Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0199

Experiment: m.b. perchlorate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0197 and B158DRAFT_0198 are separated by 22 nucleotidesB158DRAFT_0198 and B158DRAFT_0199 are separated by 146 nucleotidesB158DRAFT_0199 and B158DRAFT_0200 are separated by 114 nucleotidesB158DRAFT_0200 and B158DRAFT_0201 are separated by 5 nucleotides B158DRAFT_0197: B158DRAFT_0197 - pyrroline-5-carboxylate reductase, at 203,089 to 203,946 _0197 B158DRAFT_0198: B158DRAFT_0198 - Predicted integral membrane protein, at 203,969 to 204,556 _0198 B158DRAFT_0199: B158DRAFT_0199 - hypothetical protein, at 204,703 to 205,152 _0199 B158DRAFT_0200: B158DRAFT_0200 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 205,267 to 205,899 _0200 B158DRAFT_0201: B158DRAFT_0201 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 205,905 to 207,137 _0201 Position (kb) 204 205 206Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 203.736 kb on + strand, within B158DRAFT_0197at 203.741 kb on + strand, within B158DRAFT_0197at 203.749 kb on + strand, within B158DRAFT_0197at 203.754 kb on - strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.807 kb on + strand, within B158DRAFT_0197at 203.814 kb on + strand, within B158DRAFT_0197at 203.814 kb on + strand, within B158DRAFT_0197at 203.822 kb on - strand, within B158DRAFT_0197at 203.880 kb on + strandat 203.888 kb on + strandat 203.888 kb on - strandat 203.888 kb on - strandat 204.052 kb on - strand, within B158DRAFT_0198at 204.161 kb on + strand, within B158DRAFT_0198at 204.179 kb on + strand, within B158DRAFT_0198at 204.182 kb on - strand, within B158DRAFT_0198at 204.223 kb on + strand, within B158DRAFT_0198at 204.290 kb on - strand, within B158DRAFT_0198at 204.304 kb on + strand, within B158DRAFT_0198at 204.379 kb on + strand, within B158DRAFT_0198at 204.384 kb on + strand, within B158DRAFT_0198at 204.389 kb on + strand, within B158DRAFT_0198at 204.529 kb on - strandat 204.529 kb on - strandat 204.618 kb on - strandat 204.640 kb on + strandat 204.642 kb on - strandat 204.713 kb on - strandat 204.730 kb on - strandat 204.759 kb on + strand, within B158DRAFT_0199at 204.759 kb on + strand, within B158DRAFT_0199at 204.825 kb on - strand, within B158DRAFT_0199at 204.957 kb on + strand, within B158DRAFT_0199at 204.968 kb on + strand, within B158DRAFT_0199at 205.058 kb on - strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.334 kb on + strand, within B158DRAFT_0200at 205.342 kb on - strand, within B158DRAFT_0200at 205.373 kb on + strand, within B158DRAFT_0200at 205.400 kb on + strand, within B158DRAFT_0200at 205.444 kb on - strand, within B158DRAFT_0200at 205.465 kb on + strand, within B158DRAFT_0200at 205.488 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.512 kb on + strand, within B158DRAFT_0200at 205.520 kb on - strand, within B158DRAFT_0200at 205.557 kb on + strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.602 kb on + strand, within B158DRAFT_0200at 205.603 kb on + strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.635 kb on - strand, within B158DRAFT_0200at 205.703 kb on + strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.734 kb on - strand, within B158DRAFT_0200at 205.795 kb on + strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.848 kb on + strandat 205.928 kb on - strandat 205.934 kb on - strandat 205.934 kb on - strandat 206.004 kb on - strandat 206.004 kb on - strandat 206.034 kb on - strand, within B158DRAFT_0201at 206.034 kb on - strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.092 kb on + strand, within B158DRAFT_0201

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 150 mM
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203,736 + B158DRAFT_0197 0.75 +0.2
203,741 + B158DRAFT_0197 0.76 +0.3
203,749 + B158DRAFT_0197 0.77 -0.2
203,754 - B158DRAFT_0197 0.78 +0.2
203,755 + B158DRAFT_0197 0.78 +0.2
203,755 + B158DRAFT_0197 0.78 +1.2
203,755 + B158DRAFT_0197 0.78 +1.0
203,755 + B158DRAFT_0197 0.78 -0.9
203,755 + B158DRAFT_0197 0.78 +0.1
203,755 + B158DRAFT_0197 0.78 -0.2
203,755 + B158DRAFT_0197 0.78 +0.3
203,755 + B158DRAFT_0197 0.78 -0.2
203,755 + B158DRAFT_0197 0.78 +0.4
203,755 + B158DRAFT_0197 0.78 +0.8
203,763 - B158DRAFT_0197 0.79 +0.0
203,763 - B158DRAFT_0197 0.79 +1.3
203,763 - B158DRAFT_0197 0.79 -0.1
203,763 - B158DRAFT_0197 0.79 +1.8
203,763 - B158DRAFT_0197 0.79 -0.5
203,763 - B158DRAFT_0197 0.79 +0.2
203,763 - B158DRAFT_0197 0.79 -2.4
203,763 - B158DRAFT_0197 0.79 -0.5
203,763 - B158DRAFT_0197 0.79 +1.4
203,763 - B158DRAFT_0197 0.79 -0.0
203,763 - B158DRAFT_0197 0.79 +0.7
203,763 - B158DRAFT_0197 0.79 +0.7
203,768 - B158DRAFT_0197 0.79 +0.2
203,768 - B158DRAFT_0197 0.79 -1.1
203,768 - B158DRAFT_0197 0.79 +0.2
203,807 + B158DRAFT_0197 0.84 +0.1
203,814 + B158DRAFT_0197 0.84 +0.7
203,814 + B158DRAFT_0197 0.84 +1.4
203,822 - B158DRAFT_0197 0.85 +0.7
203,880 + +0.3
203,888 + -0.3
203,888 - +0.3
203,888 - +0.3
204,052 - B158DRAFT_0198 0.14 -0.3
204,161 + B158DRAFT_0198 0.33 +0.5
204,179 + B158DRAFT_0198 0.36 -0.1
204,182 - B158DRAFT_0198 0.36 -0.7
204,223 + B158DRAFT_0198 0.43 +0.0
204,290 - B158DRAFT_0198 0.55 +0.2
204,304 + B158DRAFT_0198 0.57 -1.6
204,379 + B158DRAFT_0198 0.70 -0.4
204,384 + B158DRAFT_0198 0.71 -0.6
204,389 + B158DRAFT_0198 0.71 +1.2
204,529 - -0.2
204,529 - -1.0
204,618 - -1.3
204,640 + +0.5
204,642 - -0.9
204,713 - -0.3
204,730 - -1.1
204,759 + B158DRAFT_0199 0.12 -0.3
204,759 + B158DRAFT_0199 0.12 +0.3
204,825 - B158DRAFT_0199 0.27 -0.5
204,957 + B158DRAFT_0199 0.56 -0.7
204,968 + B158DRAFT_0199 0.59 +0.7
205,058 - B158DRAFT_0199 0.79 -0.7
205,085 + B158DRAFT_0199 0.85 -0.1
205,085 + B158DRAFT_0199 0.85 -0.5
205,093 - B158DRAFT_0199 0.87 -0.9
205,093 - B158DRAFT_0199 0.87 -0.9
205,334 + B158DRAFT_0200 0.11 -0.1
205,342 - B158DRAFT_0200 0.12 -0.3
205,373 + B158DRAFT_0200 0.17 -0.1
205,400 + B158DRAFT_0200 0.21 +1.0
205,444 - B158DRAFT_0200 0.28 -1.5
205,465 + B158DRAFT_0200 0.31 -0.9
205,488 + B158DRAFT_0200 0.35 -0.8
205,494 + B158DRAFT_0200 0.36 -0.7
205,494 + B158DRAFT_0200 0.36 -0.6
205,512 + B158DRAFT_0200 0.39 -0.1
205,520 - B158DRAFT_0200 0.40 -0.6
205,557 + B158DRAFT_0200 0.46 -1.2
205,560 - B158DRAFT_0200 0.46 +1.7
205,560 - B158DRAFT_0200 0.46 -0.1
205,565 - B158DRAFT_0200 0.47 -0.6
205,565 - B158DRAFT_0200 0.47 -0.3
205,565 - B158DRAFT_0200 0.47 -0.5
205,602 + B158DRAFT_0200 0.53 -0.8
205,603 + B158DRAFT_0200 0.53 -0.0
205,610 - B158DRAFT_0200 0.54 -0.9
205,610 - B158DRAFT_0200 0.54 +1.3
205,635 - B158DRAFT_0200 0.58 -0.3
205,703 + B158DRAFT_0200 0.69 -1.2
205,711 - B158DRAFT_0200 0.70 +0.2
205,711 - B158DRAFT_0200 0.70 +1.1
205,734 - B158DRAFT_0200 0.74 +0.6
205,795 + B158DRAFT_0200 0.83 -2.0
205,803 - B158DRAFT_0200 0.85 +0.1
205,803 - B158DRAFT_0200 0.85 -0.0
205,803 - B158DRAFT_0200 0.85 +0.2
205,848 + -0.5
205,928 - -0.7
205,934 - -0.9
205,934 - +0.6
206,004 - +0.2
206,004 - -2.3
206,034 - B158DRAFT_0201 0.10 +1.9
206,034 - B158DRAFT_0201 0.10 -0.5
206,036 + B158DRAFT_0201 0.11 +0.4
206,036 + B158DRAFT_0201 0.11 -3.0
206,036 + B158DRAFT_0201 0.11 +0.2
206,036 + B158DRAFT_0201 0.11 -0.3
206,036 + B158DRAFT_0201 0.11 +1.6
206,036 + B158DRAFT_0201 0.11 +1.0
206,044 - B158DRAFT_0201 0.11 +0.8
206,044 - B158DRAFT_0201 0.11 -0.4
206,044 - B158DRAFT_0201 0.11 +1.0
206,044 - B158DRAFT_0201 0.11 -0.2
206,092 + B158DRAFT_0201 0.15 +0.4

Or see this region's nucleotide sequence