRAFT_1273 0.67 +0.4
1,316,686 - B158DRAFT_1273 0.67 +0.8
1,316,686 - B158DRAFT_1273 0.67 +0.0
1,316,686 - B158DRAFT_1273 0.67 -0.2
1,316,686 - B158DRAFT_1273 0.67 -1.6
1,316,686 - B158DRAFT_1273 0.67 -0.1
1,316,686 - B158DRAFT_1273 0.67 -1.0
1,316,686 - B158DRAFT_1273 0.67 +0.7
1,316,686 - B158DRAFT_1273 0.67 +1.0
1,316,686 - B158DRAFT_1273 0.67 +0.5
1,316,686 - B158DRAFT_1273 0.67 +0.5
1,316,686 - B158DRAFT_1273 0.67 -0.3
1,316,688 + B158DRAFT_1273 0.67 -0.0
1,316,688 + B158DRAFT_1273 0.67 +0.2
1,316,695 - B158DRAFT_1273 0.67 +0.1
1,316,695 - B158DRAFT_1273 0.67 -0.8
1,316,811 - B158DRAFT_1273 0.73 -0.5
1,316,862 - B158DRAFT_1273 0.76 +0.9
1,316,901 + B158DRAFT_1273 0.78 +1.5
1,316,903 - B158DRAFT_1273 0.78 +1.9
1,316,928 + B158DRAFT_1273 0.80 -0.1
1,316,936 - B158DRAFT_1273 0.80 +0.2
1,316,961 + B158DRAFT_1273 0.82 +0.5
1,316,970 + B158DRAFT_1273 0.82 -0.3
1,316,986 + B158DRAFT_1273 0.83 +1.5
1,317,044 - B158DRAFT_1273 0.86 -0.0
1,317,058 - B158DRAFT_1273 0.87 +1.0
1,317,099 + B158DRAFT_1273 0.89 +0.0
1,317,224 + -0.0
1,317,232 - +1.4
1,317,232 - -0.0
1,317,232 - +0.7
1,317,232 - +1.1
1,317,232 - -0.1
1,317,232 - +0.2
1,317,991 + -1.5
1,317,999 - +1.0
1,317,999 - -0.1
1,318,005 - -0.1
1,318,007 + -0.9

Or see this region's nucleotide sequence