Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1243

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1241 and B158DRAFT_1242 are separated by 114 nucleotidesB158DRAFT_1242 and B158DRAFT_1243 are separated by 50 nucleotidesB158DRAFT_1243 and B158DRAFT_1244 are separated by 205 nucleotides B158DRAFT_1241: B158DRAFT_1241 - dihydroorotase (EC 3.5.2.3), at 1,277,548 to 1,278,588 _1241 B158DRAFT_1242: B158DRAFT_1242 - lactoylglutathione lyase, at 1,278,703 to 1,279,095 _1242 B158DRAFT_1243: B158DRAFT_1243 - hypothetical protein, at 1,279,146 to 1,279,439 _1243 B158DRAFT_1244: B158DRAFT_1244 - Rhombo-CTERM domain, at 1,279,645 to 1,284,237 _1244 Position (kb) 1279 1280Strain fitness (log2 ratio) -3 -2 -1 0 1at 1278.679 kb on + strandat 1278.811 kb on + strand, within B158DRAFT_1242at 1278.814 kb on + strand, within B158DRAFT_1242at 1278.820 kb on + strand, within B158DRAFT_1242at 1278.852 kb on + strand, within B158DRAFT_1242at 1278.852 kb on + strand, within B158DRAFT_1242at 1278.852 kb on + strand, within B158DRAFT_1242at 1278.852 kb on + strand, within B158DRAFT_1242at 1278.852 kb on + strand, within B158DRAFT_1242at 1278.860 kb on - strand, within B158DRAFT_1242at 1278.860 kb on - strand, within B158DRAFT_1242at 1278.860 kb on - strand, within B158DRAFT_1242at 1278.860 kb on - strand, within B158DRAFT_1242at 1278.906 kb on + strand, within B158DRAFT_1242at 1278.906 kb on + strand, within B158DRAFT_1242at 1278.914 kb on - strand, within B158DRAFT_1242at 1278.948 kb on + strand, within B158DRAFT_1242at 1278.948 kb on + strand, within B158DRAFT_1242at 1278.989 kb on - strand, within B158DRAFT_1242at 1279.019 kb on + strand, within B158DRAFT_1242at 1279.027 kb on + strand, within B158DRAFT_1242at 1279.053 kb on - strand, within B158DRAFT_1242at 1279.156 kb on + strandat 1279.241 kb on - strand, within B158DRAFT_1243at 1279.323 kb on + strand, within B158DRAFT_1243at 1279.512 kb on + strandat 1279.512 kb on + strandat 1279.512 kb on + strandat 1279.515 kb on + strandat 1279.520 kb on - strandat 1279.520 kb on - strandat 1279.525 kb on - strandat 1279.594 kb on + strandat 1279.595 kb on - strandat 1279.645 kb on - strandat 1279.645 kb on - strandat 1279.647 kb on + strandat 1279.674 kb on + strandat 1279.687 kb on + strandat 1279.838 kb on + strandat 1279.853 kb on + strandat 1279.879 kb on + strandat 1279.886 kb on + strandat 1279.887 kb on - strandat 1279.992 kb on - strandat 1279.994 kb on - strandat 1280.001 kb on + strandat 1280.001 kb on + strandat 1280.009 kb on - strandat 1280.009 kb on - strandat 1280.019 kb on - strandat 1280.019 kb on - strandat 1280.050 kb on + strandat 1280.114 kb on - strand, within B158DRAFT_1244at 1280.296 kb on - strand, within B158DRAFT_1244at 1280.424 kb on + strand, within B158DRAFT_1244

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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1,278,679 + -0.4
1,278,811 + B158DRAFT_1242 0.27 -0.5
1,278,814 + B158DRAFT_1242 0.28 +0.3
1,278,820 + B158DRAFT_1242 0.30 +0.2
1,278,852 + B158DRAFT_1242 0.38 -0.2
1,278,852 + B158DRAFT_1242 0.38 -0.8
1,278,852 + B158DRAFT_1242 0.38 -0.6
1,278,852 + B158DRAFT_1242 0.38 -0.7
1,278,852 + B158DRAFT_1242 0.38 -1.2
1,278,860 - B158DRAFT_1242 0.40 -0.0
1,278,860 - B158DRAFT_1242 0.40 +0.0
1,278,860 - B158DRAFT_1242 0.40 -0.1
1,278,860 - B158DRAFT_1242 0.40 -0.0
1,278,906 + B158DRAFT_1242 0.52 +0.6
1,278,906 + B158DRAFT_1242 0.52 +0.3
1,278,914 - B158DRAFT_1242 0.54 +0.4
1,278,948 + B158DRAFT_1242 0.62 -0.3
1,278,948 + B158DRAFT_1242 0.62 +0.1
1,278,989 - B158DRAFT_1242 0.73 +0.0
1,279,019 + B158DRAFT_1242 0.80 +1.1
1,279,027 + B158DRAFT_1242 0.82 -0.4
1,279,053 - B158DRAFT_1242 0.89 -0.5
1,279,156 + -0.3
1,279,241 - B158DRAFT_1243 0.32 -0.8
1,279,323 + B158DRAFT_1243 0.60 -1.9
1,279,512 + -0.0
1,279,512 + +0.0
1,279,512 + +0.3
1,279,515 + +0.2
1,279,520 - -0.4
1,279,520 - -0.4
1,279,525 - -0.0
1,279,594 + -0.1
1,279,595 - -3.1
1,279,645 - -0.1
1,279,645 - -0.7
1,279,647 + +1.1
1,279,674 + +0.4
1,279,687 + +0.1
1,279,838 + +0.4
1,279,853 + +0.2
1,279,879 + -0.7
1,279,886 + -0.1
1,279,887 - -0.4
1,279,992 - -0.5
1,279,994 - -0.4
1,280,001 + -0.7
1,280,001 + -0.2
1,280,009 - -0.4
1,280,009 - -0.2
1,280,019 - +0.0
1,280,019 - -0.9
1,280,050 + -1.2
1,280,114 - B158DRAFT_1244 0.10 +0.3
1,280,296 - B158DRAFT_1244 0.14 +0.5
1,280,424 + B158DRAFT_1244 0.17 -0.0

Or see this region's nucleotide sequence