Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0975 and B158DRAFT_0976 are separated by 32 nucleotides B158DRAFT_0976 and B158DRAFT_0977 are separated by 40 nucleotides B158DRAFT_0977 and B158DRAFT_0978 are separated by 149 nucleotides
B158DRAFT_0975: B158DRAFT_0975 - nudix-type nucleoside diphosphatase, YffH/AdpP family, at 1,006,012 to 1,006,623
_0975
B158DRAFT_0976: B158DRAFT_0976 - Uncharacterized protein conserved in bacteria, at 1,006,656 to 1,007,132
_0976
B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997
_0977
B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036
_0978
Position (kb)
1007
1008 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1006.199 kb on - strand, within B158DRAFT_0975 at 1006.214 kb on + strand, within B158DRAFT_0975 at 1006.219 kb on + strand, within B158DRAFT_0975 at 1006.227 kb on - strand, within B158DRAFT_0975 at 1006.246 kb on + strand, within B158DRAFT_0975 at 1006.254 kb on - strand, within B158DRAFT_0975 at 1006.254 kb on - strand, within B158DRAFT_0975 at 1006.259 kb on - strand, within B158DRAFT_0975 at 1006.264 kb on - strand, within B158DRAFT_0975 at 1006.287 kb on + strand, within B158DRAFT_0975 at 1006.305 kb on - strand, within B158DRAFT_0975 at 1006.307 kb on + strand, within B158DRAFT_0975 at 1006.335 kb on + strand, within B158DRAFT_0975 at 1006.338 kb on - strand, within B158DRAFT_0975 at 1006.339 kb on - strand, within B158DRAFT_0975 at 1006.379 kb on + strand, within B158DRAFT_0975 at 1006.385 kb on + strand, within B158DRAFT_0975 at 1006.394 kb on - strand, within B158DRAFT_0975 at 1006.400 kb on + strand, within B158DRAFT_0975 at 1006.411 kb on - strand, within B158DRAFT_0975 at 1006.411 kb on - strand, within B158DRAFT_0975 at 1006.428 kb on + strand, within B158DRAFT_0975 at 1006.488 kb on + strand, within B158DRAFT_0975 at 1006.645 kb on + strand at 1006.653 kb on + strand at 1006.653 kb on + strand at 1006.653 kb on - strand at 1006.694 kb on + strand at 1006.694 kb on + strand at 1006.702 kb on - strand at 1006.702 kb on - strand at 1006.739 kb on + strand, within B158DRAFT_0976 at 1006.752 kb on + strand, within B158DRAFT_0976 at 1006.758 kb on + strand, within B158DRAFT_0976 at 1006.814 kb on + strand, within B158DRAFT_0976 at 1006.822 kb on + strand, within B158DRAFT_0976 at 1006.822 kb on - strand, within B158DRAFT_0976 at 1006.858 kb on + strand, within B158DRAFT_0976 at 1006.858 kb on + strand, within B158DRAFT_0976 at 1006.866 kb on - strand, within B158DRAFT_0976 at 1006.866 kb on - strand, within B158DRAFT_0976 at 1006.866 kb on - strand, within B158DRAFT_0976 at 1006.866 kb on - strand, within B158DRAFT_0976 at 1006.877 kb on + strand, within B158DRAFT_0976 at 1006.885 kb on - strand, within B158DRAFT_0976 at 1006.963 kb on + strand, within B158DRAFT_0976 at 1006.963 kb on - strand, within B158DRAFT_0976 at 1006.970 kb on - strand, within B158DRAFT_0976 at 1007.062 kb on + strand, within B158DRAFT_0976 at 1007.090 kb on + strand at 1007.178 kb on - strand at 1007.184 kb on - strand at 1007.231 kb on + strand at 1007.231 kb on + strand at 1007.239 kb on - strand at 1007.270 kb on - strand, within B158DRAFT_0977 at 1007.373 kb on + strand, within B158DRAFT_0977 at 1007.376 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.378 kb on + strand, within B158DRAFT_0977 at 1007.381 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.386 kb on - strand, within B158DRAFT_0977 at 1007.424 kb on - strand, within B158DRAFT_0977 at 1007.462 kb on - strand, within B158DRAFT_0977 at 1007.478 kb on - strand, within B158DRAFT_0977 at 1007.563 kb on - strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.567 kb on + strand, within B158DRAFT_0977 at 1007.572 kb on + strand, within B158DRAFT_0977 at 1007.604 kb on - strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.606 kb on + strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.614 kb on - strand, within B158DRAFT_0977 at 1007.630 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.754 kb on + strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.762 kb on - strand, within B158DRAFT_0977 at 1007.888 kb on + strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.896 kb on - strand, within B158DRAFT_0977 at 1007.915 kb on + strand at 1007.915 kb on + strand at 1007.923 kb on - strand at 1008.017 kb on - strand at 1008.024 kb on + strand at 1008.027 kb on - strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.029 kb on + strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand at 1008.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 1,006,199 - B158DRAFT_0975 0.31 -0.2 1,006,214 + B158DRAFT_0975 0.33 +2.3 1,006,219 + B158DRAFT_0975 0.34 -0.9 1,006,227 - B158DRAFT_0975 0.35 +0.0 1,006,246 + B158DRAFT_0975 0.38 +0.0 1,006,254 - B158DRAFT_0975 0.40 -2.4 1,006,254 - B158DRAFT_0975 0.40 +0.4 1,006,259 - B158DRAFT_0975 0.40 -3.2 1,006,264 - B158DRAFT_0975 0.41 +0.2 1,006,287 + B158DRAFT_0975 0.45 +0.8 1,006,305 - B158DRAFT_0975 0.48 -1.8 1,006,307 + B158DRAFT_0975 0.48 +0.2 1,006,335 + B158DRAFT_0975 0.53 +0.3 1,006,338 - B158DRAFT_0975 0.53 +1.5 1,006,339 - B158DRAFT_0975 0.53 -0.2 1,006,379 + B158DRAFT_0975 0.60 -1.0 1,006,385 + B158DRAFT_0975 0.61 +0.4 1,006,394 - B158DRAFT_0975 0.62 +0.1 1,006,400 + B158DRAFT_0975 0.63 +0.9 1,006,411 - B158DRAFT_0975 0.65 -0.8 1,006,411 - B158DRAFT_0975 0.65 -1.0 1,006,428 + B158DRAFT_0975 0.68 -0.5 1,006,488 + B158DRAFT_0975 0.78 +0.9 1,006,645 + +1.4 1,006,653 + +0.3 1,006,653 + +0.5 1,006,653 - -0.6 1,006,694 + +0.4 1,006,694 + +0.3 1,006,702 - -0.0 1,006,702 - +0.2 1,006,739 + B158DRAFT_0976 0.17 +0.6 1,006,752 + B158DRAFT_0976 0.20 -0.4 1,006,758 + B158DRAFT_0976 0.21 +0.2 1,006,814 + B158DRAFT_0976 0.33 -0.3 1,006,822 + B158DRAFT_0976 0.35 +0.7 1,006,822 - B158DRAFT_0976 0.35 +0.7 1,006,858 + B158DRAFT_0976 0.42 +0.3 1,006,858 + B158DRAFT_0976 0.42 -0.6 1,006,866 - B158DRAFT_0976 0.44 +0.4 1,006,866 - B158DRAFT_0976 0.44 +1.3 1,006,866 - B158DRAFT_0976 0.44 +2.1 1,006,866 - B158DRAFT_0976 0.44 -0.5 1,006,877 + B158DRAFT_0976 0.46 -0.4 1,006,885 - B158DRAFT_0976 0.48 -0.3 1,006,963 + B158DRAFT_0976 0.64 -0.2 1,006,963 - B158DRAFT_0976 0.64 -1.9 1,006,970 - B158DRAFT_0976 0.66 +0.4 1,007,062 + B158DRAFT_0976 0.85 +0.1 1,007,090 + +0.1 1,007,178 - +1.0 1,007,184 - -1.2 1,007,231 + -0.1 1,007,231 + -2.2 1,007,239 - -1.3 1,007,270 - B158DRAFT_0977 0.12 -0.6 1,007,373 + B158DRAFT_0977 0.24 -0.4 1,007,376 + B158DRAFT_0977 0.25 -0.6 1,007,378 + B158DRAFT_0977 0.25 -1.2 1,007,378 + B158DRAFT_0977 0.25 -1.4 1,007,378 + B158DRAFT_0977 0.25 -1.0 1,007,378 + B158DRAFT_0977 0.25 -1.6 1,007,378 + B158DRAFT_0977 0.25 -0.9 1,007,381 - B158DRAFT_0977 0.25 -1.5 1,007,386 - B158DRAFT_0977 0.26 -3.2 1,007,386 - B158DRAFT_0977 0.26 -0.4 1,007,386 - B158DRAFT_0977 0.26 -1.8 1,007,386 - B158DRAFT_0977 0.26 -1.1 1,007,386 - B158DRAFT_0977 0.26 -0.5 1,007,386 - B158DRAFT_0977 0.26 -2.2 1,007,386 - B158DRAFT_0977 0.26 -0.3 1,007,386 - B158DRAFT_0977 0.26 -1.0 1,007,386 - B158DRAFT_0977 0.26 -0.7 1,007,386 - B158DRAFT_0977 0.26 -1.1 1,007,386 - B158DRAFT_0977 0.26 -2.6 1,007,424 - B158DRAFT_0977 0.30 +0.2 1,007,462 - B158DRAFT_0977 0.35 -0.2 1,007,478 - B158DRAFT_0977 0.37 -0.6 1,007,563 - B158DRAFT_0977 0.47 -1.5 1,007,567 + B158DRAFT_0977 0.48 -0.9 1,007,567 + B158DRAFT_0977 0.48 -2.2 1,007,572 + B158DRAFT_0977 0.48 -0.9 1,007,604 - B158DRAFT_0977 0.52 -0.6 1,007,606 + B158DRAFT_0977 0.52 -1.0 1,007,606 + B158DRAFT_0977 0.52 -1.2 1,007,606 + B158DRAFT_0977 0.52 -1.7 1,007,614 - B158DRAFT_0977 0.53 +0.6 1,007,614 - B158DRAFT_0977 0.53 +2.6 1,007,614 - B158DRAFT_0977 0.53 -0.3 1,007,614 - B158DRAFT_0977 0.53 -0.1 1,007,630 + B158DRAFT_0977 0.55 -1.6 1,007,754 + B158DRAFT_0977 0.70 -0.8 1,007,754 + B158DRAFT_0977 0.70 -0.1 1,007,762 - B158DRAFT_0977 0.71 -2.3 1,007,762 - B158DRAFT_0977 0.71 +0.4 1,007,762 - B158DRAFT_0977 0.71 -1.4 1,007,888 + B158DRAFT_0977 0.87 -2.1 1,007,896 - B158DRAFT_0977 0.88 -0.8 1,007,896 - B158DRAFT_0977 0.88 -0.7 1,007,896 - B158DRAFT_0977 0.88 -0.4 1,007,915 + -0.6 1,007,915 + -0.9 1,007,923 - -1.1 1,008,017 - -1.3 1,008,024 + +0.2 1,008,027 - -1.3 1,008,029 + -2.6 1,008,029 + -0.1 1,008,029 + -0.9 1,008,029 + +0.6 1,008,029 + -0.3 1,008,037 - -0.2 1,008,037 - -0.6 1,008,037 - -0.5 1,008,037 - -1.3
Or see this region's nucleotide sequence