Experiment: m.b. perchlorate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0731 and B158DRAFT_0732 are separated by 80 nucleotides B158DRAFT_0732 and B158DRAFT_0733 overlap by 11 nucleotides
B158DRAFT_0731: B158DRAFT_0731 - Predicted permease, at 733,839 to 734,885
_0731
B158DRAFT_0732: B158DRAFT_0732 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 734,966 to 736,369
_0732
B158DRAFT_0733: B158DRAFT_0733 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 736,359 to 739,517
_0733
Position (kb) 734
735
736
737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 734.032 kb on - strand, within B158DRAFT_0731 at 734.092 kb on + strand, within B158DRAFT_0731 at 734.165 kb on + strand, within B158DRAFT_0731 at 734.181 kb on - strand, within B158DRAFT_0731 at 734.185 kb on + strand, within B158DRAFT_0731 at 734.185 kb on + strand, within B158DRAFT_0731 at 734.185 kb on + strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.193 kb on - strand, within B158DRAFT_0731 at 734.200 kb on + strand, within B158DRAFT_0731 at 734.200 kb on + strand, within B158DRAFT_0731 at 734.201 kb on - strand, within B158DRAFT_0731 at 734.208 kb on - strand, within B158DRAFT_0731 at 734.300 kb on - strand, within B158DRAFT_0731 at 734.403 kb on - strand, within B158DRAFT_0731 at 734.408 kb on - strand, within B158DRAFT_0731 at 734.439 kb on - strand, within B158DRAFT_0731 at 734.450 kb on + strand, within B158DRAFT_0731 at 734.458 kb on - strand, within B158DRAFT_0731 at 734.463 kb on - strand, within B158DRAFT_0731 at 734.463 kb on - strand, within B158DRAFT_0731 at 734.503 kb on + strand, within B158DRAFT_0731 at 734.601 kb on + strand, within B158DRAFT_0731 at 734.653 kb on - strand, within B158DRAFT_0731 at 734.712 kb on + strand, within B158DRAFT_0731 at 734.713 kb on + strand, within B158DRAFT_0731 at 734.727 kb on - strand, within B158DRAFT_0731 at 734.775 kb on - strand, within B158DRAFT_0731 at 734.778 kb on - strand, within B158DRAFT_0731 at 734.863 kb on + strand at 734.863 kb on + strand at 734.863 kb on + strand at 734.871 kb on - strand at 734.871 kb on - strand at 735.005 kb on - strand at 735.007 kb on + strand at 735.007 kb on + strand at 735.015 kb on + strand at 735.046 kb on + strand at 735.053 kb on - strand at 735.063 kb on - strand at 735.104 kb on + strand at 735.109 kb on + strand, within B158DRAFT_0732 at 735.114 kb on + strand, within B158DRAFT_0732 at 735.122 kb on - strand, within B158DRAFT_0732 at 735.122 kb on - strand, within B158DRAFT_0732 at 735.122 kb on - strand, within B158DRAFT_0732 at 735.122 kb on - strand, within B158DRAFT_0732 at 735.140 kb on - strand, within B158DRAFT_0732 at 735.140 kb on - strand, within B158DRAFT_0732 at 735.157 kb on - strand, within B158DRAFT_0732 at 735.234 kb on - strand, within B158DRAFT_0732 at 735.234 kb on - strand, within B158DRAFT_0732 at 735.241 kb on + strand, within B158DRAFT_0732 at 735.248 kb on + strand, within B158DRAFT_0732 at 735.249 kb on - strand, within B158DRAFT_0732 at 735.253 kb on + strand, within B158DRAFT_0732 at 735.277 kb on - strand, within B158DRAFT_0732 at 735.294 kb on + strand, within B158DRAFT_0732 at 735.302 kb on - strand, within B158DRAFT_0732 at 735.308 kb on + strand, within B158DRAFT_0732 at 735.440 kb on - strand, within B158DRAFT_0732 at 735.477 kb on + strand, within B158DRAFT_0732 at 735.485 kb on - strand, within B158DRAFT_0732 at 735.485 kb on - strand, within B158DRAFT_0732 at 735.521 kb on - strand, within B158DRAFT_0732 at 735.526 kb on - strand, within B158DRAFT_0732 at 735.560 kb on + strand, within B158DRAFT_0732 at 735.605 kb on - strand, within B158DRAFT_0732 at 735.610 kb on - strand, within B158DRAFT_0732 at 735.648 kb on + strand, within B158DRAFT_0732 at 735.656 kb on - strand, within B158DRAFT_0732 at 735.699 kb on + strand, within B158DRAFT_0732 at 735.699 kb on + strand, within B158DRAFT_0732 at 735.699 kb on + strand, within B158DRAFT_0732 at 735.699 kb on + strand, within B158DRAFT_0732 at 735.699 kb on + strand, within B158DRAFT_0732 at 735.707 kb on - strand, within B158DRAFT_0732 at 735.734 kb on + strand, within B158DRAFT_0732 at 735.768 kb on - strand, within B158DRAFT_0732 at 735.768 kb on - strand, within B158DRAFT_0732 at 735.768 kb on - strand, within B158DRAFT_0732 at 735.768 kb on - strand, within B158DRAFT_0732 at 735.878 kb on + strand, within B158DRAFT_0732 at 735.879 kb on + strand, within B158DRAFT_0732 at 735.897 kb on + strand, within B158DRAFT_0732 at 735.897 kb on + strand, within B158DRAFT_0732 at 735.905 kb on - strand, within B158DRAFT_0732 at 735.907 kb on + strand, within B158DRAFT_0732 at 735.918 kb on + strand, within B158DRAFT_0732 at 736.013 kb on + strand, within B158DRAFT_0732 at 736.101 kb on + strand, within B158DRAFT_0732 at 736.234 kb on + strand at 736.241 kb on - strand at 736.262 kb on + strand at 736.274 kb on + strand at 736.302 kb on + strand at 736.353 kb on - strand at 736.382 kb on - strand at 736.448 kb on - strand at 736.489 kb on + strand at 736.489 kb on + strand at 736.494 kb on + strand at 736.497 kb on - strand at 736.502 kb on - strand at 736.507 kb on - strand at 736.507 kb on - strand at 736.507 kb on - strand at 736.537 kb on - strand at 736.653 kb on + strand at 736.680 kb on + strand, within B158DRAFT_0733 at 736.688 kb on - strand, within B158DRAFT_0733 at 736.767 kb on - strand, within B158DRAFT_0733 at 736.786 kb on + strand, within B158DRAFT_0733 at 736.826 kb on - strand, within B158DRAFT_0733 at 736.831 kb on - strand, within B158DRAFT_0733 at 736.853 kb on + strand, within B158DRAFT_0733 at 736.868 kb on + strand, within B158DRAFT_0733 at 736.895 kb on - strand, within B158DRAFT_0733 at 736.895 kb on - strand, within B158DRAFT_0733 at 736.895 kb on - strand, within B158DRAFT_0733 at 736.895 kb on - strand, within B158DRAFT_0733 at 736.912 kb on + strand, within B158DRAFT_0733 at 736.926 kb on + strand, within B158DRAFT_0733 at 736.926 kb on + strand, within B158DRAFT_0733 at 736.939 kb on - strand, within B158DRAFT_0733 at 736.974 kb on + strand, within B158DRAFT_0733 at 736.989 kb on + strand, within B158DRAFT_0733 at 737.031 kb on + strand, within B158DRAFT_0733 at 737.036 kb on + strand, within B158DRAFT_0733 at 737.094 kb on - strand, within B158DRAFT_0733 at 737.152 kb on + strand, within B158DRAFT_0733 at 737.175 kb on - strand, within B158DRAFT_0733 at 737.175 kb on - strand, within B158DRAFT_0733 at 737.197 kb on + strand, within B158DRAFT_0733 at 737.205 kb on - strand, within B158DRAFT_0733 at 737.210 kb on - strand, within B158DRAFT_0733 at 737.250 kb on + strand, within B158DRAFT_0733 at 737.296 kb on + strand, within B158DRAFT_0733 at 737.296 kb on + strand, within B158DRAFT_0733 at 737.309 kb on + strand, within B158DRAFT_0733 at 737.332 kb on - strand, within B158DRAFT_0733 at 737.367 kb on + strand, within B158DRAFT_0733
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM remove 734,032 - B158DRAFT_0731 0.18 -0.7 734,092 + B158DRAFT_0731 0.24 -0.6 734,165 + B158DRAFT_0731 0.31 -0.4 734,181 - B158DRAFT_0731 0.33 +0.5 734,185 + B158DRAFT_0731 0.33 -0.6 734,185 + B158DRAFT_0731 0.33 +0.2 734,185 + B158DRAFT_0731 0.33 -0.7 734,193 - B158DRAFT_0731 0.34 -0.9 734,193 - B158DRAFT_0731 0.34 -1.4 734,193 - B158DRAFT_0731 0.34 -0.7 734,193 - B158DRAFT_0731 0.34 -1.0 734,193 - B158DRAFT_0731 0.34 -0.0 734,193 - B158DRAFT_0731 0.34 -1.4 734,200 + B158DRAFT_0731 0.34 -0.7 734,200 + B158DRAFT_0731 0.34 -0.5 734,201 - B158DRAFT_0731 0.35 -0.4 734,208 - B158DRAFT_0731 0.35 -1.4 734,300 - B158DRAFT_0731 0.44 -0.1 734,403 - B158DRAFT_0731 0.54 -0.5 734,408 - B158DRAFT_0731 0.54 -1.5 734,439 - B158DRAFT_0731 0.57 -0.8 734,450 + B158DRAFT_0731 0.58 -0.3 734,458 - B158DRAFT_0731 0.59 +1.2 734,463 - B158DRAFT_0731 0.60 -0.4 734,463 - B158DRAFT_0731 0.60 +0.1 734,503 + B158DRAFT_0731 0.63 -0.9 734,601 + B158DRAFT_0731 0.73 +0.5 734,653 - B158DRAFT_0731 0.78 -1.3 734,712 + B158DRAFT_0731 0.83 -0.4 734,713 + B158DRAFT_0731 0.83 -0.7 734,727 - B158DRAFT_0731 0.85 -3.0 734,775 - B158DRAFT_0731 0.89 -1.2 734,778 - B158DRAFT_0731 0.90 -0.3 734,863 + +2.3 734,863 + -2.9 734,863 + -0.8 734,871 - -1.4 734,871 - -1.7 735,005 - +0.3 735,007 + -0.6 735,007 + -1.4 735,015 + -1.7 735,046 + -0.7 735,053 - -0.6 735,063 - +0.3 735,104 + -0.0 735,109 + B158DRAFT_0732 0.10 +0.5 735,114 + B158DRAFT_0732 0.11 -0.3 735,122 - B158DRAFT_0732 0.11 +0.2 735,122 - B158DRAFT_0732 0.11 -1.4 735,122 - B158DRAFT_0732 0.11 -1.3 735,122 - B158DRAFT_0732 0.11 -0.7 735,140 - B158DRAFT_0732 0.12 -0.8 735,140 - B158DRAFT_0732 0.12 +1.0 735,157 - B158DRAFT_0732 0.14 +0.8 735,234 - B158DRAFT_0732 0.19 -0.4 735,234 - B158DRAFT_0732 0.19 -1.0 735,241 + B158DRAFT_0732 0.20 -2.0 735,248 + B158DRAFT_0732 0.20 -2.4 735,249 - B158DRAFT_0732 0.20 -0.7 735,253 + B158DRAFT_0732 0.20 -1.7 735,277 - B158DRAFT_0732 0.22 +0.8 735,294 + B158DRAFT_0732 0.23 -1.5 735,302 - B158DRAFT_0732 0.24 -0.3 735,308 + B158DRAFT_0732 0.24 -0.7 735,440 - B158DRAFT_0732 0.34 -0.9 735,477 + B158DRAFT_0732 0.36 -0.8 735,485 - B158DRAFT_0732 0.37 +0.0 735,485 - B158DRAFT_0732 0.37 -0.4 735,521 - B158DRAFT_0732 0.40 -0.8 735,526 - B158DRAFT_0732 0.40 +0.1 735,560 + B158DRAFT_0732 0.42 +0.7 735,605 - B158DRAFT_0732 0.46 -1.1 735,610 - B158DRAFT_0732 0.46 +0.0 735,648 + B158DRAFT_0732 0.49 -1.0 735,656 - B158DRAFT_0732 0.49 -0.8 735,699 + B158DRAFT_0732 0.52 +0.1 735,699 + B158DRAFT_0732 0.52 +0.5 735,699 + B158DRAFT_0732 0.52 -0.3 735,699 + B158DRAFT_0732 0.52 -0.1 735,699 + B158DRAFT_0732 0.52 -0.6 735,707 - B158DRAFT_0732 0.53 -0.5 735,734 + B158DRAFT_0732 0.55 -0.4 735,768 - B158DRAFT_0732 0.57 -1.0 735,768 - B158DRAFT_0732 0.57 -0.8 735,768 - B158DRAFT_0732 0.57 +0.7 735,768 - B158DRAFT_0732 0.57 -0.7 735,878 + B158DRAFT_0732 0.65 -1.5 735,879 + B158DRAFT_0732 0.65 -0.4 735,897 + B158DRAFT_0732 0.66 -0.1 735,897 + B158DRAFT_0732 0.66 -0.9 735,905 - B158DRAFT_0732 0.67 -1.1 735,907 + B158DRAFT_0732 0.67 +0.1 735,918 + B158DRAFT_0732 0.68 -1.5 736,013 + B158DRAFT_0732 0.75 -0.4 736,101 + B158DRAFT_0732 0.81 -0.2 736,234 + +0.1 736,241 - -0.3 736,262 + -0.9 736,274 + -1.1 736,302 + -0.4 736,353 - +0.5 736,382 - -0.2 736,448 - -0.1 736,489 + -1.0 736,489 + -1.9 736,494 + +0.1 736,497 - +1.9 736,502 - -0.7 736,507 - -0.7 736,507 - -0.8 736,507 - +0.2 736,537 - -0.1 736,653 + +0.9 736,680 + B158DRAFT_0733 0.10 -1.0 736,688 - B158DRAFT_0733 0.10 -1.9 736,767 - B158DRAFT_0733 0.13 -0.9 736,786 + B158DRAFT_0733 0.14 +0.4 736,826 - B158DRAFT_0733 0.15 -0.8 736,831 - B158DRAFT_0733 0.15 -1.1 736,853 + B158DRAFT_0733 0.16 -1.2 736,868 + B158DRAFT_0733 0.16 -0.6 736,895 - B158DRAFT_0733 0.17 -0.9 736,895 - B158DRAFT_0733 0.17 -0.1 736,895 - B158DRAFT_0733 0.17 -1.6 736,895 - B158DRAFT_0733 0.17 -0.9 736,912 + B158DRAFT_0733 0.18 -1.0 736,926 + B158DRAFT_0733 0.18 -1.0 736,926 + B158DRAFT_0733 0.18 -0.2 736,939 - B158DRAFT_0733 0.18 +0.5 736,974 + B158DRAFT_0733 0.19 +1.2 736,989 + B158DRAFT_0733 0.20 -0.2 737,031 + B158DRAFT_0733 0.21 -0.5 737,036 + B158DRAFT_0733 0.21 +1.3 737,094 - B158DRAFT_0733 0.23 -0.3 737,152 + B158DRAFT_0733 0.25 -0.4 737,175 - B158DRAFT_0733 0.26 -0.2 737,175 - B158DRAFT_0733 0.26 -1.3 737,197 + B158DRAFT_0733 0.27 -1.4 737,205 - B158DRAFT_0733 0.27 -0.9 737,210 - B158DRAFT_0733 0.27 -0.8 737,250 + B158DRAFT_0733 0.28 +0.3 737,296 + B158DRAFT_0733 0.30 -0.9 737,296 + B158DRAFT_0733 0.30 +0.1 737,309 + B158DRAFT_0733 0.30 -2.2 737,332 - B158DRAFT_0733 0.31 -0.9 737,367 + B158DRAFT_0733 0.32 -0.5
Or see this region's nucleotide sequence