Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1168 and B158DRAFT_1169 overlap by 4 nucleotides B158DRAFT_1169 and B158DRAFT_1170 are separated by 158 nucleotides B158DRAFT_1170 and B158DRAFT_1171 overlap by 4 nucleotides
B158DRAFT_1168: B158DRAFT_1168 - Predicted permeases, at 1,208,300 to 1,209,415
_1168
B158DRAFT_1169: B158DRAFT_1169 - Predicted permeases, at 1,209,412 to 1,210,476
_1169
B158DRAFT_1170: B158DRAFT_1170 - Predicted methyltransferase, at 1,210,635 to 1,211,297
_1170
B158DRAFT_1171: B158DRAFT_1171 - Predicted membrane protein/domain, at 1,211,294 to 1,211,770
_1171
Position (kb)
1209
1210
1211 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1210.471 kb on + strand at 1210.471 kb on + strand at 1210.479 kb on - strand at 1210.487 kb on + strand at 1210.487 kb on + strand at 1210.487 kb on + strand at 1210.487 kb on + strand at 1210.487 kb on + strand at 1210.489 kb on + strand at 1210.604 kb on + strand at 1210.604 kb on + strand at 1210.604 kb on + strand at 1210.604 kb on + strand at 1210.612 kb on - strand at 1210.612 kb on - strand at 1210.612 kb on - strand at 1210.708 kb on - strand, within B158DRAFT_1170 at 1210.796 kb on + strand, within B158DRAFT_1170 at 1210.796 kb on + strand, within B158DRAFT_1170 at 1210.804 kb on - strand, within B158DRAFT_1170 at 1210.804 kb on - strand, within B158DRAFT_1170 at 1210.804 kb on - strand, within B158DRAFT_1170 at 1210.822 kb on - strand, within B158DRAFT_1170 at 1210.904 kb on + strand, within B158DRAFT_1170 at 1210.910 kb on + strand, within B158DRAFT_1170 at 1210.918 kb on - strand, within B158DRAFT_1170 at 1210.967 kb on + strand, within B158DRAFT_1170 at 1210.975 kb on - strand, within B158DRAFT_1170 at 1210.979 kb on + strand, within B158DRAFT_1170 at 1210.979 kb on + strand, within B158DRAFT_1170 at 1211.023 kb on - strand, within B158DRAFT_1170 at 1211.033 kb on + strand, within B158DRAFT_1170 at 1211.078 kb on + strand, within B158DRAFT_1170 at 1211.078 kb on + strand, within B158DRAFT_1170 at 1211.083 kb on + strand, within B158DRAFT_1170 at 1211.083 kb on + strand, within B158DRAFT_1170 at 1211.083 kb on + strand, within B158DRAFT_1170 at 1211.086 kb on - strand, within B158DRAFT_1170 at 1211.086 kb on - strand, within B158DRAFT_1170 at 1211.091 kb on - strand, within B158DRAFT_1170 at 1211.217 kb on - strand, within B158DRAFT_1170 at 1211.252 kb on + strand at 1211.253 kb on + strand at 1211.276 kb on - strand at 1211.321 kb on - strand at 1211.334 kb on + strand at 1211.334 kb on + strand at 1211.342 kb on - strand, within B158DRAFT_1171 at 1211.344 kb on + strand, within B158DRAFT_1171 at 1211.352 kb on - strand, within B158DRAFT_1171 at 1211.352 kb on - strand, within B158DRAFT_1171 at 1211.394 kb on + strand, within B158DRAFT_1171 at 1211.431 kb on + strand, within B158DRAFT_1171 at 1211.431 kb on + strand, within B158DRAFT_1171 at 1211.431 kb on + strand, within B158DRAFT_1171 at 1211.431 kb on + strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.439 kb on - strand, within B158DRAFT_1171 at 1211.464 kb on - strand, within B158DRAFT_1171
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 1,210,471 + -0.7 1,210,471 + +0.0 1,210,479 - +0.1 1,210,487 + -0.5 1,210,487 + -0.2 1,210,487 + +0.2 1,210,487 + -0.6 1,210,487 + +0.2 1,210,489 + +0.3 1,210,604 + -0.2 1,210,604 + +0.0 1,210,604 + +0.0 1,210,604 + -1.3 1,210,612 - -0.5 1,210,612 - +0.1 1,210,612 - -0.4 1,210,708 - B158DRAFT_1170 0.11 +0.0 1,210,796 + B158DRAFT_1170 0.24 -0.2 1,210,796 + B158DRAFT_1170 0.24 -2.1 1,210,804 - B158DRAFT_1170 0.25 +0.1 1,210,804 - B158DRAFT_1170 0.25 +1.6 1,210,804 - B158DRAFT_1170 0.25 -0.1 1,210,822 - B158DRAFT_1170 0.28 -0.2 1,210,904 + B158DRAFT_1170 0.41 +0.6 1,210,910 + B158DRAFT_1170 0.41 -0.2 1,210,918 - B158DRAFT_1170 0.43 +0.7 1,210,967 + B158DRAFT_1170 0.50 -0.3 1,210,975 - B158DRAFT_1170 0.51 -0.2 1,210,979 + B158DRAFT_1170 0.52 -0.9 1,210,979 + B158DRAFT_1170 0.52 -1.7 1,211,023 - B158DRAFT_1170 0.59 -0.5 1,211,033 + B158DRAFT_1170 0.60 -0.9 1,211,078 + B158DRAFT_1170 0.67 -0.2 1,211,078 + B158DRAFT_1170 0.67 +0.2 1,211,083 + B158DRAFT_1170 0.68 +0.3 1,211,083 + B158DRAFT_1170 0.68 +0.1 1,211,083 + B158DRAFT_1170 0.68 -2.7 1,211,086 - B158DRAFT_1170 0.68 -0.7 1,211,086 - B158DRAFT_1170 0.68 -2.5 1,211,091 - B158DRAFT_1170 0.69 +0.1 1,211,217 - B158DRAFT_1170 0.88 +0.4 1,211,252 + +1.9 1,211,253 + -0.9 1,211,276 - -3.0 1,211,321 - -0.8 1,211,334 + +0.1 1,211,334 + -0.9 1,211,342 - B158DRAFT_1171 0.10 +0.1 1,211,344 + B158DRAFT_1171 0.10 +1.1 1,211,352 - B158DRAFT_1171 0.12 +1.0 1,211,352 - B158DRAFT_1171 0.12 +0.7 1,211,394 + B158DRAFT_1171 0.21 +0.9 1,211,431 + B158DRAFT_1171 0.29 +2.0 1,211,431 + B158DRAFT_1171 0.29 +1.0 1,211,431 + B158DRAFT_1171 0.29 +0.8 1,211,431 + B158DRAFT_1171 0.29 +1.5 1,211,439 - B158DRAFT_1171 0.30 +1.2 1,211,439 - B158DRAFT_1171 0.30 +1.3 1,211,439 - B158DRAFT_1171 0.30 +1.2 1,211,439 - B158DRAFT_1171 0.30 +0.9 1,211,439 - B158DRAFT_1171 0.30 +1.4 1,211,439 - B158DRAFT_1171 0.30 +0.6 1,211,464 - B158DRAFT_1171 0.36 +0.2
Or see this region's nucleotide sequence