Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1059

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1057 and B158DRAFT_1058 overlap by 14 nucleotidesB158DRAFT_1058 and B158DRAFT_1059 are separated by 1 nucleotidesB158DRAFT_1059 and B158DRAFT_1060 are separated by 94 nucleotides B158DRAFT_1057: B158DRAFT_1057 - TIGR01620 family protein, at 1,097,679 to 1,098,761 _1057 B158DRAFT_1058: B158DRAFT_1058 - ABC-type Na+ transport system, ATPase component, at 1,098,748 to 1,099,545 _1058 B158DRAFT_1059: B158DRAFT_1059 - ABC-type Na+ efflux pump, permease component, at 1,099,547 to 1,100,791 _1059 B158DRAFT_1060: B158DRAFT_1060 - FOG: LysM repeat, at 1,100,886 to 1,102,430 _1060 Position (kb) 1099 1100 1101Strain fitness (log2 ratio) -1 0 1 2at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.619 kb on - strand, within B158DRAFT_1057at 1098.823 kb on - strandat 1098.848 kb on - strand, within B158DRAFT_1058at 1098.850 kb on + strand, within B158DRAFT_1058at 1098.889 kb on - strand, within B158DRAFT_1058at 1098.889 kb on - strand, within B158DRAFT_1058at 1098.959 kb on - strand, within B158DRAFT_1058at 1099.054 kb on + strand, within B158DRAFT_1058at 1099.076 kb on + strand, within B158DRAFT_1058at 1099.179 kb on + strand, within B158DRAFT_1058at 1099.263 kb on + strand, within B158DRAFT_1058at 1099.268 kb on + strand, within B158DRAFT_1058at 1099.270 kb on + strand, within B158DRAFT_1058at 1099.351 kb on - strand, within B158DRAFT_1058at 1099.483 kb on + strandat 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.991 kb on + strand, within B158DRAFT_1059at 1100.026 kb on + strand, within B158DRAFT_1059at 1100.034 kb on - strand, within B158DRAFT_1059at 1100.034 kb on - strand, within B158DRAFT_1059at 1100.155 kb on + strand, within B158DRAFT_1059at 1100.473 kb on - strand, within B158DRAFT_1059at 1100.531 kb on + strand, within B158DRAFT_1059at 1100.539 kb on - strand, within B158DRAFT_1059at 1100.544 kb on - strand, within B158DRAFT_1059at 1100.565 kb on + strand, within B158DRAFT_1059at 1100.573 kb on - strand, within B158DRAFT_1059at 1100.671 kb on + strandat 1100.671 kb on + strandat 1100.679 kb on - strandat 1100.679 kb on - strandat 1100.758 kb on - strandat 1100.878 kb on - strandat 1100.987 kb on + strandat 1100.987 kb on + strandat 1100.987 kb on + strandat 1101.013 kb on + strandat 1101.023 kb on + strandat 1101.023 kb on + strandat 1101.024 kb on + strandat 1101.031 kb on - strandat 1101.097 kb on + strand, within B158DRAFT_1060at 1101.102 kb on + strand, within B158DRAFT_1060at 1101.102 kb on + strand, within B158DRAFT_1060at 1101.110 kb on - strand, within B158DRAFT_1060at 1101.173 kb on - strand, within B158DRAFT_1060at 1101.326 kb on + strand, within B158DRAFT_1060at 1101.335 kb on + strand, within B158DRAFT_1060at 1101.343 kb on - strand, within B158DRAFT_1060at 1101.371 kb on + strand, within B158DRAFT_1060at 1101.384 kb on - strand, within B158DRAFT_1060at 1101.428 kb on + strand, within B158DRAFT_1060at 1101.472 kb on - strand, within B158DRAFT_1060at 1101.472 kb on - strand, within B158DRAFT_1060at 1101.473 kb on - strand, within B158DRAFT_1060at 1101.483 kb on + strand, within B158DRAFT_1060at 1101.491 kb on - strand, within B158DRAFT_1060at 1101.517 kb on - strand, within B158DRAFT_1060at 1101.528 kb on + strand, within B158DRAFT_1060at 1101.538 kb on + strand, within B158DRAFT_1060at 1101.577 kb on + strand, within B158DRAFT_1060at 1101.577 kb on + strand, within B158DRAFT_1060at 1101.585 kb on - strand, within B158DRAFT_1060at 1101.585 kb on - strand, within B158DRAFT_1060at 1101.651 kb on + strand, within B158DRAFT_1060at 1101.659 kb on - strand, within B158DRAFT_1060at 1101.698 kb on + strand, within B158DRAFT_1060at 1101.706 kb on - strand, within B158DRAFT_1060at 1101.706 kb on - strand, within B158DRAFT_1060at 1101.708 kb on - strand, within B158DRAFT_1060

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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1,098,611 + B158DRAFT_1057 0.86 -0.2
1,098,611 + B158DRAFT_1057 0.86 -0.3
1,098,611 + B158DRAFT_1057 0.86 -0.6
1,098,619 - B158DRAFT_1057 0.87 -1.4
1,098,823 - +0.6
1,098,848 - B158DRAFT_1058 0.13 +0.8
1,098,850 + B158DRAFT_1058 0.13 +0.5
1,098,889 - B158DRAFT_1058 0.18 +0.4
1,098,889 - B158DRAFT_1058 0.18 +0.3
1,098,959 - B158DRAFT_1058 0.26 -1.1
1,099,054 + B158DRAFT_1058 0.38 +1.2
1,099,076 + B158DRAFT_1058 0.41 +1.1
1,099,179 + B158DRAFT_1058 0.54 +0.5
1,099,263 + B158DRAFT_1058 0.65 +0.5
1,099,268 + B158DRAFT_1058 0.65 +0.6
1,099,270 + B158DRAFT_1058 0.65 -1.5
1,099,351 - B158DRAFT_1058 0.76 -0.1
1,099,483 + +0.5
1,099,725 + B158DRAFT_1059 0.14 -1.0
1,099,725 + B158DRAFT_1059 0.14 -0.9
1,099,725 + B158DRAFT_1059 0.14 +0.7
1,099,725 + B158DRAFT_1059 0.14 -1.0
1,099,725 + B158DRAFT_1059 0.14 +0.1
1,099,725 + B158DRAFT_1059 0.14 -0.1
1,099,733 - B158DRAFT_1059 0.15 -0.3
1,099,733 - B158DRAFT_1059 0.15 -0.2
1,099,733 - B158DRAFT_1059 0.15 +0.9
1,099,733 - B158DRAFT_1059 0.15 +0.0
1,099,733 - B158DRAFT_1059 0.15 -0.8
1,099,991 + B158DRAFT_1059 0.36 +0.7
1,100,026 + B158DRAFT_1059 0.38 +1.3
1,100,034 - B158DRAFT_1059 0.39 -0.2
1,100,034 - B158DRAFT_1059 0.39 +0.8
1,100,155 + B158DRAFT_1059 0.49 +0.8
1,100,473 - B158DRAFT_1059 0.74 +0.5
1,100,531 + B158DRAFT_1059 0.79 -0.2
1,100,539 - B158DRAFT_1059 0.80 +0.3
1,100,544 - B158DRAFT_1059 0.80 +1.7
1,100,565 + B158DRAFT_1059 0.82 +0.6
1,100,573 - B158DRAFT_1059 0.82 +0.6
1,100,671 + +0.6
1,100,671 + +0.6
1,100,679 - +0.5
1,100,679 - +0.1
1,100,758 - +0.5
1,100,878 - +1.0
1,100,987 + +1.1
1,100,987 + +0.1
1,100,987 + +1.5
1,101,013 + +0.6
1,101,023 + -0.3
1,101,023 + +1.7
1,101,024 + +2.0
1,101,031 - +2.0
1,101,097 + B158DRAFT_1060 0.14 +1.6
1,101,102 + B158DRAFT_1060 0.14 +1.3
1,101,102 + B158DRAFT_1060 0.14 +1.7
1,101,110 - B158DRAFT_1060 0.14 +1.5
1,101,173 - B158DRAFT_1060 0.19 +1.3
1,101,326 + B158DRAFT_1060 0.28 +1.7
1,101,335 + B158DRAFT_1060 0.29 +1.6
1,101,343 - B158DRAFT_1060 0.30 +1.3
1,101,371 + B158DRAFT_1060 0.31 +1.8
1,101,384 - B158DRAFT_1060 0.32 +1.2
1,101,428 + B158DRAFT_1060 0.35 +1.4
1,101,472 - B158DRAFT_1060 0.38 +1.4
1,101,472 - B158DRAFT_1060 0.38 +2.1
1,101,473 - B158DRAFT_1060 0.38 +1.7
1,101,483 + B158DRAFT_1060 0.39 +0.8
1,101,491 - B158DRAFT_1060 0.39 +0.8
1,101,517 - B158DRAFT_1060 0.41 +1.6
1,101,528 + B158DRAFT_1060 0.42 +2.4
1,101,538 + B158DRAFT_1060 0.42 +0.2
1,101,577 + B158DRAFT_1060 0.45 +1.3
1,101,577 + B158DRAFT_1060 0.45 +1.3
1,101,585 - B158DRAFT_1060 0.45 +1.3
1,101,585 - B158DRAFT_1060 0.45 +1.9
1,101,651 + B158DRAFT_1060 0.50 +1.5
1,101,659 - B158DRAFT_1060 0.50 +1.1
1,101,698 + B158DRAFT_1060 0.53 +0.7
1,101,706 - B158DRAFT_1060 0.53 +1.1
1,101,706 - B158DRAFT_1060 0.53 +0.9
1,101,708 - B158DRAFT_1060 0.53 +1.2

Or see this region's nucleotide sequence