Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0977 and B158DRAFT_0978 are separated by 149 nucleotides B158DRAFT_0978 and B158DRAFT_0979 are separated by 27 nucleotides
B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997
_0977
B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036
_0978
B158DRAFT_0979: B158DRAFT_0979 - DNA topoisomerase IV, A subunit, proteobacterial, at 1,010,064 to 1,012,304
_0979
Position (kb)
1008
1009
1010
1011 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1007.178 kb on - strand at 1007.184 kb on - strand at 1007.231 kb on + strand at 1007.231 kb on + strand at 1007.239 kb on - strand at 1007.270 kb on - strand, within B158DRAFT_0977 at 1007.373 kb on + strand, within B158DRAFT_0977 at 1007.376 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.381 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.424 kb on - strand, within B158DRAFT_0977 at 1007.462 kb on - strand, within B158DRAFT_0977 at 1007.478 kb on - strand, within B158DRAFT_0977 at 1007.563 kb on - strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.572 kb on + strand, within B158DRAFT_0977 at 1007.604 kb on - strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.630 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.888 kb on + strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.915 kb on + strand at 1007.915 kb on + strand at 1007.923 kb on - strand at 1008.017 kb on - strand at 1008.024 kb on + strand at 1008.027 kb on - strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 1,007,178 - +1.0 1,007,184 - -1.2 1,007,231 + -0.1 1,007,231 + -2.2 1,007,239 - -1.3 1,007,270 - B158DRAFT_0977 0.12 -0.6 1,007,373 + B158DRAFT_0977 0.24 -0.4 1,007,376 + B158DRAFT_0977 0.25 -0.6 1,007,378 + B158DRAFT_0977 0.25 -1.2 1,007,378 + B158DRAFT_0977 0.25 -1.4 1,007,378 + B158DRAFT_0977 0.25 -1.0 1,007,378 + B158DRAFT_0977 0.25 -1.6 1,007,378 + B158DRAFT_0977 0.25 -0.9 1,007,381 - B158DRAFT_0977 0.25 -1.5 1,007,386 - B158DRAFT_0977 0.26 -3.2 1,007,386 - B158DRAFT_0977 0.26 -0.4 1,007,386 - B158DRAFT_0977 0.26 -1.8 1,007,386 - B158DRAFT_0977 0.26 -1.1 1,007,386 - B158DRAFT_0977 0.26 -0.5 1,007,386 - B158DRAFT_0977 0.26 -2.2 1,007,386 - B158DRAFT_0977 0.26 -0.3 1,007,386 - B158DRAFT_0977 0.26 -1.0 1,007,386 - B158DRAFT_0977 0.26 -0.7 1,007,386 - B158DRAFT_0977 0.26 -1.1 1,007,386 - B158DRAFT_0977 0.26 -2.6 1,007,424 - B158DRAFT_0977 0.30 +0.2 1,007,462 - B158DRAFT_0977 0.35 -0.2 1,007,478 - B158DRAFT_0977 0.37 -0.6 1,007,563 - B158DRAFT_0977 0.47 -1.5 1,007,567 + B158DRAFT_0977 0.48 -0.9 1,007,567 + B158DRAFT_0977 0.48 -2.2 1,007,572 + B158DRAFT_0977 0.48 -0.9 1,007,604 - B158DRAFT_0977 0.52 -0.6 1,007,606 + B158DRAFT_0977 0.52 -1.0 1,007,606 + B158DRAFT_0977 0.52 -1.2 1,007,606 + B158DRAFT_0977 0.52 -1.7 1,007,614 - B158DRAFT_0977 0.53 +0.6 1,007,614 - B158DRAFT_0977 0.53 +2.6 1,007,614 - B158DRAFT_0977 0.53 -0.3 1,007,614 - B158DRAFT_0977 0.53 -0.1 1,007,630 + B158DRAFT_0977 0.55 -1.6 1,007,754 + B158DRAFT_0977 0.70 -0.8 1,007,754 + B158DRAFT_0977 0.70 -0.1 1,007,762 - B158DRAFT_0977 0.71 -2.3 1,007,762 - B158DRAFT_0977 0.71 +0.4 1,007,762 - B158DRAFT_0977 0.71 -1.4 1,007,888 + B158DRAFT_0977 0.87 -2.1 1,007,896 - B158DRAFT_0977 0.88 -0.8 1,007,896 - B158DRAFT_0977 0.88 -0.7 1,007,896 - B158DRAFT_0977 0.88 -0.4 1,007,915 + -0.6 1,007,915 + -0.9 1,007,923 - -1.1 1,008,017 - -1.3 1,008,024 + +0.2 1,008,027 - -1.3 1,008,029 + -2.6 1,008,029 + -0.1 1,008,029 + -0.9 1,008,029 + +0.6 1,008,029 + -0.3 1,008,037 - -0.2 1,008,037 - -0.6 1,008,037 - -0.5 1,008,037 - -1.3
Or see this region's nucleotide sequence